Hydra vulgaris (swiftwater hydra): 100212882
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Entry
100212882 CDS
T01080
Name
(RefSeq) protein Smaug homolog 1 isoform X1
KO
K27396
protein Smaug
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmg03019
]
100212882
Messenger RNA biogenesis [BR:
hmg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
100212882
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
PHAT
DUF3287
DUF4508
Motif
Other DBs
NCBI-GeneID:
100212882
NCBI-ProteinID:
XP_002170483
UniProt:
T2MC61
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Position
5:complement(4246486..4264605)
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AA seq
627 aa
AA seq
DB search
MMGVKTQRKIQFCFPERHSLHTRNEVMKPAHIFRDQVNTVAQWFDQWNDIEQTIACYSLL
KRIGHTQARFLSLVLEHTFRDTAYEVNILEREANGKEFLRSLCHERKEIAVQQLLLHLPL
LHPGNDEARHEYLKLLPKILSHSLEYSIHKEECRQLLSLALVHPAFVPEERNSLTWWLGL
IEEKGDSINETCRPPPGFVNPALHTPLTSSKSCQVWGTNHHAPIKSSYSHKPSGQTNGWK
GQTQLTHTDSGICTSFDNGSNNIYNAAGGNQEALEDKYTRAYRSNSFPVDPSNAHTTVSP
QSSVDSDDETLRKESTNENAHPGMKDIPLWLKSLRLHKYAHIFTDVTYEEMMSFSDEYLE
KHGVTKGARTKILLCIQKLKDREETLEQLEKEVLQLGCLPHVLAELKSILVTPIKPHKNE
NTNEESFNEGIKTDKCNNFEDLPLQIIRVMGKACTQILVTQPDEQCCITYLGLLERVLSH
EAFSQEDKRRFHSWKLQCQKLARDFAMNRKLAGIEKGPRNWYDPIGGVHRKNSTHRINQQ
KAGVSYPFSGGSLVGSSKSKLTGSISYHPNTRASLSKEPLTRTKSAPTTRPHGQQDMEAI
NKSLESIGLSMTNHALEDASEKVDELY
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgatgggtgtgaagactcaaagaaaaattcagttttgctttcctgaacgacacagctta
cacacacgcaatgaagtaatgaaacctgctcatatctttcgtgatcaagttaacacagtg
gcacagtggtttgatcaatggaatgatattgaacaaactatagcatgttattcattgctg
aaaagaatcggtcacacacaggcaagatttttatctcttgttcttgaacatacatttcga
gacacagcctatgaagtcaatattctggaaagggaagccaatggaaaagagtttcttcga
agtctgtgccatgagagaaaagaaatagctgtacaacaattacttttgcatttaccttta
ttacatcctggaaatgatgaagccagacatgaatacctaaaattacttcctaaaatttta
tctcactctcttgaatattctattcacaaagaagaatgcaggcaactgctttcacttgct
cttgtccatcctgcttttgttcctgaagagcgtaattcattaacttggtggctaggttta
attgaagagaaaggagatagtattaatgaaacttgtcgcccaccacctggatttgttaac
cctgccttgcacaccccattaacaagctcaaaatcttgtcaggtatggggtactaatcat
catgctcctattaaaagttcatattcccataaaccatcaggtcagactaatggttggaag
ggccaaactcaacttacccatacagactcaggcatttgtacttcatttgataatggttca
aacaacatatacaatgctgcaggcggtaaccaagaagcattagaagacaaatacacgcga
gcttacagatcaaattcttttcctgttgatccgtcaaacgcacatactacagtttcacca
caatcatctgtggatagtgatgatgaaactctcagaaaagaaagtactaatgagaatgcg
catccaggcatgaaagatattccattgtggctaaagagtttacgtttacacaaatatgca
catatatttactgatgttacttatgaagaaatgatgtctttttctgatgagtatcttgaa
aaacacggagtaacaaaaggagcacgtactaaaatcttgctctgtatacaaaagttaaaa
gatagagaagaaacattggaacagttagaaaaggaagtgttgcagctgggttgcttgcca
catgttttagctgagcttaaaagtattttagtcacaccaatcaaacctcacaaaaatgaa
aatactaatgaagaaagttttaatgaaggtataaaaactgataaatgcaataatttcgaa
gaccttcctttgcaaataattcgtgttatgggaaaagcttgcacacaaattttagtgaca
caacctgatgagcaatgctgtattacatatcttggtcttttggaaagagttttgtctcat
gaagctttttcacaagaagataaacgcaggtttcattcatggaaacttcagtgtcaaaaa
cttgctagagattttgctatgaatagaaaacttgctggaattgagaaagggccaagaaat
tggtatgatccgattggtggggttcatagaaagaactcaacacatcgaattaaccaacaa
aaggcaggtgtatcttatccattttctggtggttctttagttggaagtagtaaatctaaa
ttaactggctcaattagctaccacccaaacacgagagcaagtttatcaaaggaaccatta
accagaactaaatcggctcctacaacgcgtcctcatgggcaacaagacatggaagctata
aacaaaagccttgagagtataggtctaagtatgactaaccacgcattagaagatgcgtca
gagaaagtagatgaattgtattga
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