Hydra vulgaris (swiftwater hydra): 100212542
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Entry
100212542 CDS
T01080
Symbol
LOC100212542
Name
(RefSeq) uncharacterized protein LOC100212542 isoform X1
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hmg03041
]
100212542 (LOC100212542)
Spliceosome [BR:
hmg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100212542 (LOC100212542)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC
HABP4_PAI-RBP1
zf-CCHC_2
zf-CCHC_3
DUF8363
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
100212542
NCBI-ProteinID:
XP_002162674
LinkDB
All DBs
Position
07:complement(33464900..33478122)
Genome browser
AA seq
512 aa
AA seq
DB search
MPAGDMESEYSIGVNNRFNGIDNDIIDDPFELIRVAQEKPSKKEKEVKGKGKKDAAKKSK
DSKPAKVETVAPIETAEKPKNESSDRRGGRGGGRGRGNGRGGFKSTDSPAEGGRKGFGGD
NSAPKNETSKGACRRCNEEGHFAKDCTQAPASNGGNKGACHKCGGEGHFARECPNTETAP
RSGACHKCGEEGHFARQCPKSGPPGGGACRKCNEVGHFARECPQNQNGTDSSSGFGAPSS
SSGFGAPSSGFGAPSGGFGAPTGGFGGSVGFSDSATDKGFGGSDSNNESRGGRGGFRGRG
RGRGGRGASRGREFDRKSGSNKSSSVKPTEKRDGSGAYNWGTPGEDNAGEEPQAVVSAPQ
SDGEAQEQGVESSEENKENTPEMTYEEYKKQLEESRSKPQYNLRKANEGVKVLKGKPLKK
PSDEENEADGSLFFPKKYYEEKLKTSGRVKEHMNLEFQFAVGENRHLEDRSRRGRGGRGG
RGGGRGGRKEDGGYASNSNIQLESKDEFPSLG
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgccagctggagatatggagtcagaatactcaattggagtaaataatagatttaatggt
attgataatgatatcatagatgatcctttcgagttaattcgagtagcccaagaaaagcca
tctaaaaaagaaaaagaggttaaaggcaagggcaaaaaggatgctgcaaagaaatctaaa
gattcaaaaccagctaaagtggagactgttgctccaattgagactgccgagaaacctaaa
aatgagtcctctgatagacgcgggggtcgcggaggcggtcgtggtcgtggaaatggtcgt
ggtggtttcaaatccacagattctcctgctgaaggtggtcgtaaaggttttggtggtgac
aactcagctccaaaaaatgagacttcaaaaggagcatgtaggagatgtaacgaagaggga
cattttgctaaagactgtactcaagcccctgcatctaatggtgggaataaaggagcttgt
cataaatgtggtggtgaaggacattttgcaagggagtgtcctaatactgaaactgctcca
agaagtggggcttgtcataagtgtggtgaagaagggcactttgctcggcaatgtccaaaa
tctggtccacctggaggtggagcatgtagaaaatgtaatgaggttggtcattttgctcgt
gaatgtcctcaaaatcaaaatggcacagattctagctctggttttggtgctccatctagt
agtagtggttttggtgcaccatcaagtggtttcggtgcaccatcaggtggctttggtgca
ccaacaggtggcttcggtggttctgtaggattttctgattcagctacagataaaggattt
ggaggttctgattcgaataatgaaagccgtggtggacgtggcggttttcgaggaagagga
agaggtcgtggtggacgtggtgcaagtcgtggacgtgagtttgatagaaaaagtggcagt
aacaaaagcagttcagttaagccaaccgaaaaacgtgacggttctggtgcttacaattgg
ggcactcctggagaagataatgcaggtgaagagccacaggctgttgttagtgcaccccaa
tcagatggtgaagcacaagagcaaggtgttgaatccagtgaagaaaataaagaaaatact
cctgagatgacctatgaagaatataaaaagcaacttgaggaaagccgttcaaaaccacaa
tacaatctgagaaaagctaatgaaggtgtaaaggttcttaaaggcaaaccacttaagaag
ccatctgatgaagagaatgaggcagatgggtcattgttttttcccaagaagtattacgaa
gaaaaattaaagacttcaggaagagtcaaggaacacatgaacttggaatttcaatttgct
gttggtgaaaatcgtcatcttgaggatagaagtagacgaggacgtggtggaagaggagga
cgcggtggtggacgtggcggaagaaaagaagacggcgggtatgcatcaaattccaacata
caattagaaagcaaggacgaatttccatccttgggataa
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