KEGG   Hydra vulgaris (swiftwater hydra): 100210847
Entry
100210847         CDS       T01080                                 
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM23
  KO
K07963  tripartite motif-containing protein 23 [EC:2.3.2.27]
Organism
hmg  Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:hmg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hmg04121]
    100210847
  09183 Protein families: signaling and cellular processes
   04031 GTP-binding proteins [BR:hmg04031]
    100210847
Enzymes [BR:hmg01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100210847
Ubiquitin system [BR:hmg04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    100210847
GTP-binding proteins [BR:hmg04031]
 Small (monomeric) G-proteins
  Arf/Sar Family
   Others
    100210847
SSDB
Motif
Pfam: Arf Ras Roc SRPRB G-alpha zf-RING_UBOX zf-RING_5 zf-C3HC4 zf-B_box MMR_HSR1 zf-RING_2 zf-C3HC4_4 zf-C3HC4_2 FeoB_N Sec3_CC ATG17_like
Other DBs
NCBI-GeneID: 100210847
NCBI-ProteinID: XP_002154930
UniProt: A0A8B6XGV2
LinkDB
Position
14:30815998..30842523
AA seq 572 aa
MMNTSFGMKFSFQGLTIRSPLSPGKIQTKSNTLECRICDDLFAQHGEKVPRVLSCGHSIC
HECLSKLQNETVVQCPFDRTSTNLGDAGIWGLKKNFALLELLERLEQLKESKALTEFVDE
ACVTKCDEDDRHQADLFCTVCLTNLCNFCAKETHKSRTLLLHKKIPISEKPRINPPCSLH
CAHILEFACLEESCRESPLMCYICKDYGVHKGHKHVLIEDEAENIRKSIQNALQHVKTFS
AEVTAFSRKLAEISEKIEGGVSISCSNNGEVIQIPVIGNAEIARLRIREYFNELRDTIRQ
QENEALSVVNSYVRENLCSIRQQQEDMAVLISQITHVCSQCDQALLRSDAEVIQARANIV
NLLDAVQQQQQYFTELSELCKEDPEIPFAFTKDNRVHIGPKMEMRVLALGLDNGGKTSIL
FKLKQNEFVSAITTIGFNVETIEHKSVKFTIWDVGGVQKLRPLWRHYYLNTQAVIFVIDS
TNLERLFEAQEELTKLLAEKRLQDALILIYANKQDLPSALSLDDLREKIGIHRLCSGRTW
TLIGCSAHTGTGLNEGLDWLARQFLSEFDNLS
NT seq 1719 nt   +upstreamnt  +downstreamnt
atgatgaatactagttttgggatgaagttctcttttcaaggtctaacgattaggtcacca
ttaagcccgggtaaaattcaaaccaagagtaatactcttgaatgtagaatttgcgatgat
ctatttgcacagcatggtgaaaaagtaccaagagttttatcatgtggtcattctatttgt
catgagtgcttaagtaaattacagaatgagacagttgttcaatgtccttttgatagaaca
tctacaaatttaggagatgctggaatttggggattaaagaaaaactttgcgctattagaa
cttttggaaagactagaacagttgaaagagtcaaaagcacttacagagtttgtagatgaa
gcatgtgtaacaaaatgtgatgaagatgatcgtcaccaagctgatcttttttgcactgta
tgcttaacaaatctttgtaatttttgtgctaaagaaactcataaatctagaacattgctt
cttcacaaaaaaattcctattagtgaaaaaccacgtataaatcctccatgttcattgcat
tgtgctcacattttagagtttgcatgcttagaagagtcttgccgtgaaagccctttaatg
tgttatatatgtaaagattatggagttcataaagggcataagcatgtattaattgaagat
gaagctgaaaacattagaaaatctattcaaaatgcactacaacatgtgaaaacgttttct
gctgaagttactgctttttcaagaaagcttgctgagatatcagaaaaaattgaaggtggt
gtcagcatatcctgctcaaataatggagaggtaatacaaataccggttattggaaatgct
gaaattgcaaggttgcgtattcgagagtattttaatgaattaagggatactattagacag
caagaaaatgaggctttgtcagttgttaacagttatgttcgtgaaaatttatgttcaata
cgacaacaacaagaagacatggcagttttaatttcacaaattactcatgtttgttctcaa
tgtgatcaagctctattgcgaagtgatgctgaggtgattcaagcaagagcaaatattgta
aatcttcttgatgcagtgcagcagcaacagcaatattttacagagctttcagaactttgc
aaagaagatcctgaaatcccgtttgcatttacaaaagacaatcgggtgcacattggacca
aaaatggagatgcgggttctagctttaggtttagataatggtggaaagacatcgattctg
ttcaaacttaagcaaaatgagtttgtttcagcaatcacaacaattggatttaatgttgag
actattgagcataaaagtgttaaatttacgatatgggatgttggtggtgttcaaaagctg
cgtccattatggcggcattactacttaaacacccaagctgtgatattcgtgattgatagt
acgaacttagaacgattatttgaagcacaagaggaattaactaaacttcttgcagaaaaa
agattgcaggatgcactcatattgatatatgctaacaaacaggatttacctagtgctcta
agtcttgatgatctgcgtgaaaaaattggaatacatcgactttgctcaggtcgcacttgg
actttaattggttgcagtgcacatacaggaacagggttaaatgaaggtttagactggttg
gcaagacagtttttgtcagaatttgataatttatcttaa

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