Hydra vulgaris (swiftwater hydra): 100211879
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Entry
100211879 CDS
T01080
Name
(RefSeq) meiotic recombination protein SPO11
KO
K10878
meiotic recombination protein SPO11
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hmg03036
]
100211879
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
100211879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
DUF7281
DUF5716_C
Motif
Other DBs
NCBI-GeneID:
100211879
NCBI-ProteinID:
XP_047132778
UniProt:
A0A8B7E7F7
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Position
5:complement(24228443..24253574)
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AA seq
399 aa
AA seq
DB search
MAKCSPEEDFWCKVNEFTQELVSLKRVSLLGIETIHTKRQIFSLNYLSKEEILEKIENLI
KDFLINIANNSLPKFSINKRGGNFNTDYLKDSGFRMIDVVEASDVSLSHLPSLRKYTIMM
VCLCHCYKLILMGKHSTKRDIYYSNVNLFVCQGYVDDCLANISCMLGVPRNSLNVLSSAK
GLIYGCLKYTNQNNLTVNCYDQVTQIPSEIESIQIIQITARYILVIEKEAIFQRIAEHGF
QEKLGHSLIITGKGFPDVNTRMLLNKICKHVSIPVFALVDADPHGIEIMFVYKFGSKSMS
YEAEHLTCPSMKWLGILPKDIIGMRIPNRVLIPLSQNDNKKLLDLMNRPYVLQNKDYKEQ
INFLHESGLKAEIECLDSISHTYITDIYLPLKLRNGVWI
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatgcagtcctgaagaagatttttggtgtaaagttaatgagtttactcaagag
ttagttagtttaaaaagagtttcactcttaggaatagagacaattcatacgaaaagacaa
atcttcagtctcaattacttatcaaaagaagaaattttagaaaagattgagaatttgata
aaagattttttaataaacatagcaaacaatagtttacctaaattttcaatcaataagcgc
ggtggtaatttcaatacagattatttaaaagattctggttttcgtatgatagatgttgtg
gaagccagtgatgtttcactttcacatttaccttcacttcgaaaatataccataatgatg
gtatgtttgtgtcactgctacaagcttattttaatgggtaaacactcaacaaaacgtgat
atttattattctaatgttaatctctttgtttgtcaaggttatgtagatgattgtctagca
aatatttcatgtatgttgggtgttccacgtaattcattaaatgtattatcatcagcaaaa
gggctaatttatggttgcttaaaatatactaatcaaaataatttaacagttaattgctat
gatcaagttacacaaattccatctgaaatagaaagcattcaaattattcagataacagca
agatacatcttagtaatcgaaaaggaagcaatttttcaaaggatagctgaacatgggttt
caagagaaattaggtcacagtttaataataactggtaaaggttttccagatgtcaacact
cgtatgctgctaaacaaaatatgtaaacatgtatcaatacctgtgtttgcacttgtggat
gcggatcctcatggaattgaaataatgtttgtgtataaatttggatcaaaatcaatgtca
tatgaagctgagcatttgacatgtccttcaatgaaatggctaggtattctccctaaagac
attattggcatgcgtatacctaatagagtacttattccactttcacaaaatgataataaa
aaattattagacctaatgaatcgtccttatgtgttacaaaataaagattataaagagcaa
ataaattttttgcatgaatcaggtttaaaagcagagattgagtgcttggattcaatatct
catacgtatataactgatatatatttaccacttaaactacgaaatggagtttggatataa
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