Entry |
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Name |
(RefSeq) E3 ubiquitin-protein ligase TRIM23
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KO |
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Organism |
hmg Hydra vulgaris (swiftwater hydra)
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Brite |
KEGG Orthology (KO) [BR:hmg00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:hmg04121]
100210847
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:hmg04031]
100210847
Enzymes [BR:hmg01000]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100210847
Ubiquitin system [BR:hmg04121]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100210847
GTP-binding proteins [BR:hmg04031]
Small (monomeric) G-proteins
Arf/Sar Family
Others
100210847
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
14:30815998..30842523
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AA seq |
572 aa
MMNTSFGMKFSFQGLTIRSPLSPGKIQTKSNTLECRICDDLFAQHGEKVPRVLSCGHSIC
HECLSKLQNETVVQCPFDRTSTNLGDAGIWGLKKNFALLELLERLEQLKESKALTEFVDE
ACVTKCDEDDRHQADLFCTVCLTNLCNFCAKETHKSRTLLLHKKIPISEKPRINPPCSLH
CAHILEFACLEESCRESPLMCYICKDYGVHKGHKHVLIEDEAENIRKSIQNALQHVKTFS
AEVTAFSRKLAEISEKIEGGVSISCSNNGEVIQIPVIGNAEIARLRIREYFNELRDTIRQ
QENEALSVVNSYVRENLCSIRQQQEDMAVLISQITHVCSQCDQALLRSDAEVIQARANIV
NLLDAVQQQQQYFTELSELCKEDPEIPFAFTKDNRVHIGPKMEMRVLALGLDNGGKTSIL
FKLKQNEFVSAITTIGFNVETIEHKSVKFTIWDVGGVQKLRPLWRHYYLNTQAVIFVIDS
TNLERLFEAQEELTKLLAEKRLQDALILIYANKQDLPSALSLDDLREKIGIHRLCSGRTW
TLIGCSAHTGTGLNEGLDWLARQFLSEFDNLS |
NT seq |
1719 nt +upstreamnt +downstreamnt
atgatgaatactagttttgggatgaagttctcttttcaaggtctaacgattaggtcacca
ttaagcccgggtaaaattcaaaccaagagtaatactcttgaatgtagaatttgcgatgat
ctatttgcacagcatggtgaaaaagtaccaagagttttatcatgtggtcattctatttgt
catgagtgcttaagtaaattacagaatgagacagttgttcaatgtccttttgatagaaca
tctacaaatttaggagatgctggaatttggggattaaagaaaaactttgcgctattagaa
cttttggaaagactagaacagttgaaagagtcaaaagcacttacagagtttgtagatgaa
gcatgtgtaacaaaatgtgatgaagatgatcgtcaccaagctgatcttttttgcactgta
tgcttaacaaatctttgtaatttttgtgctaaagaaactcataaatctagaacattgctt
cttcacaaaaaaattcctattagtgaaaaaccacgtataaatcctccatgttcattgcat
tgtgctcacattttagagtttgcatgcttagaagagtcttgccgtgaaagccctttaatg
tgttatatatgtaaagattatggagttcataaagggcataagcatgtattaattgaagat
gaagctgaaaacattagaaaatctattcaaaatgcactacaacatgtgaaaacgttttct
gctgaagttactgctttttcaagaaagcttgctgagatatcagaaaaaattgaaggtggt
gtcagcatatcctgctcaaataatggagaggtaatacaaataccggttattggaaatgct
gaaattgcaaggttgcgtattcgagagtattttaatgaattaagggatactattagacag
caagaaaatgaggctttgtcagttgttaacagttatgttcgtgaaaatttatgttcaata
cgacaacaacaagaagacatggcagttttaatttcacaaattactcatgtttgttctcaa
tgtgatcaagctctattgcgaagtgatgctgaggtgattcaagcaagagcaaatattgta
aatcttcttgatgcagtgcagcagcaacagcaatattttacagagctttcagaactttgc
aaagaagatcctgaaatcccgtttgcatttacaaaagacaatcgggtgcacattggacca
aaaatggagatgcgggttctagctttaggtttagataatggtggaaagacatcgattctg
ttcaaacttaagcaaaatgagtttgtttcagcaatcacaacaattggatttaatgttgag
actattgagcataaaagtgttaaatttacgatatgggatgttggtggtgttcaaaagctg
cgtccattatggcggcattactacttaaacacccaagctgtgatattcgtgattgatagt
acgaacttagaacgattatttgaagcacaagaggaattaactaaacttcttgcagaaaaa
agattgcaggatgcactcatattgatatatgctaacaaacaggatttacctagtgctcta
agtcttgatgatctgcgtgaaaaaattggaatacatcgactttgctcaggtcgcacttgg
actttaattggttgcagtgcacatacaggaacagggttaaatgaaggtttagactggttg
gcaagacagtttttgtcagaatttgataatttatcttaa |