KEGG   Hydra vulgaris (swiftwater hydra): 100211058
Entry
100211058         CDS       T01080                                 
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
  KO
K14549  U3 small nucleolar RNA-associated protein 15
Organism
hmg  Hydra vulgaris (swiftwater hydra)
Pathway
hmg03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:hmg00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    100211058
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hmg03009]
    100211058
Ribosome biogenesis [BR:hmg03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    100211058
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_WDR3_1st Beta-prop_WDR5 UTP15_C Beta-prop_THOC3 WD40_Prp19 WD40 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz WDR55 Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_Gbeta EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_NOL10_N Beta-prop_ACSF4 ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_CAF1B_HIR1 Beta-prop_SPT8 DSE1_N PAC11 Beta-prop_SCAP Beta-prop_VPS8 WD40_RFWD3 WD_LRWD1 WD40_MABP1-WDR62_2nd Beta-prop_NWD2_C Beta-prop_WDR41 ASA1 TRM82_WD Beta-prop_HPS5 KNTC1_N NBCH_WD40 Beta-prop_Vps41 Beta-prop_IP5PC_F Beta-prop_At4g14310 Beta-prop_WDR75_2nd PEP5_VPS11_N NAD_binding_5
Other DBs
NCBI-GeneID: 100211058
NCBI-ProteinID: XP_002167466
UniProt: T2M897
LinkDB
Position
9:48599231..48619315
AA seq 532 aa
MATDFQKLPRKQFPKTELRTDSKENKQWKLFQFPVIVKEYSAINCVHFSPVEPYNCLVTS
SAKVQIFAPYTNEIIRTSSRSKENVYGARFRLDGKLMVTGGESGTVQVLDVNSRAILRNL
KGHTKPTHVCHFGREHMKVFSASDDKTVRCWDLPTEKETFVVKAHKDYIRSGCINPTSSD
IFISGSYDHKIKMWDLRSPSVAMEMNHGAPIECVIFHQNGSLCISSGGNYINVWDIIAGG
KLYHQFSNHQKTITSLCFNGDYTRLLSGSLDRHVKVYDIEDYSLVANIDYPSPILAMDIS
ADSQHIVVGMSDGAISLRHKKKTLINEKVNRKRSYKVLPGTYLHRIRNRSAKPNKHDVII
RDTFTKKLSKADRHLQKFRYHEALDCVLVTGCDNTEYVISVLTELSRRNALKVALKNRDA
NSLLSIMKFLVRNISCPFYAKILVPIADLVLTMYSSIAGTNKKFDLMLKKLSARIKADLR
TYEEMMKLLGAMEQVFTMITPHTVNTPHTTIMPNANEVASDQNVTDVDFVIE
NT seq 1599 nt   +upstreamnt  +downstreamnt
atggctacagattttcaaaagcttccaagaaaacaatttcctaaaacagaacttagaaca
gattcaaaagaaaataaacaatggaaattatttcagtttcctgttattgttaaagaatat
tcagccatcaattgtgttcatttttctcctgttgaaccttataactgcctggtgacaagt
tctgccaaggtacaaattttcgctccatatacaaatgaaattatacgaacttcttctcga
tcaaaagaaaatgtttatggtgctcggtttagattagatggaaagttaatggtcactgga
ggagagagtggtactgtacaggtattagatgttaacagtagagctattctcagaaattta
aaaggtcatacaaaacccactcatgtgtgtcattttggtcgagaacatatgaaggtattt
tctgcttctgatgataaaactgttcgctgttgggatcttcccactgagaaagaaactttt
gttgtaaaagcccataaggattatataagatctggatgtataaacccaacaagctcagat
atattcattagtgggtcctatgatcacaaaattaaaatgtgggatttacgttcaccttca
gtagctatggagatgaatcatggtgctccaattgagtgtgtaatatttcatcaaaatgga
agtctgtgcatatcctcaggtgggaattatataaacgtttgggacataatcgctggtgga
aaactttatcaccagttctcaaaccatcaaaaaacaataacttcactctgtttcaatggg
gattacactcgcctattatctggatctctagacaggcatgtaaaagtatatgatatagaa
gattattctttggtagcaaatattgattacccatctccaatactagccatggacatttcg
gctgatagtcagcatatagtagtgggtatgtcagatggtgcaatttctctacgtcacaaa
aagaaaactttaataaatgaaaaagttaacaggaagcggtcgtataaagttctgccggga
acttatttgcaccgaatcagaaatcgatcggcaaagccaaataagcatgatgtcattatt
cgtgacacttttactaaaaaactttcaaaagctgatcgtcatttacaaaaatttcgttat
catgaagcactcgattgtgtgttagtcactggctgtgataatacagaatatgtcatcagc
gtgcttactgaattatcaaggagaaatgcattaaaagtagcccttaaaaatagagacgcc
aactcattgctcagcataatgaaatttttagttagaaatatatcttgtccattttacgca
aaaatattggtaccaattgcagatcttgttttaacaatgtactcgtcaatcgctggtaca
aacaaaaagtttgatcttatgttaaaaaagttaagcgcacgcattaaagccgacctacgg
acatatgaagaaatgatgaaattgcttggagctatggagcaagtatttacaatgattaca
cctcatactgttaatacacctcatactacgattatgccaaatgctaatgaagtcgcttca
gatcaaaatgtaactgatgttgattttgtaattgaatga

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