Hydra vulgaris (swiftwater hydra): 100212411
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Entry
100212411 CDS
T01080
Name
(RefSeq) non-homologous end-joining factor 1 isoform X1
KO
K10980
non-homologous end-joining factor 1
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
100212411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmg03400
]
100212411
DNA repair and recombination proteins [BR:
hmg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
100212411
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XLF
XLF_CC
SARG
Motif
Other DBs
NCBI-GeneID:
100212411
NCBI-ProteinID:
XP_047136938
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All DBs
Position
7:38701934..38718292
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AA seq
296 aa
AA seq
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MSEKIQNTKKYDSISVQPWVYANCHSGEQLLLKTCFKKETLSYCVMCYFNSVIWEEEIIG
NDFLKKCKIFNPNIETSPAKLFTYLESCYNSCVFSLELKVSQQNDMLEISFKCKLQAGIP
YYWTFMMERSSPEKISNQLVTPLLLMVSELSRKQGELSELLKRKDKEIQDYKLQGSQVSK
QHLETTPFDEASFNNAWSCDILSQRKHLSIIDTPNLKELYKSVMINSHMESESDCKVITS
NDVQLFEYHDSLSSTSSVIKEQGLEEVEKVRREAREKRLQDEVDRKSKKKKRKIKI
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaaaattcaaaacactaaaaaatatgatagtataagtgtccaaccatgggtt
tatgctaattgccactctggtgaacagttacttttaaaaacatgctttaaaaaagaaaca
ttaagttactgtgtgatgtgctacttcaacagtgtgatatgggaggaggaaataatagga
aatgattttctcaaaaaatgtaagattttcaatccaaacattgaaacatcaccagcaaaa
ctgtttacttacttagaaagctgttataatagttgcgttttttctttggagttgaaggtt
tcacagcaaaatgatatgttagaaatatcatttaagtgtaaacttcaagctggaatacca
tattattggacttttatgatggaaagatcaagtcctgaaaaaattagtaatcaattagtc
actccacttcttttgatggtatcagaactttccagaaagcaaggagaactttcagaactt
ttaaaaaggaaagacaaagaaattcaagattataaactgcaaggttctcaagtgtctaaa
caacatctagaaacaactccatttgatgaagcatcttttaataatgcttggagttgtgat
attttgagtcaacgcaagcatctttcaattattgatacacctaatcttaaagaactctac
aaaagtgttatgattaattcacatatggaatcagaatcagattgcaaagtaattacttcc
aatgatgttcagttatttgaataccatgattcattatcatcaacttcgtcagtgataaaa
gagcaaggacttgaggaagttgaaaaagtgcgaagggaggcgcgagagaagcggctgcaa
gatgaagtggatcgaaaaagcaaaaagaaaaaacgaaagataaaaatctaa
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