Hydra vulgaris (swiftwater hydra): 100211922
Help
Entry
100211922 CDS
T01080
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100211922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hmg03021
]
100211922
03036 Chromosome and associated proteins [BR:
hmg03036
]
100211922
Transcription machinery [BR:
hmg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100211922
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100211922
PBAF complex
100211922
GBAF(ncBAF) complex
100211922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
MMR_HSR1_Xtn
Motif
Other DBs
NCBI-GeneID:
100211922
NCBI-ProteinID:
XP_002163319
UniProt:
T2M832
LinkDB
All DBs
Position
7:40648001..40678102
Genome browser
AA seq
460 aa
AA seq
DB search
MFRQNLQAGASPAPNPNIAATWQRGMRTGQSPNMQMRSTNVVNTAPHTPDSNKRPVELKN
ASKPSKSVKKRKIKDQIITQEVIELVPESQAYMDLLAFENKLDATITRKKLDIQEALKRP
LKQKQTLRIFVSTNVYPAKVDETGRETAPAEWEVRIEGRLLNDPEVQKESNSTNQKRKFS
SFFKNLVIELDKSIYGPENHLVEWHRTTSTQETDGFQVKRQMVGNMEVKCQIFLMIDYKP
PQFKLSSQLARVLGIHTQTRPVIIGALWQYIKQNKLQDQEEREFINNDKYMAEIFSCQRM
KFCEIPQRLQAHLLPPEPIVITYMVNTIEEKKSSCYDIEIEIDDSLRDIMQSFMLSSASQ
QEITTLDAKINETVEGINQLKVHRDFFLSFANNPQKFMNDWLTSQCADLKTMTDVAGNAE
EERLSEFYNQPWIEEAVHRYFYRQIQTKRAELEQVLGIRS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtttaggcaaaatttgcaggcaggcgcttcccctgctcctaatccaaacatagcagca
acatggcaacgaggaatgagaacaggtcaaagtcctaatatgcagatgagatctacaaat
gttgttaatacagcaccacatactcctgatagtaataagcgtccagtagaacttaaaaat
gcttcaaaacctagtaaaagtgtgaagaaaagaaagataaaagatcagataattacacaa
gaagtgattgagttagttcctgaatctcaagcttatatggatttattggcttttgaaaat
aaacttgatgctactattacacgaaaaaagcttgatatacaagaagcattaaagagacca
ttaaaacaaaagcaaactttaagaatttttgtgtctacaaatgtttatccagcaaaagtt
gatgaaactggaagagaaacagctccagctgaatgggaagtccgtatcgaaggcagattg
ttgaatgatccagaagtacaaaaagaaagtaactcaaccaatcaaaaaagaaaattttcc
tcattttttaaaaatctggttatagagcttgataaatcaatttatggaccagaaaaccac
cttgttgagtggcatcggactacttctacacaagaaactgatggctttcaggtaaaaaga
caaatggttggcaatatggaagtaaagtgtcaaatatttttaatgatagattataagcct
ccacagttcaaactatcttctcaattagctcgggtgttaggcatccacacacaaacacga
cctgtaataattggtgctctttggcagtatataaagcaaaataaacttcaagatcaagaa
gaaagagagtttattaataatgacaaatatatggcagaaattttcagttgtcaacgaatg
aagttttgtgaaataccacaacgtttacaggcacacctactgcctcctgaacctatcgta
ataacatacatggtgaatactattgaagagaagaaatcgtcctgttatgatattgaaatt
gaaatagatgattccttgcgcgatataatgcaatcgtttatgctatccagtgcaagccaa
caagaaattactactttagatgcaaagatcaatgaaaccgtagaaggaattaatcagcta
aaagttcatcgagattttttcttgtcttttgcaaataatcctcaaaaatttatgaatgat
tggcttacttctcaatgtgctgatttaaagacaatgacggatgtggcaggtaatgctgaa
gaagaacgtttatcagagttttataatcaaccttggatcgaagaagctgttcatcgttat
ttctatagacagattcaaacaaaacgcgctgagttagagcaagtacttggcataagaagc
taa
DBGET
integrated database retrieval system
