Hydra vulgaris (swiftwater hydra): 100212337
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Entry
100212337 CDS
T01080
Name
(RefSeq) lissencephaly-1 homolog
KO
K16794
platelet-activating factor acetylhydrolase IB subunit alpha
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg00565
Ether lipid metabolism
hmg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09100 Metabolism
09103 Lipid metabolism
00565 Ether lipid metabolism
100212337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hmg03036
]
100212337
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hmg04147
]
100212337
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100212337
Exosome [BR:
hmg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100212337
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_EML
Beta-prop_Vps41
Beta-prop_Nup120_160
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_WDR75_2nd
Beta-prop_RIG_2nd
Beta-prop_DCAF12
Beta-prop_IFT140_1st
PROPPIN
Beta-prop_WDR19_1st
LisH
LisH_PAC1
Ge1_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
Beta-prop_RIG_1st
WD40_like
Beta-prop_WDR11_2nd
End3
Pox_A_type_inc
Motif
Other DBs
NCBI-GeneID:
100212337
NCBI-ProteinID:
XP_002162244
UniProt:
T2MFT1
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All DBs
Position
10:complement(33035337..33112933)
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AA seq
406 aa
AA seq
DB search
MVLSAKQKEELNNSVADYLMQAGYMQTLDRFREEANIDNEIEKKYVNLLEKKWTSVVRLQ
RKVMELEARLSEMEKEVETGPSKKNRSVEDWIPRAPEKYTLSGHRSPVTKVLFHPVYSLM
LTSSDDATIKVWDYETGDYERTLKGHTDAVQDLSFDHPGKYLASCSADMTIKIWDFQTYE
CIKTLHGHDHNISSVSFMPSGDYIVSGSRDKTIKMWEVATGYCVKTFTGHREWVRCVKVS
QDGTLIASCSNDQTVRIWIIATGECKLELSDHDHVVETVAWAPQKSAQYINETTGNDKNN
FHSGSFLASGSRDKKIKVWDGNSGVCLFTLEGHDNWVREIMFHPGGKFLMSCSDDKTLRT
WDIKNQRCVKTLVAHDHFCTTFDFHNSAPIAVTGSVDLTAKIWDCR
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggtattgtcagcaaaacaaaaagaagaattaaacaattcagttgcagattatttaatg
caagctgggtacatgcaaactcttgataggtttagagaagaagcaaatatagataatgaa
atagaaaagaaatatgtaaatctccttgaaaaaaaatggacatccgtcgttcggttgcaa
agaaaggttatggaattggaagcaagactttcagaaatggaaaaagaggttgaaactgga
ccatcaaaaaaaaatagatcggtagaggattggataccacgtgctccagaaaaatataca
ttaagtggtcatcgtagtcctgtaacaaaagttttatttcatcctgtttatagtttaatg
ttgacttcttctgatgatgccacaataaaagtctgggattatgaaactggagattatgaa
agaacgttaaaaggccacacagacgccgtacaagatctatcgtttgatcatccagggaaa
tatttagcatcatgttccgcagatatgactatcaaaatatgggactttcaaacatatgag
tgtattaaaacactccatggtcatgatcataatatttcatcagtctcatttatgccatca
ggcgattatatagtgtcaggttctcgtgataaaacaattaaaatgtgggaggttgcaaca
gggtattgtgtaaaaacttttacaggtcatcgggaatgggttcgctgtgtaaaagttagt
caagatggaactctcatcgccagttgctctaatgaccagactgtacgcatttggataata
gcaactggagagtgtaagctcgaattatcagaccatgatcatgttgttgaaacagttgct
tgggcgccacaaaaaagtgctcaatatatcaacgaaacaactggaaacgataaaaataat
tttcactctggttcatttttggcatcaggttcgcgtgataaaaagataaaagtctgggat
ggaaattctggtgtatgtcttttcactctggaaggtcatgataactgggtgcgcgagata
atgtttcatccgggcggaaagtttttgatgagttgctcagacgataaaactcttcgtaca
tgggatatcaaaaatcaacgttgcgttaaaactttagtggctcatgaccatttctgcaca
acttttgacttccataactcagcgccaattgctgttacaggaagtgttgatttaacagca
aaaatatgggattgccggtga
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