Hydra vulgaris (swiftwater hydra): 100212204
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Entry
100212204 CDS
T01080
Symbol
LOC100212204
Name
(RefSeq) transcription factor SPT20 homolog isoform X2
KO
K21245
transcription factor SPT20 homolog
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100212204 (LOC100212204)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hmg03036
]
100212204 (LOC100212204)
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
100212204 (LOC100212204)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
100212204
NCBI-ProteinID:
XP_047124249
LinkDB
All DBs
Position
12:56256064..56297435
Genome browser
AA seq
862 aa
AA seq
DB search
MMLSPVGGLDNVDPFQMLDKGIPDFEKVESKKSLLERMLECYKEETMKQDKNKGTVKQSY
LLEKLVKEDCLSVLIVNLYPGNDGYSLMLKKKDGNEIETVHLPYEENEFLTYLDLQELPP
LLVDILDSAQVGIYHDGCVIVELRDFRRNIHKNCDKSYVLLKPTSQTIIRDVNSMMSDPL
KWDLEDKQYLESQLVLALQPRISLDPSPNILTIANKIQYQSNKWNNKGLKRALRHYSQPY
LNRAVLCSNTQSPACLRLHDFINSHHDKRSMKSNRATQHIDMWKQRPVTLTIPSKIDVNS
YAKVHEQPKYTTDYTPEKIQEIILEGEKTNNRSYFCRVTIQRRGSTGEYIGDLYLEEDYL
SAKDESHKDGRSCRFSLGNRQTAQRYLQQFQELYTEEGRKSVKISTFVANQGNQQKVTTV
AQPSSVSTTPNITLPKTTESTLTLNLSRTFSQPQNAVFSQGNTYILASSVPGLQQQLNLP
SNVVMSLSSSLAQSLVSGNTTFSIGGNPYFVNASGNLQQAVNSKPIQSPAKVCGNQVIGN
DLNSLKTTNYIQPIVSGATMSASHAQLTAVPIAVQGNSVNIVQGNIGAQFITKATQSIRP
AGTTGQIMLQVPGNLVPFSQMTRVAQQKLQGTNMASVMMHGKQVMVQGSPGVIQGQATFI
PNQAALIPGLQGAQAAIIQGNSIFVQPNQSLIGSQHQGQTVMIQGQTNQHVSNSGTLLQG
QSLQGQAVFIQGQPNTGGIQGQTILLQNQGAHQSQMQLITTSSSVQQQIQLVSQMKQVNA
ACSGSRGTITSCRPTVTPQVNLIQVQQPNVNQHQYQPIVNFTAQTQNQQPRPVLQKRRAS
AQQPAPPGNGKKKPPLSKPSSN
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgatgttatctccagttggtggcttagacaatgtggatccatttcaaatgctggataaa
ggtattcctgattttgaaaaagtagagtcaaagaaatctttgcttgaaagaatgctagag
tgttacaaagaagaaaccatgaagcaagataaaaataagggaacagtgaaacagtcatat
cttcttgaaaaactagtcaaagaagactgcttaagtgttctaatagtaaatttgtaccca
ggaaatgatggttactctttgatgttaaagaaaaaagatggtaatgaaatagaaactgtc
catttaccatatgaggaaaatgaatttttgacatatttggatctgcaagagctccctcca
ctcttggtagacattcttgatagtgcacaagtaggcatatatcatgatggctgtgtaatt
gtggaattgcgagatttccgcagaaatatccataaaaattgtgataaatcatatgtgtta
ctcaagcctaccagtcagacaatcattcgagatgttaattcaatgatgtctgatccctta
aaatgggatttagaagataagcaatacttagaatcacaattagttttagcattgcaacct
cgaatttcattggatccttcacctaatattttgacgattgcaaacaaaattcagtaccag
tccaacaaatggaacaataagggtttgaaaagggctcttcgacattattctcaaccttat
cttaatcgagctgtgttatgttcaaatacccaatcacctgcttgtttacgtttacacgat
tttatcaattcgcatcatgataaacgttctatgaagtctaaccgagcaacacaacatata
gatatgtggaaacaaaggcctgtaactttaactataccatcaaaaattgatgttaacagt
tatgcaaaagttcacgaacagccaaaatatacaacagactatacacctgaaaagattcaa
gaaattattcttgaaggagaaaaaacaaacaatcgatcatatttttgcagagttacaatt
cagcggcgaggatcaactggtgaatatattggcgatttatatttggaggaagactactta
agtgcaaaggatgaaagtcacaaagatggcaggtcttgtagattttctctcggcaatcgt
caaactgctcaaaggtatctacaacagtttcaagaactttatactgaagaaggtcgcaag
tcagtgaaaatttctacatttgttgctaaccaaggaaatcagcaaaaagtaactacagtt
gcacaaccgtcttctgtttcaacaactccaaacattactttaccaaaaactacagaatct
acattgactttaaatttgagtcgaacattttctcaaccacaaaatgcagttttctctcaa
ggaaatacttatattcttgcaagttcagtaccaggtcttcaacagcagctaaatcttccc
tctaatgttgtaatgtcactatctagttctcttgcacagtctcttgtttctggaaatacc
actttttccataggaggtaacccatactttgttaatgcctctggaaacttacaacaagct
gttaattctaaaccaattcaatcacctgctaaagtgtgtggaaatcaagtgataggaaat
gatcttaattcattaaagacaacaaactacattcagccaatagtatctggagcgacaatg
agtgcatctcatgctcagcttactgcagtacccattgctgtgcaaggaaatagtgttaat
attgtgcaaggtaacataggtgcacagtttataacaaaggcaacacagtctattcgacca
gctggaacaactgggcagatcatgttgcaggtccctggtaatttggttcctttttcacaa
atgacaagagtagcacaacaaaagttgcaaggcactaatatggcttcagttatgatgcat
ggtaaacaagtaatggttcagggttcaccaggagtaattcaaggtcaagccacttttatt
cctaatcaagcagcattaatacctggtctgcaaggagctcaagcagccattatacaagga
aattctatctttgttcaaccaaaccagtcactgataggcagccaacatcaagggcaaact
gtaatgatacaagggcaaacaaatcagcatgtttcaaattcaggaactctattacaaggt
caatctttacaagggcaagctgtttttattcaaggtcagccaaatactggtggaatacaa
ggacaaactatattgcttcagaatcaaggtgcacaccaaagccaaatgcagttaattaca
acatcgtcttctgttcagcagcaaatacaacttgtatctcaaatgaaacaagttaatgca
gcatgttcaggctcaagaggtacgattacatcatgtcgtccgacagttacaccgcaagtt
aatctcatacaagtgcaacaaccaaatgttaatcagcatcagtatcaacctatagtaaat
tttacagctcaaacacaaaaccaacagcctcgtcctgttcttcaaaaacggcgtgcatca
gctcagcaacctgctcctccaggaaatggaaaaaaaaaaccaccattaagcaaaccatcc
tcaaactga
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