KEGG   Hydra vulgaris (swiftwater hydra): 100210696
Entry
100210696         CDS       T01080                                 
Name
(RefSeq) SWI/SNF complex subunit SMARCC2
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
hmg  Hydra vulgaris (swiftwater hydra)
Pathway
hmg03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:hmg00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    100210696
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hmg03021]
    100210696
   03036 Chromosome and associated proteins [BR:hmg03036]
    100210696
Transcription machinery [BR:hmg03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     100210696
Chromosome and associated proteins [BR:hmg03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    100210696
   PBAF complex
    100210696
   GBAF(ncBAF) complex
    100210696
SSDB
Motif
Pfam: SWIRM-assoc_2 SWIRM SWIRM-assoc_1 SWIRM-assoc_3 Myb_DNA-binding Myb_DNA-bind_6 BRCT_2 SpeFL
Other DBs
NCBI-GeneID: 100210696
NCBI-ProteinID: XP_012555972
UniProt: T2M958
LinkDB
Position
7:complement(24965587..25019533)
AA seq 1087 aa
MAIARKDGGANFRYYEFQDTLDSIESVRQWLLRNSKSFAQGEPPNAKGLCELIKQLVQYQ
EDAFGKNISNPPLTRLPIKVFMDYSPEGSLCHLLSCAFKFKVNQGWRRFDFQSPSRADRN
VEMFLNIERLLKERGFLESRKIYLDPTIDEKQHAKLQDIVKRHQGILVDTKEKCTHIVYS
CPTDAQNDEEWLRPIKKYDKYALVHWWYFPDSYDSWIPLSECDQEPEPTPERSKPWELNG
RWLLDLDVFNEWMNEEDYEIECVDGNIGPFSPQGKGIKRRFRGKSLSEESNVKKRKASSP
EPNGKKKKKSLKNKDELEENDSTLQLPDPEPVPQTVMMPVDESQLSLISKTNVVLDISDN
IPREKDQFTDLSNNRDLSNNRDLSNKERNLENSEKTNENGKYLENDSEIPHDDNVPEQTR
HIVIPSYAAWFNYNSIHAIERRALPEYFNGKNKSKTPEIYIAYRNFMIDSYRLNPTEYLT
ATACRRNLAGDVCAITRVHAFLEQWGLINYQVDSDSRPLPMGPPPTSHFHALADTPSGLQ
PLQPAKSLVSASQQLINLADKKDEADEEKHSDNNFGLRNDIYLTKKNQKSRSAAFKDWTD
QETLLLLEGLELHKDDWNKISEHVGSRTQDECIMHFLKLPIEDPYLENDSTFLGPLAFQP
TPFSQSGNPVMSTVAFLASIVDPRVASAAAKAAVDEFSKLKEEIPSELINAHIEKAQAEL
KQSKIEKDEEESSTDLQNKEGQKDSETCEDSLSELSESDKEKIKKYEGISEGNIKTAAAA
AIAAAAVKAKHLGQVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDKEREILEQQR
QALVKERQQLFMDQLKMQEARASNVPVEIQSHPPSITPVVPSSTPSADERAPASSNCSDL
KRFTENKIPGPDFFQLQMTSARSNSSVSVLSPTSDRISDNSSTSSLVANELMVAKTPLPL
GCIQQDEKKQVSDLPPYSVPPPLPIPAVRGARGGRGSRSKANRANAQVNNDIQQHHPSAP
YLTGGMPPYPGYGGFPGQQIPGMAPGMQGFPPNSMMQPGAGMMPQINPSQFSSGQYPPGL
NSQFPPL
NT seq 3264 nt   +upstreamnt  +downstreamnt
atggctatcgcgcgaaaagatggtggagcaaatttcagatattacgaatttcaagatact
ttagattctattgaatctgtaaggcagtggcttttaagaaactcaaaaagttttgctcaa
ggggaacctccaaatgcaaaagggctatgcgagttgattaaacaattagtacaataccag
gaggatgcatttggtaagaacataagtaatcctccattaactagattaccgattaaagtt
tttatggactattctccagaaggttctctgtgtcatctgttatcttgtgcatttaaattc
aaagttaatcaaggatggcgtcgttttgactttcaatcaccttcaagagccgatcgaaat
gttgaaatgtttctcaatatagaaagattgcttaaagaaagggggtttctcgaatcacgt
aaaatctatttagacccaaccatagatgagaagcagcatgctaagttacaagatattgta
aaaagacatcagggtattttagttgacacaaaagaaaagtgtactcatattgtttattca
tgtccaactgatgctcaaaatgatgaggaatggttacgcccaattaaaaagtacgataaa
tatgctctggttcattggtggtactttccagacagttatgattcttggatacctttgagt
gaatgtgatcaagaacctgagcctactccagaacgctcaaaaccatgggagttaaatggt
cgctggttattagatttggatgtgttcaatgaatggatgaatgaagaagattatgaaatt
gaatgtgttgacggaaatatagggccattctctcctcaaggaaaaggaataaaaagaaga
tttagaggaaagtcattaagcgaagagtcaaatgtaaaaaaaagaaaagcttcatctcct
gagcctaatggaaagaagaagaaaaaatctttgaaaaataaagatgaacttgaagaaaat
gattcaactttgcagctacctgatccagagcctgtacctcaaactgttatgatgcctgtg
gatgaatctcaattatctcttatttcaaaaactaatgttgtattggatatatcagataac
attcccagagaaaaagatcagttcacagatcttagcaacaatcgtgatcttagcaacaat
cgcgatcttagcaacaaagaaagaaatttagaaaactcagaaaaaacaaatgaaaatggt
aaatacttagaaaatgattctgaaatcccacatgatgataacgtacctgagcaaactaga
cacattgtaattccaagctatgctgcttggtttaattacaatagtattcatgctattgag
cggagagcacttccagagtattttaatggaaagaacaagtcaaaaactccagaaatctat
atagcttatcgtaattttatgattgactcataccgcttgaatccaacagagtatttgact
gctactgcttgcaggagaaatttagcaggcgacgtatgtgctattacaagagtgcatgct
tttttggaacaatggggattaattaactaccaagtagactcagatagtcgtcctcttcca
atgggacctcctccaacttcacactttcatgccttggctgatactccatctggtctgcaa
ccattgcaacctgcaaagtcacttgtttctgcatcacaacagttaataaatcttgcagac
aagaaagatgaagcagatgaagaaaaacactcagacaataattttggattgagaaatgac
atttatctaacaaaaaaaaatcagaagagtcgctccgctgcttttaaagattggactgat
caagagactctgttgttactggagggcttagagcttcacaaggatgactggaacaagata
tcagaacatgttggatcaagaactcaggatgaatgtattatgcattttcttaaacttcca
attgaagacccttatttggagaatgacagtacttttttaggacctcttgcattccagcca
actccttttagtcaatctggtaatcctgttatgtcaactgtagcttttttagcatcaatc
gttgaccctagagtagctagtgctgctgctaaagcagctgttgatgagttttccaagctc
aaagaagaaatcccaagtgagcttattaatgctcatattgaaaaagcccaagctgagttg
aaacaatctaaaattgaaaaagatgaggaggaatcatctactgatctacaaaataaagaa
ggacagaaagatagtgaaacttgtgaggattctttaagtgagttaagtgaaagtgacaaa
gagaaaataaaaaagtatgaagggatctcagaaggcaacataaaaacagctgctgctgct
gcaattgctgctgctgctgttaaagctaagcaccttggtcaggttgaagagagaaagata
aaaagtcttgtagctctcctagttgaaacacaaatgaagaaactagaaattaaattacgt
catttcgaagaattagaaacgattatggataaagaacgagaaattctagaacaacagcgt
caggccctagtgaaagaacgccaacaattgtttatggaccagttaaaaatgcaagaagca
cgggcttcaaatgttcctgtggaaatacagtctcaccctccatctatcactcctgtagtc
ccttcttctacaccatcggctgatgaaagggctcctgcgagtagtaattgcagtgacttg
aagagatttactgaaaataaaattcctggaccagatttttttcaactccagatgacttct
gcgagatctaattcaagcgtatcagtattgtctcctacaagtgatcgtatttcagacaat
tcatctacgtcatctttagtcgctaatgagttaatggtggcgaaaacacctttaccatta
ggatgcattcagcaagacgagaaaaaacaagtttctgatttgcctccatactctgttccg
ccaccattacctatacctgcagttagaggtgcgcgaggtggccgaggaagtcgttctaaa
gcaaaccgtgcaaatgctcaagttaataacgatatacaacagcatcatccatctgcgcca
tatctgaccggaggtatgcctccatatcctgggtatggaggctttcctggtcaacaaatt
cctggcatggctccagggatgcaagggtttcctcctaactcaatgatgcaaccaggagct
ggaatgatgcctcaaataaatccatctcaattctcatctggtcagtacccaccaggactt
aatagtcaatttccaccactatga

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