Hydra vulgaris (swiftwater hydra): 100211375
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Entry
100211375 CDS
T01080
Name
(RefSeq) roundabout homolog 1
KO
K06753
roundabout, axon guidance receptor 1
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hmg04515
]
100211375
Cell adhesion molecules [BR:
hmg04515
]
Immunoglobulin superfamily
ROBO family
100211375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
C1-set
Izumo-Ig
fn3_2
TMEM156
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
100211375
NCBI-ProteinID:
XP_012556570
UniProt:
A0A8B7DEE6
LinkDB
All DBs
Position
4:complement(9714201..9758175)
Genome browser
AA seq
1505 aa
AA seq
DB search
MACNYCILFIYFSSFCFYVFTLENDDPRSPIIRQRPASTNISAGETFQLNCYSYGAPSPT
ILWYKDDKPLNTHVVTETGALVVKNAQKSDEGLYKCIAENPYGKIESPPATVKFIYIDTV
FYQSPVSANTTRLQDHTFRCIAPDGFPIPIVTWLHNGKPLATDNWSLQNDRYVSLLKLTY
LSWKNRGDYQCNASNIAGYTLSNVAVLKVKVPAPVIISKQNLTEVYEGAVAILYCEVQFF
NLYPDRIWTKIDSILPEKERLNYPKDGYLEIKNTKLGDSGIYECTVSNDAGTDKFNNQLR
VFKHPEIKVPPSETSVGVGYKATLDCKVTGGKNPVITWYHLGKAYSNTGFTNDRIYVDSE
SRFVVSQAKISDKGEVYCYANDEEMKWSQKSEPVLLLVIDVLEAPPIVNVSPAVVSDVHE
GGSFSLYCTTGEGNIQLAWYLASKPITVSPTVLLEEIKNGKMLTVKDVTLQDSGIYRCIA
DGKGGSSQAQAHVTILESDNKRPAEVLNVKVSDIQATSAKIFWESSFPNSLAPVTAYIIT
LKKVSTNETSKTIHFDMNSLERVIDNLSPDTLYEFSVAAKNKNGEGIAGLSPQIKTLQIV
TAPMIDKLENVVLNVQVDKITPQSAEVKWDYVNPSRITSYILYYRRVVDKQFKTIILNIN
TSDTHKLESLSSDTQYELQVKAANEKYESQPSPLVSFHTTQVILPKLLTVTLMKFSETEI
IVRWVPPASFEDQIKYYKVICLNASGVPAFPSIEVDSKATIYSLSKMDPNQHYQVSVEAW
LNSGYVVSSKIQIALLRLYKQGDYITSSLILPEDKSSEQSSFLKLVKETWFIVAVGVFLA
LIIFIIIIIIVCCRKKKNSYKYGSKRFESSRGLLQNSRTPDFPSASLSRGGPLRDPNFSW
SESRNGDVFANTSKGTSGITGCCKSKSDSFEEDFPNRVLIKPAKQRVPSESFELRGPKSS
NQDVASVKESNIGVALRNGYMVDAPLNNERQLTRDDLNDRFKSDSNQISRYKAPKSPDNP
VVSLNSENIPKKDSRAQTNSFERRHAEIVRTANKSFPDTQLVNVLETNPQATWKREKDSD
IKTSAKSPGENTLRRMGKAPFKPLPKLEVLNWADGLPDPAKNDGSQQSSPKQSSTASMFG
DNTDLRPESRTSHGGSNGSLNKYPFEKRRRRTSNASSMMSSELYQSEMDPSAYSDVASER
KSKKKIAPPPIDLDGLTSDILLQWADSVTNSSPSSSGSSSPSRLSGISSEGSFYTDADFA
NAVAAVAECNGFSMDYDYSLPGMPSSQPPLSSTRNTKMDKIDQVLAQRSKLRNSKRPEFV
PQISMSNYLTGSSKGPNSGQISSGIPLSTRGRKNLRYGTGFQDVDTASNSSTPLTVSNLM
HHDSSLERSKKPLIVSNQESSLERTNRRRQEHAASLEKSIYKPRNKQSAPDPPLSLTSAL
ERNESINSNSKDSISSSNKHDSEVENKPGTAERLKSKRYINGHSSSNQSTPSTIRSTENE
LQNDY
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atggcatgtaactattgtattctatttatttacttctcttccttctgcttctatgtattt
acacttgaaaatgacgatccacgtagtcctattatcagacaaagaccggcttcaacaaat
atatctgcaggtgaaacctttcagttaaattgctatagctatggtgcaccatctccaaca
attttatggtataaagatgataagcccttaaatactcatgttgttacagaaactggtgca
ctagtggttaagaatgcacaaaaaagtgatgaaggtttatataaatgtattgcagaaaat
ccatacggcaaaattgaaagtcctccagctactgtgaaatttatatatattgacacagta
ttttaccagagtccagtaagtgcaaacacaactcgcttacaggatcacacatttagatgt
atagcaccagatggctttcccatcccaattgtgacttggctgcataacgggaaaccatta
gcaacagacaattggagcttgcaaaatgatcgttatgtttcacttttaaaattgacatat
ttatcatggaaaaatcgtggagactatcaatgtaatgcaagtaatattgcaggatatact
ttgagcaatgtggcagtactcaaagtcaaagtaccagcacctgttattatttcaaaacaa
aatttaactgaagtttatgaaggagctgttgcaattttatattgtgaagtgcaattcttt
aatttatatcctgatcgcatatggactaaaatagatagcattctaccagaaaaagagaga
ttaaattatccaaaagatggctacctagaaattaaaaatactaagttaggtgatagtggt
atttatgagtgcactgtatctaatgatgctggaacagataaattcaataatcaactcaga
gtgttcaaacaccctgaaattaaagttcctccatcagaaacaagtgtaggggttggatat
aaggcaacattagactgcaaagttactggtggaaaaaatccagttattacatggtatcat
cttggaaaagcttatagcaacacaggatttacaaatgacagaatatatgttgatagtgaa
tctcgttttgttgtttcacaagcaaagatttcagataaaggagaagtttattgttatgcc
aatgatgaagaaatgaaatggtcacaaaaatcagagccagttttattgttggttattgat
gttcttgaagctcctccaattgtgaatgtctctcctgcggttgtttctgatgtgcatgaa
ggtggttctttttctttgtattgcacaacaggagaaggtaatatacaactagcatggtat
ttagcaagcaaaccaatcacagttagtccaacagttttattagaagaaataaaaaatgga
aaaatgctaactgttaaggatgttactctgcaggattccggaatatataggtgcattgca
gatggcaaaggaggttcttcacaggctcaagcacatgttactattttagaatctgacaac
aaacgtcctgctgaagtattgaatgtcaaagttagcgatattcaagctacttctgctaaa
atcttttgggaaagtagttttccaaattcacttgctccagtaactgcctatattattaca
ttaaagaaagtatcaaccaatgaaacaagtaaaactattcattttgatatgaattcctta
gagagagtcattgacaatctctcacctgatactttatatgaattttctgttgctgcaaag
aataaaaatggagaaggaatagctggattatcacctcaaatcaagacattgcaaattgtg
acagctcctatgattgataagcttgaaaatgttgtcctaaatgtgcaagttgataaaata
acaccccaaagtgcagaagtaaaatgggattatgtaaacccaagtcgaattacgagctat
attctttattatcggcgagtggtagataagcagtttaaaaccatcatactaaacatcaat
acaagtgatactcataaattagaatccctttcttctgatactcagtatgagttgcaggtt
aaggctgcaaatgaaaagtatgaaagtcaacccagtcccttggtgagctttcatactacc
caagttattcttccaaaattacttactgtaacgttaatgaagttttctgaaactgaaatc
atagtaagatgggtgcctccagctagttttgaagatcaaattaaatattacaaagtaatt
tgtcttaatgcaagtggtgttccagcttttcccagtattgaagttgattcaaaggctaca
atatattctttgtctaaaatggatcctaatcagcattaccaagtcagtgtagaagcgtgg
ttaaattctggttatgttgttagtagtaaaattcagatagctctacttcgtctctataaa
caaggtgattatattacctcctcgctgattcttccagaagataaaagttccgaacaaagt
tcttttttaaaactggttaaagaaacatggtttattgttgctgttggagtttttttggca
ttaatcatttttattattattattataatcgtatgttgcagaaagaaaaaaaacagctat
aaatatggttcgaaacgatttgaaagttcaagaggtttgctgcagaacagtcgtacgcca
gactttccaagtgcaagtcttagtcgaggaggtccgttgcgtgatccaaatttttcctgg
agtgaaagcagaaatggtgatgtattcgcaaatactagcaaaggaacgtctgggataaca
ggatgctgcaaatctaaatcagatagttttgaagaagactttccaaatcgtgtacttatt
aaacctgcaaaacaacgagttccttctgaaagttttgaattgagaggacccaagtctagt
aatcaagatgtcgcgtcagttaaagagagtaacattggggtggctctaagaaacggatat
atggtagatgctcctttgaataatgaacgtcaattaacgagagatgatttaaacgatcgt
tttaaaagtgattcaaatcagatttctcgttacaaagcacctaaatcgccagataatcca
gttgtttcactgaactctgaaaatataccaaaaaaggattctcgtgctcaaactaattct
tttgaacgtcgtcatgctgagattgtgcgcacagcaaacaaatcatttccagacacgcaa
cttgtaaatgtcttggaaactaaccctcaagcaacatggaaacgagaaaaagattctgat
atcaaaacaagtgctaaatctccaggagaaaatactttacgacgaatgggcaaagctcct
tttaaacctttacccaaactagaagttttgaattgggcagatggattacctgaccctgca
aagaatgacggaagccagcaatcatctcctaagcagtcttcaacggcatctatgtttggt
gataacacagatttgcgcccagaatctcgaacatctcatggtggttctaatgggtcttta
aataaatatccttttgaaaaacgacgtcgtcgcacatcaaatgcttcatccatgatgtct
tcagaattgtatcaatcagaaatggatccttctgcttatagtgatgtagcttcagaacgt
aaatcaaagaaaaaaattgctcctcctccaatcgatcttgatggattaacaagtgatata
cttttacaatgggctgatagtgtgactaattcaagtcctagcagtagtggctcttcctcg
cctagtcggttaagtggtatcagcagtgaaggatcgttctacacagatgctgattttgca
aacgctgttgctgctgttgctgaatgcaatggttttagtatggactacgattattcgttg
cctggcatgcctagttcccagcccccactttcttctacaagaaatactaaaatggataaa
attgatcaagtcttagctcaacgatctaagttaagaaatagtaagcgcccggagtttgtc
ccacagatttctatgagtaactatcttactgggtcatcaaaaggtccaaatagtgggcaa
atatcgtcaggaattcctctttcaacacgcggtcgtaaaaatcttcggtacggtacaggt
tttcaagacgttgatactgcatcaaattcctcaactcctttaactgttagcaatttaatg
caccatgactcgagtttggaacgttcaaaaaaaccattaattgtttcaaatcaggaatca
agtctagaaagaactaaccgtcgtcgacaagagcatgcggcttctcttgagaaaagcatt
tataaacctcgaaacaaacaatcagctcctgatcctcccttatctttaacttctgcttta
gagcgaaacgaatcgattaattcaaattcaaaggactctattagttcatcaaataagcac
gacagtgaggtagaaaataaaccagggactgctgaaagattaaaatctaaaaggtacatt
aacggtcatagttcaagcaatcaaagtactcctagcacaataagatcaaccgaaaatgaa
ttacaaaatgattactaa
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