Hydra vulgaris (swiftwater hydra): 100211878
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Entry
100211878 CDS
T01080
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hmg03009
]
100211878
Enzymes [BR:
hmg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100211878
Ribosome biogenesis [BR:
hmg03009
]
Eukaryotic type
90S particles
Helicases
100211878
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
GTP_CH_N
Motif
Other DBs
NCBI-GeneID:
100211878
NCBI-ProteinID:
XP_047128376
LinkDB
All DBs
Position
3:complement(19227885..19299895)
Genome browser
AA seq
743 aa
AA seq
DB search
MADKKRDSSKKSNYSKKNVKNVIKKRGHKKNQEFAEIEEKTALCSELTNDLSMVNQFSDF
PLSSRTLNGLENAGYTKPTAIQKDGISLALRGFDILAAAKTGSGKTLAFIIPILELLWRN
KWTSNDGLGALVISPTRELAFQTYEVLRKVGKNHDFSAGLVIGGKDLEEEQRRILCTNII
ICTPGRLLQHFDETANFHCDSLKVLVLDEADRILDMGFATTMNAIIENLPKTRLTLLYSA
TQTKSVQDLARLSLQNPEYISVHENAKYSTPIRLSQSYVIVNLQDKINFLFSFIKSHLKT
KCIVFMSSCKQVKFIYEVLRKIRPGVPLMALYGKQKQLKRVGVYSKFCQSKAAILFATDI
AARGLDFPSVNWVIQVDCPESVDTYIHRVGRTARFEKNGEAILMLLPSETAMVKKLLDGK
VPLEEIKANPKKLLSIEGKLQAFCAQDQEIKYWAQRCIVSYARSVYLQSDKEVFDINKLP
LDAFAVSCGLLSSPKIRFMKKLVKKIGPIDSSKNINGSKNRTQKEHVGIEVLSKKNDNKG
SLVEKNAFHINSESEDDVLVKKSVELHHVDLDEELDVEPAVARKKKITKASMAKKVIRKN
IKVNTKITFNDEGEVDIDPNNVSVEPVDISSEAGGIDVEKAKFRMKEQDKIDRAIERARI
KKKHKEIKRKEKEERVGLSEGRRVTLGASDDSDRDDVDSDEDSSAFRPPKKQKVEYADDE
TIDANESTVLEDEELALHLLAAS
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaaaagcgtgattcgagtaaaaagagtaattactcaaaaaaaaatgttaaa
aatgttattaaaaaaagaggacacaagaaaaaccaagagtttgctgaaattgaggaaaag
accgccttatgttcggaattgacaaatgacttgtctatggtgaaccagttttctgatttt
cctttatcttcaagaactctcaatggtttagagaatgctggttatacaaaaccaacagca
attcagaaggatggaatttcacttgctttgcgaggatttgatattttagcagcagcaaaa
actggatcaggaaaaactttagcatttattataccgattttagagttactatggcgaaac
aaatggactagtaatgatggtttaggtgctcttgttatttcacctacacgtgaacttgct
tttcaaacctatgaagtgttacgtaaagttggtaaaaatcatgacttctctgctggttta
gttattggtggaaaggatttagaagaagaacagcgtaggatcctttgcacaaacataatc
atttgtacacctggtcgattactgcaacattttgatgaaacagcaaattttcattgtgat
agcttgaaagttttagtgttagatgaagcagatagaattttagacatgggttttgctacg
accatgaatgctattattgaaaatttacctaagacacgacttacacttttgtactcagct
actcaaacaaagtctgtacaagacctggccagattaagtttacagaatcctgaatatatt
tcagttcacgaaaatgcaaaatactctactccgattcgtttgtcacagtcctacgtcatt
gtgaatttgcaggataagatcaattttttgttttcatttatcaaaagtcatttaaaaaca
aaatgcattgtttttatgtcaagttgcaagcaggtaaagtttatatatgaagttctacgc
aaaattcgacctggggttccattaatggcattatatggaaaacaaaaacaactaaagcga
gttggtgtttattctaagttttgtcaatcaaaggctgccattctttttgcaacagacata
gctgcccgaggtttagattttccatctgttaactgggtaattcaagttgactgtccagaa
tcagtagatacatatattcatcgagttggaagaacagctcgttttgagaaaaatggtgaa
gcaatattaatgttattaccatcggaaactgccatggtgaagaagttacttgatggaaag
gttcctttggaggaaattaaggccaacccaaaaaaattgctctcaatagaaggaaaactt
caggcattctgtgcacaagatcaagaaattaaatactgggcacaaaggtgtattgtttca
tatgcaagatctgtatatcttcaaagcgacaaagaggtttttgatatcaataaacttccc
ttagatgcatttgctgtttcatgtggattactttcttcgccaaagatacggtttatgaaa
aagcttgttaaaaagattggtcctattgacagttcaaaaaatatcaatggttccaagaac
agaacacaaaaagagcatgtggggattgaagtacttagtaaaaaaaatgataacaaaggc
tcgttagtagagaaaaatgcatttcacataaacagtgaaagtgaagatgatgttttggta
aaaaagtctgtggaactgcaccatgttgatcttgatgaagagttagatgttgaacctgca
gttgctagaaaaaaaaagattaccaaagccagcatggcaaaaaaagtaattcgaaagaat
atcaaagttaatacaaagataacttttaatgatgaaggagaagtagatattgatcctaat
aatgtatcagtagagccagtagacatttcttcggaggctggcggtatagacgtagaaaag
gccaaatttcgtatgaaagaacaagataagattgatcgagctatagaaagagcaagaata
aaaaagaaacataaagaaataaagaggaaagagaaagaagaacgagttggattgtcggag
gggagaagagtaactcttggagcatcagatgatagtgatagagatgatgtggattctgat
gaagactcgagtgcgtttcgtccaccaaaaaaacaaaaagtagaatatgcagatgatgaa
acaattgatgcaaatgaaagtacagttctcgaagacgaagaactagccctgcatttacta
gctgcatcttga
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