Hydra vulgaris (swiftwater hydra): 100212260
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Entry
100212260 CDS
T01080
Name
(RefSeq) serine/arginine-rich splicing factor 5
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100212260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hmg03041
]
100212260
Spliceosome [BR:
hmg03041
]
Common components
Common spliceosomal components
SR proteins
100212260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
SET_assoc
RRM_3
DUF7376
Motif
Other DBs
NCBI-GeneID:
100212260
NCBI-ProteinID:
XP_002156792
UniProt:
A0ABM4C1A7
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All DBs
Position
8:complement(41274898..41290783)
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AA seq
244 aa
AA seq
DB search
MSRYKLFIGHLSPDARTRDLERFFKDHGFSKTIQEVVVKTGYGFVVFDDRRDADDAIYEL
NGKELMGARLQVEYAKPSGRSDKYDGGYRDRERERSRDRGGFSSRYGRPYNTDFRLVIEN
VSTRCSWQDIKDYFRQAGEVTFAKCHREKMGEGVVEFASSSDMKNALRKLDGSELFGKRI
KLISTYRGQSESRSRSRSRSPKKRTRSPASRSPVARSRSRSPRGRSRSRSFARRSVSRSR
SRSR
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgagtagatataagttattcattgggcatctctctcctgatgctcgtaccagagatcta
gaaagatttttcaaggatcatggcttctcgaaaactattcaagaagttgtagtaaaaact
ggttatgggtttgtggtttttgatgatcgtagagatgcagatgatgctatttatgaatta
aacggcaaagaattaatgggagcaagacttcaagttgaatatgctaaaccttcaggtcgt
tctgataagtatgacggtggttatagagatagagaaagagaaagaagtcgagatagggga
ggctttagttcaagatatggtcgaccatataacacagattttcgtctggtcatagaaaat
gtatcaacaaggtgtagttggcaggatattaaagattacttcagacaagctggagaagtt
acttttgcaaagtgtcatcgagaaaaaatgggtgaaggagtcgttgaatttgcgtctagc
agcgatatgaaaaatgcattgcgaaaacttgatggctccgagctttttggaaaaagaatt
aaactaattagtacttatcgtggacaatcggaatcacggtctcgaagtcgaagtcgttca
ccaaagaagcgcactcgctcgccagcttcacgatcacctgtggcacgctcacggtctcgt
agtcctcgcggtagaagcagatcacgaagctttgccaggcgatcagtttcaagatcaaga
agtcgatcaagatag
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