Hydra vulgaris (swiftwater hydra): 100212713
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Entry
100212713 CDS
T01080
Name
(RefSeq) E3 ubiquitin-protein ligase NRDP1
KO
K11981
E3 ubiquitin-protein ligase NRDP1 [EC:
2.3.2.27
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100212713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hmg04131
]
100212713
04121 Ubiquitin system [BR:
hmg04121
]
100212713
03029 Mitochondrial biogenesis [BR:
hmg03029
]
100212713
Enzymes [BR:
hmg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100212713
Membrane trafficking [BR:
hmg04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
100212713
Autophagy
Mitophagy
PINK1-Parkin associated proteins
100212713
Ubiquitin system [BR:
hmg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100212713
Mitochondrial biogenesis [BR:
hmg03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
100212713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP8_interact
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
U-box
zf-rbx1
zf-Nse
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
zf-ANAPC11
Sina_ZnF
zf-RING_5
zf-RING_10
SlyX
Motif
Other DBs
NCBI-GeneID:
100212713
NCBI-ProteinID:
XP_002155270
UniProt:
T2M5Z9
LinkDB
All DBs
Position
8:complement(32443231..32444393)
Genome browser
AA seq
318 aa
AA seq
DB search
MGYDVNRFNGCEVDEELLCPICNGVLEDPVQAPVCEHAFCKACIQEWLNHQLTCPVDRQS
ITTAQLKPVPRILKNLLARLTISCNNSSFGCTTNVKLDALHIHLNECNHNPKRPVRCDHG
CNLIIPLDEIGQHNCVKELHSIINAQSVQINEIKDQVIDFQNQINELRREVNVVTDVMRG
FHMSTIALPPLQRGFTDCTDEVLQWLQTLPKAKVTRWGGMISTPDAVLQAVIRRSLSDSG
CPSYILDDLMENAHERRWSQGLSTLETRQINRRRYEQYIARRIPGKQAVVVMACENHHMG
MLLVQEPGIVMIFAHGIE
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgggttatgatgtaaatcggtttaatgggtgtgaagttgacgaagaattactatgtcca
atatgtaatggagttcttgaggatcctgttcaagcaccagtctgtgagcatgcattctgt
aaagcatgtatacaggaatggttgaaccatcaattaacttgtcctgttgataggcaaagt
ataactactgctcagttaaaacctgttcctcgaattctaaaaaatcttcttgcaagactt
acaataagttgtaataattcgagttttggatgtacaacaaatgtgaagttagatgctcta
catattcatctgaatgagtgtaatcataaccctaagcgacctgttcgttgtgatcatggc
tgcaatttaattattcctcttgatgaaattggacaacataactgtgttaaagaattacat
tctatcattaatgcccagagtgtgcaaatcaatgaaataaaagatcaagtaattgacttt
cagaatcaaataaatgagttaaggcgtgaagttaatgttgtaacagacgtcatgagaggt
tttcacatgtcaaccattgcattaccacctcttcagcgaggttttacagattgtactgat
gaagttttacagtggctccagacgttaccaaaagcaaaagttacacgctggggtggaatg
atatcaactcctgatgctgttttacaggcagttattcgtagatctctttcagatagcgga
tgtccatcctacattcttgatgatctaatggaaaatgctcatgagcgtcgttggtcacaa
gggttaagtactttagaaactcgtcaaataaacaggcggcgatatgaacagtatatagca
cgacgcattccaggtaaacaagctgtcgtagtaatggcatgtgaaaatcatcatatgggt
atgttacttgtacaagaacctggaattgttatgatatttgctcatggcattgaataa
DBGET
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