Hydra vulgaris (swiftwater hydra): 100211944 Help Entry 100211944         CDS       T01080                                  Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism hmg  Hydra vulgaris (swiftwater hydra) Pathway hmg03040   Spliceosome Brite KEGG Orthology (KO) [BR:hmg00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     100211944  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:hmg03019]     100211944    03041 Spliceosome [BR:hmg03041]     100211944 Messenger RNA biogenesis [BR:hmg03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      100211944 Spliceosome [BR:hmg03041]  Complex B   Other components    Prp19-related factors     100211944  Complex C     100211944 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf TPR_15 TPR_12 TPR_2 ARM_TT21 ARM_TT21_4th Mad3_BUB1_I CCDC84 DHR-2_Lobe_A ARM_TT21_C DUF7553 Motif Other DBs NCBI-GeneID:  100211944 NCBI-ProteinID:  XP_047132982 UniProt:  A0A8B7E1Z7 LinkDB All DBs Position 5:32155953..32192015 Genome browser AA seq 849 aa AA seqDB search MVETEVVRKKPEMVLDELDMPYEEEILRHPYSVKCWLRYIEHKIGNGGKDHVVNLIYERA LKELPGSYKLWYNYLRLRRKQTKGKCITDPIYADANNAHERALVFMHKMPRIWLDYCQFL IDQCFVTRTRHAFDRALRALPITQHSRIWPKYLAFVNKHNIPETAVRVYRRYIKVEPENT EAYIDYLMEIGWLDEAASKLAFIINQDNFVSKKGKSNHQLWHELCELISKNPEEVKSLKV ADIINGALRRFTDGLGQLWCSLADYYTRGSHFERARDVYEEAIQTVMTVRDFGEVFDAYA QFEESMISAKMQESEEIGLDEDGEVDLELRLARFELLMDRRPLLLNSVLLRQNPHNVHEW HKRVQLYEDKPHEIINTYSEAVQTVDPMIATGKPHTLWVEFAKFYEKHGQIKETRIVFEK SLKVKYRHVEDLANVWCEYAEMEIRNNNSDEALKVLRRATSVPRKKIGTNFYDTKESVQN RVHKSIKIWCMYADMEESLGTFQSTKAVYNRIIDLRIATPQVIINFASLLEENNYFEESF KAYERGIALFKWPHVYDIWNTYLTKFIARYGGNKLERARDLFEQCLENCPEKFAKNLYLL YAKLEEDFGLSRHAMAVYERATKAVPKSEQFEIFNIYIKRAAELFGITHTRTIYEKAIEA LSDEHARTICLRYADLETKLGEIDRARAIYSFGSQMCDPRIAANFWKAWHDFEVKHGNED TFREMLRIKRSVQAQYNTQVNFMSAQILASQAISEADSKNVMEKLEEQANALAEEAAKDA PSSIVTQKSVLFVRGETNTTEYEQSKNPDEIDIAEASSEDDGDEDDIQLMQREVPEEVFG GVMRNSSAS NT seq 2550 nt NT seq  +upstreamnt  +downstreamnt atggttgagacagaggttgttcgtaagaagcctgaaatggttttggatgagttggatatg ccatatgaagaagaaattttgcgacatccctactctgtaaagtgctggttaagatatatt gaacataaaattggaaatggaggaaaagatcatgttgtgaatttgatctatgaaagagca cttaaagaattacctggaagttataagttgtggtacaattatttgagactgagaaggaag caaaccaagggaaaatgtattacagatccaatttatgcagatgcaaataatgctcatgaa agagctctggtcttcatgcataagatgccgcgcatatggctagattactgtcaatttctt attgatcagtgctttgttactcgaacacgtcatgcttttgatcgtgcattaagagcctta cctattacccagcattcaagaatatggccaaaatacttggcatttgtcaacaagcacaac attccagaaacagctgttagagtttaccgaagatatattaaggtcgaacctgaaaatact gaagcttatattgattatttaatggaaattggatggttggatgaagctgcgtccaaacta gcttttattattaaccaggataattttgtttctaagaaaggaaaatcaaatcaccagttg tggcatgaactctgtgaacttatttcaaaaaatcctgaagaggtcaagagtttaaaggtt gcagatattataaatggtgcgttgcgacgttttactgatggccttggacaactatggtgt tcacttgctgattattacactcgaggaagtcattttgaaagagcaagagatgtttatgaa gaagctattcaaacagtaatgacagtcagagattttggagaggtgttcgatgcatatgct caatttgaagaaagtatgataagtgcaaaaatgcaggaatcagaagaaataggtcttgat gaagatggtgaagtagatctggagttgagacttgctaggtttgaattattaatggacaga agacctcttcttttaaatagtgttttacttcgacaaaacccacataatgttcatgaatgg cataaacgtgttcaactatatgaagataagcctcatgaaatcataaatacttactctgag gctgtccaaactgttgatccaatgattgctactggaaaacctcatacattgtgggtagag tttgctaagttttatgaaaaacatgggcagattaaagaaaccagaatagtgtttgagaaa tcgcttaaggtaaaatatagacatgtcgaagacttagcaaatgtttggtgtgaatatgca gaaatggaaatacgaaataataacagtgatgaagctttaaaggtacttcgtagagcaact tccgttccccgaaagaaaataggcactaatttttatgatacaaaagaatctgttcaaaat cgtgtacataaatcaattaaaatttggtgcatgtatgctgacatggaagaaagtttggga acctttcagtcaacaaaagctgtttacaatcgcataatcgatctacggattgcaacacca caagttatcattaattttgctagcttattggaagaaaacaattattttgaagagtccttc aaagcatatgaacgaggcatagcgctattcaaatggccacatgtgtatgatatatggaat acttatttaacaaaattcatcgcaagatatggaggtaataaacttgagagagcaagagat ctatttgaacaatgtcttgaaaattgtcctgaaaagtttgcaaaaaatctttacctttta tatgcgaagcttgaagaagactttggtttgtctcgacatgctatggcagtttatgaaaga gcaactaaggctgttcctaaatctgaacaatttgagatttttaatatttacattaaacgg gcagctgaattatttggaataacccatacacgaactatatatgaaaaagctattgaagca ctctcagatgagcatgctagaactatttgtttacgctatgctgatcttgaaacaaaactt ggtgaaatagatcgagctcgtgctatatatagttttggttctcaaatgtgtgatccaagg attgcagcaaatttctggaaagcctggcatgattttgaagtcaaacacggaaatgaggat acttttagagaaatgttgagaatcaaaagaagcgtgcaagcacaatacaatacccaggtc aactttatgtctgcacaaatccttgcgtctcaagcaatttcagaagctgattctaaaaat gttatggaaaagttagaagaacaagctaatgcacttgctgaagaagctgctaaggatgca ccttcttctatagtaacacaaaaaagtgtactgtttgtgcgaggtgaaactaacacaaca gaatatgaacaatcaaaaaatccagatgagattgacattgctgaagctagctctgaagat gatggtgatgaagatgatatacaattaatgcaaagggaagttccagaggaggtatttggt ggcgtcatgaggaactcttcagcttcataa

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