Hydra vulgaris (swiftwater hydra): 100212099
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Entry
100212099 CDS
T01080
Name
(RefSeq) uncharacterized protein LOC100212099
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100212099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hmg03036
]
100212099
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
100212099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
Motif
Other DBs
NCBI-GeneID:
100212099
NCBI-ProteinID:
XP_047130609
LinkDB
All DBs
Position
4:complement(30558842..30622407)
Genome browser
AA seq
1253 aa
AA seq
DB search
MLSLLNNEEVMLPEELVQSEEIFREVLKKGIQESLNDTEKRHLMCFLPSSGKTETENVDL
LFFEETLNKVFEGSSNFKHGDPLKHAYLKLQSGLLTPKVIELQKKCLKLKEKNYKLNQKE
YYKNLLEEIILSRQRLLGRAYAGKAPLKRHPSDIFSMVKQRAKKKYKRILRDISRECGDN
VTSSDEDDLLPQDNSLISEYELTCMLGKHKKKRVLCQDHPELNTTNISLADLVMRCNGLK
KSNLRHNNAGPSKINMSTPIHDKIIEKKKIKSKLATSHSTPPKHHQTPPASVVSLETKKV
SKPIKCPPVIFPKMDSFFSLIGYIFDNAENKKCTLATIEEKIQRWQKYKSGDTCTWKTLY
PSWVPFIPFAIEYMSGKGTASQLPEFTPLLLADDNCWCWTGPDYTNNSIILPLCNHWMDT
LGEAMAPNSNKECNKEKQDVDRTSYSVCPSSNEQKEEFRRQEKERFLKPYMPFVYTLHGY
SSVAAPVKGVFKDSNFDTAKAREHAMLVSERPAYVTILSLVRDAVARLPNGEGTRAEVCL
LLRDSQFLNPKATDSQVNNVVSGALDRLHAEKDPCVKFDPVRKVWLYLHRYRTVDELEKL
HQASGAAVLAKKQLSSAKPKILKMKKNEKEDKNCKVSNIKKDLFDNTLEEEINNSSESIV
KSISETSINTTNNFTKKKTAVKRKQINDSSILKISKLDNCNMDTSNEFHSLFEDETLMAT
QSLMLSGEDDVFDDGVLSSNFLDLQQNDELITNSSFQSHQNLSYNNNNLATQKNEVYENR
NNILLENCNIEQDTNSLKQQVNAKKHFNESNVVSISTDLNKTAKHQNLKKKIIPEQLISG
TNVDLQIGPQHMAQTIQKSVSESKDQVIINNTVPDNLVERQHVRVILNTNQINAECSRAI
TNANKETFQNLNQYLSSKIAQNKVVSSSLSNSSILHNTIVRANVAPFSQVIRSSGSFLEQ
IRVSKPLLTLQNQNNAITRLVVQSNNFSQTHAGGQKTTLKLIQVKGNNGSQVITSHPPNL
QNVRTSKNDGNVHLLSLNQLIASNASQSKFTDRTVLSSVATGTCVPVASIQALLQSGQKS
RFPSPHGDQPQFIINHQNVQKNVNSRISSSLHGSSVTVSNSVSNSLHGSSNASKILDKNM
NTGKILNIETTLSKNASGKEVFTYFPGSVISRGIRPTMAPLKITLPRSGFNSPQSTNNSP
IRISNVYSPRSPSFEKIVVSRNPNSITPLRYPPPTEHLVNLKDCLKNSDQSLN
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgttatctctgttaaataatgaagaggttatgcttcctgaagaacttgttcaaagtgag
gaaatatttcgagaagttttgaaaaaagggattcaagaaagtttaaatgatactgaaaaa
agacatttgatgtgtttcttaccatcttctggaaaaaccgaaactgaaaatgtggattta
cttttttttgaggagactcttaataaagtttttgaaggaagttcaaacttcaaacatgga
gatcctttaaaacatgcatatttaaaactacaaagtggtttgttgactccaaaagtaata
gaactgcaaaagaaatgtttaaaacttaaagagaaaaattataagctaaatcaaaaagag
tactacaaaaatttattagaagaaataatactctcaagacagcggctgttgggaagagca
tatgctggaaaagcacctttaaaaagacatcctagtgatattttttcaatggttaaacag
cgtgcaaaaaaaaagtataaaaggattttacgagatatttcaagagaatgtggtgacaat
gttacatcttcagatgaggatgacttgcttcctcaagacaattcacttataagtgaatat
gaactaacctgtatgctaggaaagcataaaaaaaaaagggttttgtgtcaggatcatcca
gagttgaatacaacaaacattagcttagcagacttagttatgcgttgtaatggtttaaag
aaatcaaatttgaggcataacaatgccggtccaagtaaaattaatatgtcaactcctatc
catgataaaattattgaaaagaaaaaaattaaatcaaaacttgctacatctcattcaaca
cctcccaaacaccaccaaacacctcctgcttcagttgtttctcttgaaacgaaaaaggta
tcaaagccaataaagtgtcctccggtcatttttccgaaaatggattcatttttttcttta
attggatatatatttgataatgcagaaaataaaaagtgcactcttgcaactattgaagaa
aaaatccaaagatggcagaagtataaatctggagacacttgtacatggaagacattgtat
ccctcatgggttccattcataccttttgctatagaatatatgtcaggaaagggtacagct
tcacaattacctgaatttactccgttacttttggctgatgataattgttggtgttggaca
ggtcctgattatacaaataatagtattatcttaccattgtgtaatcattggatggatact
ttaggggaagcaatggctcctaacagcaataaagaatgcaataaagaaaagcaggatgtt
gatcgtacaagttattctgtgtgtccaagctcaaatgagcagaaagaagaatttcgaaga
caagaaaaagaaagatttttaaagccttatatgccgtttgtttacactttgcatggatat
agctctgttgctgcccctgttaagggtgtatttaaagatagcaactttgacacagctaaa
gctagggagcatgctatgcttgtttctgaacgtcctgcttatgtcactattttaagttta
gttcgtgacgcagttgctaggttaccgaatggagaaggtactagagctgaggtttgtttg
cttttacgtgattctcaatttttgaaccctaaggcaacagatagtcaggttaacaatgtt
gtaagtggtgcgttggatcgtttacatgctgaaaaagatccatgtgtaaaatttgatcca
gttcgaaaggtgtggctatatttgcatcgatatcgaactgttgatgagctagaaaaatta
catcaagctagtggggctgctgttttagccaaaaaacagctttcttctgccaaaccaaaa
attttgaaaatgaaaaaaaacgaaaaagaagataaaaattgtaaagtttcaaatataaaa
aaagacttgtttgacaatacattagaagaagaaatcaataattcatctgaaagcatcgtc
aaatcgatatctgaaacttctataaacacaactaataatttcactaaaaaaaaaactgct
gtaaaaagaaaacaaataaatgattcttcgattctgaaaatatctaagttagataactgt
aacatggatacctctaatgagtttcattcgctttttgaagatgagactttaatggcaacc
caatctttaatgttgagtggagaagatgatgtttttgatgatggtgtattaagtagcaat
tttcttgatttacaacaaaacgatgagctaattacaaattcatcttttcaatcgcatcaa
aatttgtcgtataataataacaatttagcaactcaaaaaaatgaagtttatgaaaataga
aataatattttgttggaaaattgcaatattgaacaagacactaattctcttaaacaacaa
gttaatgcaaaaaaacatttcaacgaatctaatgtagtttccatttctaccgatttaaac
aaaacggctaaacatcaaaatctaaaaaaaaaaataattcctgagcaattgatttctggt
accaatgttgatcttcaaattggtccacaacatatggctcaaaccatacaaaaatctgtc
agtgaatcaaaagatcaagtaattataaataatacagttcccgataacttagtcgaacga
caacatgttcgtgtaattctaaacactaatcaaataaatgctgaatgcagtagagccata
acaaatgctaacaaagaaacatttcaaaatttgaaccaatatttgagttcaaagattgct
caaaacaaagttgtaagttcgtcactgagcaattcatctatccttcataacacaattgtt
cgtgcaaatgttgcacctttctctcaagttattcgttccagtggttcttttcttgaacaa
atacgtgtaagtaaaccattacttactttgcaaaaccaaaacaacgctattacccgctta
gttgttcaatcaaataacttctctcaaactcatgctgggggtcaaaaaacaactttaaag
cttatccaagtaaaagggaacaatggatcccaagtcattacttcgcacccccctaattta
caaaatgtaagaacttcaaaaaatgatggcaacgtgcatttactttcacttaaccagctt
atagcatcaaatgctagccaaagtaagtttactgatagaactgttctatcttcagttgcc
actggtacatgtgtacctgttgctagtatacaagcattgctacaatctgggcaaaaatct
cggtttccttctccacatggtgatcaacctcaatttataattaatcatcaaaatgttcaa
aaaaatgttaactcgcgcatttcaagttctcttcatggttcttctgtaactgtctctaat
agcgtatcgaattctcttcacggttcgtccaatgcttcaaagatattagataaaaacatg
aatacgggtaaaattttaaatatagagactacattgagtaaaaatgcatcaggaaaagaa
gtatttacttattttcctggaagtgtaatttcgcgtggtatacgtccgactatggcaccg
ctcaaaattactctaccgcgtagtggttttaactcaccgcaatcgactaacaactcgcct
attcgtattagtaacgtatattctcctcggtcgccttcttttgagaaaatagttgtttcc
aggaatccaaatagtatcacgccgttgcgatatcctcccccaactgaacatttagtaaac
ttaaaggattgtctaaaaaattccgatcaaagtttaaactga
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