Hydra vulgaris (swiftwater hydra): 100210487
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Entry
100210487 CDS
T01080
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 3 isoform X1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100210487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hmg03000
]
100210487
03036 Chromosome and associated proteins [BR:
hmg03036
]
100210487
Transcription factors [BR:
hmg03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
100210487
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
100210487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SAM_1
zf-C2HC
SAM_2
MSL3_chromo-like
zf-FCS_1
SAM_PNT
DUF3381
Motif
Other DBs
NCBI-GeneID:
100210487
NCBI-ProteinID:
XP_047130687
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Position
4:32550457..32579228
Genome browser
AA seq
818 aa
AA seq
DB search
MAKVDSTEDEILKASSVIKDEIKEECEDNIIKRQDKRYTKVEYTNSNNTQKENEDFEKML
RWRKGIGHLQGSSLKFRKSAKGVLEVITPDSDDDDDVDIEDDLDPGEKKSRKRKSIMKNI
DAQIENIEPPHDGVKKKSKKKSIDDESVLKCETCGSFGLITEFRSSGRFCSQRCVGAYAS
RKRAEMIAEQFAKGERQIPKTGRKSGKKTSKHQLSGFDRKLSFIETKENKENVEKDDSYI
YYSTVGFRKPFCWSEYLEITNTKAVSLNTFLKEYAEQDCFPKNEFRQTMKLECVDPKHQS
IICVVSIVEIQGARMRLHFDGWSECYDFWINSDSYFLHPCGWCQKNGQKLTPPRGMDSET
FCWKDYLLLTGSEAAPESCFRKLPSPTHGFQINMKLEAIDRKNPDLVCVASVNNVIAEHF
LVHFDEWDDSYDYWCRDDSPYIHSVGWCEKNGVTLIPPTDEMINKFKWDDYLEQTKTIAA
PSELFKLRKEPVFEVGQKLEVVDPRNPTLIRVATVSECEEYRIKIHFDGWSSIYDYWFDT
DSADLHPINWCKNTGHILEPPRSGYESDILCKTIGCRGIGHIKGAKYTTHHTSFGCPYTI
QNLNKSASPVIDRLAPNASIEESSILNRIHSKKLDSLPDSTTSSHKHPISRPVGRPNKVS
PTTSKITKSKTFKSKKRRGSDEVSSSTPCLNDTPLSQASSLSKTPTFNQTSDINHTHDTS
YSSTFSIKPHTKPISSTHIPAGHPHILTNQCRSSALTWSQEDVAHFLNKLGFQDLVKPFK
ENEIDGQALLLLSQADMVRHLKLKLGPALKIYSEISKL
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagtcgattcaactgaagatgaaattttgaaagcgagctctgtaattaaagat
gaaataaaagaagagtgtgaagataatatcataaagcggcaagacaaaagatacactaaa
gttgaatatacaaactccaataatactcaaaaagaaaatgaagattttgaaaaaatgctt
cgatggaggaagggtattggacatttacaagggagcagtctaaagtttagaaagtctgca
aaaggcgttctagaagtcattactcctgattctgatgatgatgatgatgttgatattgaa
gatgacctcgacccaggagagaaaaagtcaagaaaaagaaagtccattatgaaaaatata
gatgctcaaatagaaaacattgaaccaccacatgatggtgtaaagaaaaaatcaaagaaa
aaaagtattgacgatgagtctgttttaaaatgtgaaacatgtggttcttttggattaatt
acagaatttcgatcttctggtcggttttgtagccaaagatgtgttggtgcttatgctagc
cgaaagcgtgcagaaatgattgcagagcaatttgccaaaggtgagcgccaaattcccaaa
acaggtagaaagtctggtaaaaaaactagcaagcaccagctaagtggttttgatagaaag
ttatcttttattgaaacaaaagaaaataaagaaaatgttgaaaaagatgattcatacata
tattattctactgttggatttagaaaaccattttgttggagtgaatacctggaaattact
aacacaaaggcagtttcactgaacacttttttaaaggaatatgcagaacaagattgcttt
cctaaaaatgagtttcgtcagacaatgaagttagaatgtgttgatccaaaacatcaatca
attatttgtgttgtatcaattgtggaaatacaaggtgcaagaatgcgcttgcattttgat
ggttggtcagagtgttatgatttttggataaattctgattcatattttttacatccttgt
ggttggtgtcagaaaaatggtcaaaagttaacacctccaagaggtatggactcagaaaca
ttttgttggaaagattatcttttgttaacgggatctgaagctgctccagaaagttgtttt
agaaagttgccttctcctactcatggttttcagataaatatgaaactagaggcaatcgat
agaaaaaatcctgatcttgtttgtgtagcttcagtaaacaatgttattgcagaacatttt
ttggttcattttgatgaatgggatgactcatatgattattggtgtagagatgatagtcca
tatattcactcagttggttggtgtgaaaaaaatggagtaacactaattcctcctactgat
gaaatgattaataaatttaaatgggatgactacttagaacagacaaaaacaattgcagct
ccatcggaattatttaaactacgaaaagaaccagtttttgaagttggccaaaaacttgaa
gttgttgatcctagaaaccctacattaattcgcgtggcaacagtttcagagtgtgaagaa
tatcgtattaaaatacattttgatggctggagttctatttatgattactggtttgataca
gattctgcagacctgcatccaattaactggtgtaaaaatactggccatattcttgagcca
cctagatctggttatgaatctgatatactttgtaaaactattggttgcagaggaattgga
cacataaaaggtgccaaatacactacacatcacaccagttttggctgtccttacacaatt
caaaatttaaacaaatctgcatcaccagttattgatagacttgcacccaatgcaagcatt
gaagagagttcaatattaaatcgaatacacagtaaaaaattagattctttacccgattca
acaacaagttctcacaaacacccaatctctcgtccggttggtcgtccaaataaagtctcc
cctactacttcaaagataactaagtctaagacatttaaaagcaagaaaagaaggggaagt
gacgaagtatcatcttctacgccttgtttaaatgatactcctttaagtcaggcgtcctct
ctaagtaaaacacctacttttaatcaaacctctgatattaatcatacgcatgatacaagt
tatagtagtacgttctccataaagcctcatactaaacctatttcatcaacgcacattcct
gctggtcaccctcacattttaactaatcagtgtagaagttctgctttaacatggagccaa
gaagacgttgcccattttctaaataaattaggatttcaagatcttgtaaagcctttcaaa
gaaaatgaaatcgatggtcaagcgttgttactattaagtcaagcagatatggtacgtcat
ttaaagttaaagttaggtcctgctttgaaaatttatagcgagatatccaaactttaa
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