Hydra vulgaris (swiftwater hydra): 100212106
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Entry
100212106 CDS
T01080
Name
(RefSeq) nuclear pore complex protein Nup155-like
KO
K14312
nuclear pore complex protein Nup155
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100212106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmg03019
]
100212106
Messenger RNA biogenesis [BR:
hmg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100212106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
100212106
NCBI-ProteinID:
XP_047122862
LinkDB
All DBs
Position
14:complement(28162299..28251451)
Genome browser
AA seq
1343 aa
AA seq
DB search
MHSKGLKKFLFSSIKRRELPEVLDAASKEVDFCMMVDEKFPSLEEQLKINASPSFSGMND
YDYPECVKQKLISVKRTPLPEELISQFTNMQCNCVMGIFPEISRAWLAIDSDIYFWVYED
GSDVAYFDGIKEVILAVNLINPKAGMFQEHIKYLLCVTTPLNIYLLGVSFTEKTGTFGPD
DFGSIQLHPEPLFQVPSDNVYMTSITGTSNGRIFLAGRDSCLYELVYQAKSGWLFGQRCY
KVNHSSSKLSYFVPVFLSFVFSQDDPIEQLAMDNTRGILYCRTMNGNIKAYYLGADLSEM
RFMCGISSSNASKHAQYILRTVDYRNFEKIVHIAPVPKSDSRTIHLVAVTSTGVRLYFAT
SQDVYGTPSNLCLVHVRMPPGFAPSLSPEKPSNVHAAFYRQGTSILIGGVSEEVDRLWCL
SQDLFPFNIPIRESESVISINGRTWCLSEIPDYTSLSSAPFHLFNENLQDPPSIITQHVL
PARRFVLLSAQGSHILTTLRPLEKLRSLLLSGNIETDAVASFFQQYGADQACAVCITLVC
QCAESEAYIGDFAIQAFFRYGSGAQKFNKVTNVLPGISNPMESYLVGSPVQGGSSQGSFL
ATPIPQSYHNQQPTPAQPNLTSTVLPPSKNLNAQENRKSGKYNGLVIYFSRLLRPIWNLS
MVSEVLVDDKKIQLQSRLTSAELSWFTEQLYKLRKFMDTYSDVTASQSPTYIHRFSLVSE
ESSVPHDVFLEEKRALKTFHNLLLITLEALELWRVLADHQFHLVVEDAPIDIKEKLKHIP
LKDLFSSTGSELSTCLINLLMEKYLHDNSAIENLSNRLREICPTIYSANDAMCTRANETV
ISASLVNNQKEKEKILQEALMIYSKVPDLVNLQWVTQQLKLNNFYAGIVQLCLTTALNCD
PMGIALHFYKTGEPLDDIEGVEAFNMHQESYRCILETLEDLLNTGNSHPASPHLPTRPGP
PVPPDGLSAEQARKFYNQMLMAGLSCGDELFHVALYTWLIKTNQTDRLLEIKSPFIEQYL
ISTAAEQHPNNKDTLDLLWKFYEKNNNFLAASKVLLKLAEREGPLLTIHDRLECLSRAVM
SAKSIVNFYEGEFLYELEEKLEVARIQLQLFDQLSQKKVASKKVEDTILQLNSKLFDISA
LYEFAEESSLPVCKLAIIHCAGHADNKLVHKIWQEIVEQAFENTYTLSSLDKMEAISQQL
VLVGKSYVKQEQYFPTYFLISMLERKSCEMIWQHQWVFMTALEMGIDPMALFNEYNKIFN
AKENTWRALGKPLHILHVLSLLLIYFLENPPTISADRIAFSRSLFEATTSYLVELESMSL
SDPEVKVLLPRFKGIQAKLKRAL
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atgcattcaaaaggcctaaaaaaatttttgttcagctcgataaaaagaagagaattacct
gaagtcctggatgctgcatctaaagaggttgatttttgtatgatggttgatgaaaagttt
cctagtcttgaagaacaattaaaaataaatgcttctccttcattcagtgggatgaatgac
tacgattatccagaatgtgtaaaacaaaaacttatatctgttaaaagaactccgcttccg
gaagaacttatcagtcaatttactaacatgcaatgtaattgtgtaatgggtatttttcct
gagataagtcgtgcttggctggctattgatagtgacatatacttttgggtatatgaagat
gggagtgatgtagcttatttcgatggaatcaaagaagtaattcttgcagttaatcttatt
aatccaaaagcagggatgtttcaggaacacataaagtatttactatgcgttacaactcca
ttaaatatatacttgctgggtgtgagttttacagagaaaacaggtacctttggtcctgat
gattttggctctattcaactacatcctgaacccttgtttcaagttccgagtgataatgtc
tacatgacttcaataactggaacaagcaatggaaggatatttttagctggacgagatagt
tgtttatatgagcttgtataccaggcaaaatctggttggctgttcggacaacgttgttat
aaagtaaatcattcgtctagcaaactatcttattttgttcctgtatttctatcatttgtt
ttttcccaggatgatcctattgagcaacttgcaatggataatacaagagggattctttat
tgtcgtacaatgaacggtaacataaaggcttattatctgggtgctgatctctcagaaatg
cgattcatgtgtggtattagcagttccaatgcatcaaagcatgctcaatacattcttcga
actgttgattatcgtaattttgaaaagatagttcatatagcacctgttccaaagtcagat
tccaggacaattcatttagttgctgtaacatcaacaggtgttcgtttatattttgcaact
tctcaagatgtttatggaactccaagtaacctttgtttagttcatgtgcgtatgccacca
ggcttcgcaccatctctttctcctgaaaagccatcaaatgtgcatgcagctttttaccgt
caaggtacttcaatactcattggtggtgtgtctgaggaggttgacaggttatggtgttta
agtcaagatttgtttccattcaatattccaatcagggagtcagagtcagtaatatcaatt
aatgggcgcacttggtgtttgtccgaaattcctgattatacaagtttgtcttctgctcca
tttcatctatttaatgaaaatttgcaagatccaccttctattataacacagcatgttcta
cctgctcgtcgttttgttcttttaagtgctcagggtagtcatattttaaccactttgcgt
cctctggaaaagcttcgttctcttttgttaagcggaaatattgagactgatgcagtagct
tctttttttcaacagtatggagcagatcaagcttgtgcagtttgtatcacacttgtttgc
caatgtgctgaatcagaagcttatataggtgattttgctattcaagctttctttcgttat
ggcagtggagctcaaaagtttaataaagttacaaatgtattacctggcatatctaaccca
atggagagttatttagttggaagccctgttcaaggaggtagcagtcaaggaagttttcta
gctacaccaattccacaaagctatcacaatcaacagcctacaccagctcagccaaatctt
acctcaacagttttgcctccatcaaaaaatctaaatgcacaagaaaatagaaaatcagga
aagtacaatggcttggtgatatatttctcaagacttcttagacctatatggaacttgtca
atggtttctgaagttttggtagatgataaaaaaattcagttgcaaagtcgtctaacaagt
gcagagttatcatggtttacagaacagctatacaaattgaggaaatttatggatacatac
tctgatgtcactgcatcacaatctcctacttatattcatcggttttctcttgtttcggaa
gaatcaagtgttcctcatgatgtatttttggaagaaaagcgagccttaaagacattccat
aatttgctgcttattacattggaagcattagagttatggcgagtgttagctgatcatcag
tttcatcttgttgttgaagatgcaccaatagatatcaaggagaagttaaagcatattcct
ttaaaagatttattttcctcaaccggaagtgaactcagcacttgtttaataaacctacta
atggaaaaatatttgcatgataactctgccattgagaacttgagtaatcgtttgcgtgaa
atttgtccaacaatttattcagctaatgatgccatgtgtaccagagcaaatgaaacagtt
atatcagcgtctttggtaaataaccagaaagaaaaagaaaaaatacttcaagaggcttta
atgatttattcaaaggttccggatttggttaatttacagtgggtgactcagcagctaaaa
ttaaacaatttttatgctggtattgtacaactatgcttaacaactgcactaaattgtgat
ccaatgggtattgctctacatttctataaaactggcgagccgctagatgatattgagggt
gttgaggcatttaatatgcatcaagaatcatacagatgcatccttgagactttggaagat
ctacttaacacaggcaattcacatcctgcatcaccacatcttcctaccaggcctggtcct
cctgttcctccagatggattatcagcagagcaagcaagaaaattttacaaccaaatgttg
atggctggtttgagttgtggggatgaactatttcatgtcgctttgtatacttggttgatc
aagactaatcaaactgatcgacttctagaaataaaatctcctttcatagagcaatatcta
atttctactgcagcagagcagcacccgaataataaagacacattggatttactatggaag
ttttatgaaaagaataacaactttttagctgcatcaaaagttcttctgaagcttgctgaa
cgtgaaggacctctgctgactatacatgatagattggaatgtttatcacgtgcagtaatg
agcgccaagagtattgtgaatttttatgaaggagaatttttatatgaacttgaagaaaaa
cttgaggttgctcgaattcagttacaactgtttgaccaactttcgcaaaagaaagttgct
tcaaaaaaagttgaagacacaatattacagcttaattctaaactgtttgatatatcagct
ctctatgagtttgcagaagagtcatcacttccagtttgtaaattagcaataattcattgt
gctggacatgctgacaataaacttgttcataagatatggcaagaaattgttgaacaagca
tttgaaaacacctacactctctcctctcttgataaaatggaagccatttcacaacaactt
gttcttgtcggaaaatcttatgttaagcaagaacaatattttcctacttatttccttatt
tctatgctggaaagaaaatcctgtgaaatgatttggcagcaccaatgggtattcatgact
gcattggaaatgggtattgacccaatggcattatttaatgaatataacaaaatatttaat
gcaaaggaaaatacatggagagcattaggcaaaccattgcacatattgcatgttttatcg
ttgcttttgatatacttcttagagaatcctccaactatcagtgctgatagaattgcattc
tcaagaagtctctttgaagccaccacatcttatttagttgaattagagtcaatgagcttg
tctgatcctgaggtgaaggttttactaccaagatttaaaggaattcaagcaaagttaaaa
cgggctttgtga
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