Hydra vulgaris (swiftwater hydra): 100211564
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Entry
100211564 CDS
T01080
Name
(RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03015
mRNA surveillance pathway
hmg04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100211564
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100211564
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hmg01009
]
100211564
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmg03019
]
100211564
03036 Chromosome and associated proteins [BR:
hmg03036
]
100211564
Protein phosphatases and associated proteins [BR:
hmg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
100211564
Messenger RNA biogenesis [BR:
hmg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
100211564
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
100211564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
P2R3B_EF-hand
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
EF-hand_8
DUF4187
Motif
Other DBs
NCBI-GeneID:
100211564
NCBI-ProteinID:
XP_002166391
LinkDB
All DBs
Position
4:complement(27713003..27750499)
Genome browser
AA seq
552 aa
AA seq
DB search
MTMKPLLKQKVDELFLHWFSEVSTQSLLRKELQIIQLNSLSTSIKASSPINNSITGLNLN
NRPSSPPIPPNSPTLTPRRSRSKLNSHISACPRKSLLKSFHDQTGFYPGCAKNLKQFFYP
FGQPQLNESNALTLKKLNIAFDKFSNNEAYLRDFPTLTKLCGYPLYWKYALFSACGGKKD
LPITRNKFIATWKKIQHSYHDDASRFYHMLAKNSELGLQKTDFEGLLQDIINTHPGLQFL
QEAPEFHSRYITTVIARIFYILNRSYSGSITLVELRRSNFLLALKRIEEEEDINLVIDYF
SYEHFYVIYCKFWELDTDHDMLINKQDLSKYSNGVISKKMINRLFDGGVTRNCIKDGKMT
YEGFVWFILSEVDKNTQSGIEYWFRCMDLDGDGIISIYEMEHFYQDQLIKMSDMGIEALS
FNDCLCQILDLVKPEKDSMITLRDIKKCKLASVFYNTFFNFNKWLEHEQKDPIQLSKIAG
QSDSVWDQYVITEYELLVAEEGIAQNENDDEEERDEEERDDVFYQTNNSFDDYVGASFNL
MAMVTNNRDSAF
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgactatgaagccattgttaaaacaaaaagtggatgaactgtttcttcactggttttct
gaagtttcaactcaaagccttcttagaaaagagttacaaattatacagttaaattcactt
tctacttctataaaagcttcatcgccaataaataattcaataactggattgaatttaaat
aatagacctagttcacccccaatccctccaaacagccctaccttaacaccaagaagatca
agaagtaagcttaattctcatatttcagcatgtcctagaaagagtttgctaaaaagtttt
catgatcaaactggattttatcctggctgtgccaaaaatttaaagcagtttttttatcca
tttggtcaaccacaattgaatgaaagtaatgctttgactttaaaaaaattaaatattgca
tttgataaattttcaaacaatgaagcctatctacgcgattttccgactttaactaaattg
tgtggttatccactttactggaagtatgcacttttttctgcttgcggaggaaagaaagat
ttgccaatcactcgaaacaagtttattgcaacatggaaaaaaatccagcactcttatcat
gatgatgcttcaagattttatcatatgctagctaaaaatagtgaacttgggcttcagaaa
acagattttgaaggtcttttacaggatataattaacactcatcccggtcttcaatttcta
caagaagcaccagaatttcattccagatatattacaactgttattgcaagaatcttttat
attttaaatcgatcatatagtggaagtattacactagttgaattgcggagaagcaatttt
ttattggcattaaaacgtattgaagaagaagaagatataaatctggtgattgattatttt
tcttatgagcatttttatgtcatatattgtaaattttgggagcttgacactgatcatgat
atgttaatcaataaacaagatctttctaagtactcaaatggagtaatttcaaaaaagatg
attaatcgtttatttgatggtggcgttacaaggaattgcataaaagatgggaaaatgact
tatgaaggttttgtttggtttattctttcggaggtagataagaatacacaaagtggaata
gaatattggttcagatgtatggatttggatggagacggcattatttccatttatgaaatg
gagcatttttatcaggaccaacttatcaaaatgtcagatatgggaatagaagctttaagt
tttaatgactgcttatgtcagattttggatttagtaaaaccagaaaaagattctatgatt
actcttcgtgacattaaaaaatgcaagcttgcatcagttttttacaatactttttttaat
tttaataaatggttggagcatgaacaaaaagatccaattcaactatcgaaaattgctgga
caaagtgatagtgtttgggatcagtatgttattacagaatatgagttgttagtcgctgaa
gaaggtatcgcgcagaatgaaaatgatgacgaagaagagcgcgacgaagaagagcgcgat
gacgtcttttaccaaacaaataattcgtttgatgattatgttggagctagtttcaactta
atggcaatggtaactaataatcgggatagtgcattttag
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