Hydra vulgaris (swiftwater hydra): 100210696
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Entry
100210696 CDS
T01080
Name
(RefSeq) SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100210696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hmg03021
]
100210696
03036 Chromosome and associated proteins [BR:
hmg03036
]
100210696
Transcription machinery [BR:
hmg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100210696
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100210696
PBAF complex
100210696
GBAF(ncBAF) complex
100210696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_1
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
SpeFL
Motif
Other DBs
NCBI-GeneID:
100210696
NCBI-ProteinID:
XP_012555972
UniProt:
T2M958
LinkDB
All DBs
Position
7:complement(24965587..25019533)
Genome browser
AA seq
1087 aa
AA seq
DB search
MAIARKDGGANFRYYEFQDTLDSIESVRQWLLRNSKSFAQGEPPNAKGLCELIKQLVQYQ
EDAFGKNISNPPLTRLPIKVFMDYSPEGSLCHLLSCAFKFKVNQGWRRFDFQSPSRADRN
VEMFLNIERLLKERGFLESRKIYLDPTIDEKQHAKLQDIVKRHQGILVDTKEKCTHIVYS
CPTDAQNDEEWLRPIKKYDKYALVHWWYFPDSYDSWIPLSECDQEPEPTPERSKPWELNG
RWLLDLDVFNEWMNEEDYEIECVDGNIGPFSPQGKGIKRRFRGKSLSEESNVKKRKASSP
EPNGKKKKKSLKNKDELEENDSTLQLPDPEPVPQTVMMPVDESQLSLISKTNVVLDISDN
IPREKDQFTDLSNNRDLSNNRDLSNKERNLENSEKTNENGKYLENDSEIPHDDNVPEQTR
HIVIPSYAAWFNYNSIHAIERRALPEYFNGKNKSKTPEIYIAYRNFMIDSYRLNPTEYLT
ATACRRNLAGDVCAITRVHAFLEQWGLINYQVDSDSRPLPMGPPPTSHFHALADTPSGLQ
PLQPAKSLVSASQQLINLADKKDEADEEKHSDNNFGLRNDIYLTKKNQKSRSAAFKDWTD
QETLLLLEGLELHKDDWNKISEHVGSRTQDECIMHFLKLPIEDPYLENDSTFLGPLAFQP
TPFSQSGNPVMSTVAFLASIVDPRVASAAAKAAVDEFSKLKEEIPSELINAHIEKAQAEL
KQSKIEKDEEESSTDLQNKEGQKDSETCEDSLSELSESDKEKIKKYEGISEGNIKTAAAA
AIAAAAVKAKHLGQVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDKEREILEQQR
QALVKERQQLFMDQLKMQEARASNVPVEIQSHPPSITPVVPSSTPSADERAPASSNCSDL
KRFTENKIPGPDFFQLQMTSARSNSSVSVLSPTSDRISDNSSTSSLVANELMVAKTPLPL
GCIQQDEKKQVSDLPPYSVPPPLPIPAVRGARGGRGSRSKANRANAQVNNDIQQHHPSAP
YLTGGMPPYPGYGGFPGQQIPGMAPGMQGFPPNSMMQPGAGMMPQINPSQFSSGQYPPGL
NSQFPPL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggctatcgcgcgaaaagatggtggagcaaatttcagatattacgaatttcaagatact
ttagattctattgaatctgtaaggcagtggcttttaagaaactcaaaaagttttgctcaa
ggggaacctccaaatgcaaaagggctatgcgagttgattaaacaattagtacaataccag
gaggatgcatttggtaagaacataagtaatcctccattaactagattaccgattaaagtt
tttatggactattctccagaaggttctctgtgtcatctgttatcttgtgcatttaaattc
aaagttaatcaaggatggcgtcgttttgactttcaatcaccttcaagagccgatcgaaat
gttgaaatgtttctcaatatagaaagattgcttaaagaaagggggtttctcgaatcacgt
aaaatctatttagacccaaccatagatgagaagcagcatgctaagttacaagatattgta
aaaagacatcagggtattttagttgacacaaaagaaaagtgtactcatattgtttattca
tgtccaactgatgctcaaaatgatgaggaatggttacgcccaattaaaaagtacgataaa
tatgctctggttcattggtggtactttccagacagttatgattcttggatacctttgagt
gaatgtgatcaagaacctgagcctactccagaacgctcaaaaccatgggagttaaatggt
cgctggttattagatttggatgtgttcaatgaatggatgaatgaagaagattatgaaatt
gaatgtgttgacggaaatatagggccattctctcctcaaggaaaaggaataaaaagaaga
tttagaggaaagtcattaagcgaagagtcaaatgtaaaaaaaagaaaagcttcatctcct
gagcctaatggaaagaagaagaaaaaatctttgaaaaataaagatgaacttgaagaaaat
gattcaactttgcagctacctgatccagagcctgtacctcaaactgttatgatgcctgtg
gatgaatctcaattatctcttatttcaaaaactaatgttgtattggatatatcagataac
attcccagagaaaaagatcagttcacagatcttagcaacaatcgtgatcttagcaacaat
cgcgatcttagcaacaaagaaagaaatttagaaaactcagaaaaaacaaatgaaaatggt
aaatacttagaaaatgattctgaaatcccacatgatgataacgtacctgagcaaactaga
cacattgtaattccaagctatgctgcttggtttaattacaatagtattcatgctattgag
cggagagcacttccagagtattttaatggaaagaacaagtcaaaaactccagaaatctat
atagcttatcgtaattttatgattgactcataccgcttgaatccaacagagtatttgact
gctactgcttgcaggagaaatttagcaggcgacgtatgtgctattacaagagtgcatgct
tttttggaacaatggggattaattaactaccaagtagactcagatagtcgtcctcttcca
atgggacctcctccaacttcacactttcatgccttggctgatactccatctggtctgcaa
ccattgcaacctgcaaagtcacttgtttctgcatcacaacagttaataaatcttgcagac
aagaaagatgaagcagatgaagaaaaacactcagacaataattttggattgagaaatgac
atttatctaacaaaaaaaaatcagaagagtcgctccgctgcttttaaagattggactgat
caagagactctgttgttactggagggcttagagcttcacaaggatgactggaacaagata
tcagaacatgttggatcaagaactcaggatgaatgtattatgcattttcttaaacttcca
attgaagacccttatttggagaatgacagtacttttttaggacctcttgcattccagcca
actccttttagtcaatctggtaatcctgttatgtcaactgtagcttttttagcatcaatc
gttgaccctagagtagctagtgctgctgctaaagcagctgttgatgagttttccaagctc
aaagaagaaatcccaagtgagcttattaatgctcatattgaaaaagcccaagctgagttg
aaacaatctaaaattgaaaaagatgaggaggaatcatctactgatctacaaaataaagaa
ggacagaaagatagtgaaacttgtgaggattctttaagtgagttaagtgaaagtgacaaa
gagaaaataaaaaagtatgaagggatctcagaaggcaacataaaaacagctgctgctgct
gcaattgctgctgctgctgttaaagctaagcaccttggtcaggttgaagagagaaagata
aaaagtcttgtagctctcctagttgaaacacaaatgaagaaactagaaattaaattacgt
catttcgaagaattagaaacgattatggataaagaacgagaaattctagaacaacagcgt
caggccctagtgaaagaacgccaacaattgtttatggaccagttaaaaatgcaagaagca
cgggcttcaaatgttcctgtggaaatacagtctcaccctccatctatcactcctgtagtc
ccttcttctacaccatcggctgatgaaagggctcctgcgagtagtaattgcagtgacttg
aagagatttactgaaaataaaattcctggaccagatttttttcaactccagatgacttct
gcgagatctaattcaagcgtatcagtattgtctcctacaagtgatcgtatttcagacaat
tcatctacgtcatctttagtcgctaatgagttaatggtggcgaaaacacctttaccatta
ggatgcattcagcaagacgagaaaaaacaagtttctgatttgcctccatactctgttccg
ccaccattacctatacctgcagttagaggtgcgcgaggtggccgaggaagtcgttctaaa
gcaaaccgtgcaaatgctcaagttaataacgatatacaacagcatcatccatctgcgcca
tatctgaccggaggtatgcctccatatcctgggtatggaggctttcctggtcaacaaatt
cctggcatggctccagggatgcaagggtttcctcctaactcaatgatgcaaccaggagct
ggaatgatgcctcaaataaatccatctcaattctcatctggtcagtacccaccaggactt
aatagtcaatttccaccactatga
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