Hydra vulgaris (swiftwater hydra): 100212542
Help
Entry
100212542 CDS
T01080
Name
(RefSeq) RGG repeats nuclear RNA binding protein A isoform X1
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hmg03041
]
100212542
Spliceosome [BR:
hmg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100212542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
HABP4_PAI-RBP1
zf-CCHC_2
zf-CCHC_3
MTBP_C
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
100212542
NCBI-ProteinID:
XP_002162674
UniProt:
A0A8B6XLF7
LinkDB
All DBs
Position
14:complement(33791557..33804742)
Genome browser
AA seq
512 aa
AA seq
DB search
MPAGDMESEYSIGVNNRFNGIDNDIIDDPFELIRVAQEKPSKKEKEVKGKGKKDAAKKSK
DSKPAKVETVAPIETAEKPKNESSDRRGGRGGGRGRGNGRGGFKSTDSPAEGGRKGFGGD
NSAPKNETSKGACRRCNEEGHFAKDCTQAPASNGGNKGACHKCGGEGHFARECPNTETAP
RSGACHKCGEEGHFARQCPKSGPPGGGACRKCNEVGHFARECPQNQNGTDSSSGFGAPSS
SSGFGAPSSGFGAPSGGFGAPTGGFGGSVGFSDSATDKGFGGSDSNNESRGGRGGFRGRG
RGRGGRGASRGREFDRKSGSNKSSSVKPTEKRDGSGAYNWGTPGEDNAGEEPQAVVSAPQ
SDGEAQEQGVESSEENKENTPEMTYEEYKKQLEESRSKPQYNLRKANEGVKVLKGKPLKK
PSDEENEADGSLFFPKKYYEEKLKTSGRVKEHMNLEFQFAVGENRHLEDRSRRGRGGRGG
RGGGRGGRKEDGGYASNSNIQLESKDEFPSLG
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgccagctggagatatggagtcagaatactcaattggagtaaataatagatttaatggt
attgataatgatatcatagatgatcctttcgagttaattcgagtagcccaagaaaagcca
tctaaaaaagaaaaagaggttaaaggcaagggcaaaaaggatgctgcaaagaaatctaaa
gattcaaaaccagctaaagtggagactgttgctccaattgagactgccgagaaacctaaa
aatgagtcctctgatagacgcgggggtcgcggaggcggtcgtggtcgtggaaatggtcgt
ggtggtttcaaatccacagattctcctgctgaaggtggtcgtaaaggttttggtggtgac
aactcagctccaaaaaatgagacttcaaaaggagcatgtaggagatgtaacgaagaggga
cattttgctaaagactgtactcaagcccctgcatctaatggtgggaataaaggagcttgt
cataaatgtggtggtgaaggacattttgcaagggagtgtcctaatactgaaactgctcca
agaagtggggcttgtcataagtgtggtgaagaagggcactttgctcggcaatgtccaaaa
tctggtccacctggaggtggagcatgtagaaaatgtaatgaggttggtcattttgctcgt
gaatgtcctcaaaatcaaaatggcacagattctagctctggttttggtgctccatctagt
agtagtggttttggtgcaccatcaagtggtttcggtgcaccatcaggtggctttggtgca
ccaacaggtggcttcggtggttctgtaggattttctgattcagctacagataaaggattt
ggaggttctgattcgaataatgaaagccgtggtggacgtggcggttttcgaggaagagga
agaggtcgtggtggacgtggtgcaagtcgtggacgtgagtttgatagaaaaagtggcagt
aacaaaagcagttcagttaagccaaccgaaaaacgtgacggttctggtgcttacaattgg
ggcactcctggagaagataatgcaggtgaagagccacaggctgttgttagtgcaccccaa
tcagatggtgaagcacaagagcaaggtgttgaatccagtgaagaaaataaagaaaatact
cctgagatgacctatgaagaatataaaaagcaacttgaggaaagccgttcaaaaccacaa
tacaatctgagaaaagctaatgaaggtgtaaaggttcttaaaggcaaaccacttaagaag
ccatctgatgaagagaatgaggcagatgggtcattgttttttcccaagaagtattacgaa
gaaaaattaaagacttcaggaagagtcaaggaacacatgaacttggaatttcaatttgct
gttggtgaaaatcgtcatcttgaggatagaagtagacgaggacgtggtggaagaggagga
cgcggtggtggacgtggcggaagaaaagaagacggcgggtatgcatcaaattccaacata
caattagaaagcaaggacgaatttccatccttgggataa
DBGET
integrated database retrieval system
