Hydra vulgaris (swiftwater hydra): 100211173
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Entry
100211173 CDS
T01080
Name
(RefSeq) uncharacterized protein LOC100211173 isoform X1
KO
K18763
la-related protein 4
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmg03019
]
100211173
Messenger RNA biogenesis [BR:
hmg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
100211173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
La
Motif
Other DBs
NCBI-GeneID:
100211173
NCBI-ProteinID:
XP_047138507
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Position
8:29867010..29908090
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AA seq
847 aa
AA seq
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MHPRIRLFHVKIWLTALKSKGSELDDDNDDIGYFYCSTHPDNLIAEKICSHKYLEESNST
KHIESEFEDYKYAFDGDTSTDGSVSPDLIPNEGLNVNAPAFTSVKAMPPVIITKSVDMGN
ERWKPNAAVFEENLSNQISLTEVLQPFIGSDGLYYIPTEFVNNFVQPVIIDQLPPESINP
DGFITVSGSELANHTVPNSDKLVNELSIGELKSLIQLQFEYYFSRENLANDAYLVSQMDS
DSYVYISTVAKFNQIRKLTSDMKLIIEALKESPYVQLDETEQKVRANMKRCIVILREIPE
STPIQEVKALFDHPNCPKWSSFEFAHNDSWYVTFECEEDAKRAYRHLREEVQCFKGRPLM
ARIKAKFRFLSSRTSILPKNSSSPSTSSRENSNLPFTITTQPINTTSLVLPSSAVFHGAQ
EFQYYATPLNGTSFLPAQWVGQTNQIINPHEIRPSKASFTKHNGYQHKNLNVQRGYFSAG
KPRQSIRNSLPNNGKVSEGNGISDFDERQMVNKRPVLANGFSPNFKKDDTRFTRNTNTLK
KDPRGNLEESPRFQRLRERRIKEDISTEKSNVSKSMNSDNGNLALDLALEHFPALPSPNS
PNESMGETSLLKDLSSNNLHFIHDKLSLDSSPTTTSDLSFSEASMEQSSSDSDSLITTVS
SHIVTKISYAQMAQKPQNKGHYDGEDKDFCSTLEGSVVSKVDSKSFNTQKTRNSNKTTNI
VPSNIESKKKLEKNIDKNEHMTINSKDTYASKFVQSPSTLPVGQRPKKGHSMSSEALSNS
QNISNIRPLMSQVIKFSDSKTNELSHQKTLNNTIETLKVIPGENYINETVSSVCKVISSE
YEQSNAV
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctcgaattcgactttttcatgtaaaaatatggttgactgctctaaaaagcaaa
ggatcagagttagacgacgataacgatgatattggttacttttattgctccacccatccg
gataatttaatagcagaaaagatatgtagccataaatatttagaagaaagtaacagtact
aaacatatcgaaagcgaatttgaagactacaaatatgcttttgatggagacacatctact
gatggttcggtttctcctgaccttataccaaacgagggtctcaatgtaaacgctccggct
tttacttctgtcaaagctatgccgccagttattatcactaaaagtgttgatatgggtaat
gagcgctggaaaccaaatgcagctgtttttgaagaaaatttgtcaaatcagatttcttta
actgaagttctgcaaccttttattggttcagatggcttgtattacattccaactgaattt
gtaaataactttgtacaacctgtaattatagatcagttgcctcctgaatcaataaatcct
gatggctttattactgtaagtggatctgaattagccaatcatactgttcctaattctgat
aaattggtcaatgagctttcaattggagaattgaagtctttaattcagttacaatttgag
tattatttctccagggaaaatttagctaatgatgcttatttagtttctcaaatggatagt
gattcatatgtttacatttcaactgttgcaaaattcaaccagattcgaaagttaacatca
gatatgaaacttataatagaagctcttaaagagtctccatatgttcagctggatgaaact
gaacagaaggtgcgagctaatatgaaaaggtgtattgttatattgcgtgaaattccagaa
tccacacctattcaagaagtaaaagccctttttgatcacccaaattgtccaaaatggtct
tcttttgagtttgcacataatgacagttggtatgttacttttgaatgtgaggaggatgca
aagcgagcatacagacatttgcgtgaagaagtacagtgtttcaaagggcgacctttaatg
gctcgtataaaggcaaagtttcgttttcttagttctagaacttcgattttacctaagaat
agttccagtccgtctacaagttctagggaaaatagtaatctgcctttcactattacaacc
cagccaataaacaccacttcacttgtgcttccatcaagtgctgttttccatggtgcacag
gaatttcagtattatgcaacaccattgaatggcacatcatttcttcctgcacaatgggtt
ggacaaaccaatcaaataatcaatcctcatgagattcggccaagtaaagcaagctttacc
aaacataatggctaccaacataaaaatcttaatgttcaaagaggttattttagtgctggg
aaacctcgacaatcaattagaaacagcctaccaaacaatggtaaagttagtgagggaaat
ggtatatctgattttgatgagcggcaaatggttaataaaaggcctgttcttgctaatggg
ttttctccaaactttaaaaaagatgatactcgtttcactcgcaatacaaatacccttaaa
aaggatccacgtggaaatttagaagagagtcctcgttttcaaagacttcgtgagcgtcgc
attaaagaagatatttctactgaaaaaagtaatgtttcaaaaagtatgaattctgataat
ggaaatcttgcacttgatctcgcactcgaacattttccggctttaccaagtccgaattct
cccaatgagagtatgggagagacgtccttgttaaaggatctttcatcaaacaatcttcac
ttcatacacgacaaattgtctttagattcctcgcctactactactagcgatctaagtttt
agtgaagcttcaatggagcaaagctcttctgacagcgatagtttaattaccacagtttca
tctcatattgttacgaagattagttatgcccagatggctcaaaaaccacaaaataaagga
cattacgatggagaagataaagacttctgttctacattagaaggaagtgttgtttctaaa
gttgattctaaaagttttaatacacaaaaaactcgtaactcaaacaaaacgacaaatata
gtaccttctaatatagaatcaaaaaaaaaactagaaaaaaacattgataaaaatgaacac
atgacaattaattcaaaggatacttacgcctctaagttcgtccagtcgccaagtacatta
cctgtaggccagcgcccgaagaaaggtcatagtatgtcgagcgaggcattatcgaactct
caaaatatatctaatatacgtcctttaatgagtcaggttattaaattttcagatagcaaa
actaacgaattatctcaccaaaagactttaaataataccatagaaactcttaaagttata
ccgggagaaaactatatcaacgagacagtgtctagtgtttgcaaagtcattagtagtgaa
tacgaacaaagtaatgctgtttaa
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