Hydra vulgaris (swiftwater hydra): 100213024
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Entry
100213024 CDS
T01080
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 homolog isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmg03019
]
100213024
Messenger RNA biogenesis [BR:
hmg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100213024
Factors involved in mRNA localization
Other mRNA localization factors
100213024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
SidC_lipid-bd
Motif
Other DBs
NCBI-GeneID:
100213024
NCBI-ProteinID:
XP_047145316
LinkDB
All DBs
Position
2:13835942..13925343
Genome browser
AA seq
1265 aa
AA seq
DB search
MATLEEAIENVRRLENLALYNDEQPTIEASPASITYNFDFDTNFCDKEAFITGISRYMEE
AAIHQQLNDMLETGEQYACMLYTWRCLSRAVPTAKNDEQSNRTEMYQATLDVMKPHIQKL
KDFMYFHESAITTFCSEIKKLCHPERKKDFISETHLLALGKCINMFAVLGSLKNMKACLN
NDFAFYKRAETFLKQTTNDARALQESQNLTMFLATHDIITTKLKAGLEDIEGSDEVLADI
IQQACYFFEFKMYVLPKEKHLLLKVIGFTLFLLDGKNANVNKLDQKRRININKIDKFFKQ
LPVVPLYGDMQISLISYVKNCPHFDASKWSCASENAEEKIGMMQYNLTGKIDSIHDEHVK
FMSELSKINNEYNNAKVKKTLSIEECRGLTDLALRGLRLISSWNAQVMELFYWKLLHLTD
KYSNPQCPETAEEYERATRYNYDSNEKFALVQTMSMIKGLSGIMFRLEGIFSNAIRCFIH
AELQDFVQNTMREPLRKAAKSSKKTLMKTVMMAIRETVIDLSKSAVEDPAVRGEKDPKNG
FRIDIPFRSVGPSSTQLYMLRTMLESLSSDKAGRGTKSFRKDLDSSTLNSIDVFLRSSFF
YPYLLKFSQSLKECSDLSQLWYREFFLELTMGKRIQFPIEMSMPWILTDHILQASDAAMM
EYVLIPLDLYNDSADCALNRFKKQFLYDEVEAEVNLCFDQFVFRLSEDIYSHYKQLASSI
YLNKRFRSELEKRYIDEKRPKPGDELLPYPPTNRFVTILAQRHVQLLGRSVDLHKLLEQR
LTISLRKSLDVAVSRFESKPLCYIMELETLTEICRLTHFLLSKHISLPNFESMFMEANHA
VSAPYGRITLHVFWELYYDFLPNYCYNSSTNRFTRTTLSFVKEEPRDQPPKASNVHLYGN
KDLHSAYTNIFSLNENFVGSEHFGCIVRLLSYQGIAVVIEELLKVVKNLFQSTIQQYVKV
LMDGMPSKCGLPRYEYGSAGVLEFYNANLESIMQYRDLKTEVFQAFREVGNIIIFCLQVE
EQMTQEEIADLLHAAPFQGIIPRPFVKENNCLEKDTVEAKMKRLEAQYAAFQLVSLVTRY
GTDEQRLNSEESDVITRERLCCGLSLFEVVLRRIQSFLDDDVWKEPTPSNGVMSIEECKE
FHRLWSAIQFIYCKPLGQNEITVEETFGESLNWAGCTIITLLGQEHRFEALDFSAHLLRV
QEIDARQETVAGVDLKRLVERIKQYRTINNEIFAVLNRYLKSGESSFEHVRCFQPPIHQA
FMSAV
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcttgaagaagcaatagaaaatgtccgccgattagaaaatttagctttatac
aatgatgagcagccaacaattgaagcctcgccggcttccattacttacaactttgatttt
gacacaaacttttgtgataaagaagcatttattactgggatcagtcggtatatggaggaa
gctgctatacatcaacagctgaatgacatgctggaaacaggagaacaatatgcttgtatg
ttatatacttggcgatgtttatcaagagcagttcctacagcaaaaaatgatgaacagtcc
aacagaacagaaatgtatcaagctacattagatgtaatgaaacctcatatccagaagtta
aaagattttatgtattttcatgaatcagctataaccacattctgttcagaaataaaaaag
ctttgtcatccggaaagaaaaaaagattttatctcagaaacacacttattagcacttgga
aaatgtataaacatgtttgctgtattaggatcattgaaaaatatgaaagcatgtctgaat
aatgattttgcattttataagagagctgagacatttcttaaacagaccacaaatgatgct
cgagcactgcaagagtcacaaaatcttactatgtttcttgcaacccatgatataattact
actaaattaaaagctggtcttgaagatatagaaggaagcgatgaagttttagctgatatt
attcagcaagcatgctatttctttgaattcaaaatgtatgttctaccaaaagaaaaacat
cttttacttaaggttataggattcaccttgtttctattagacggaaaaaatgctaacgtt
aataaacttgatcaaaagcgaagaatcaacattaataaaattgataagttttttaagcaa
ttaccagttgttccactttatggagatatgcaaatctcacttatttcatatgtcaaaaat
tgtccgcatttcgatgcatctaaatggagttgtgcatctgaaaatgcagaggagaagatt
ggcatgatgcaatacaatttaactggaaaaattgattcaattcatgatgagcatgttaag
tttatgtcagagttatcaaaaataaataatgagtataacaatgctaaagtaaagaagact
ctttctattgaagaatgtcgtggactaacagatttagctttgcgtggcttgcgattaata
tctagttggaatgcacaagttatggagctgttttactggaaactactccatcttactgat
aaatactctaatccgcaatgtcctgaaactgctgaagaatacgagcgtgcaactcgttat
aattatgatagtaatgagaagtttgcacttgtacagactatgagtatgattaaaggactt
tcaggaataatgtttcgtcttgaaggaattttttcaaatgcaattcgttgttttattcat
gctgaactgcaagactttgtccaaaatactatgcgtgaaccattgcgaaaggctgctaaa
agttccaaaaaaactctaatgaaaacagtcatgatggcgatccgggagacagttattgat
ttgtcaaaatcagctgttgaagaccctgctgtaagaggagaaaaagatcctaaaaatgga
tttcgtattgatattccatttagatcagtagggccatcatcaacccagctctacatgctc
agaaccatgttggagtcactcagctctgataaagcaggcagaggaacaaaaagtttcaga
aaagatctagacagctctacacttaattctattgatgtatttttgcgtagctctttcttt
tatccttatctattgaagtttagtcaatcattaaaagaatgctctgatttatctcaatta
tggtacagagagttttttcttgagttaacaatgggaaaacgtattcaatttccaattgag
atgtcgatgccttggattctgacagatcatattttacaagcaagtgatgcagctatgatg
gaatatgttcttatacctcttgatttatacaatgacagtgcagattgtgctttaaatcgt
tttaagaaacagtttctttatgatgaagttgaagctgaagttaacttgtgttttgaccaa
tttgtgtttcgacttagcgaagacatttattctcattacaagcagctggcatccagcatt
tatctcaataaacgatttcgaagtgaacttgagaaaagatacattgacgaaaagcgccct
aagcctggagacgaattgttaccatatcctccaactaatcggtttgttacaattttggct
cagcgccatgttcaacttctaggaagatcagtggacttacataaacttctggaacagcgt
ctgacaatatcattaagaaaatcactagatgttgctgtgtcgagatttgaaagtaaacca
ttatgttatataatggagcttgaaacactgacagaaatttgtcgcttaacacattttctt
ctctccaaacatatcagtctacctaattttgaatcaatgtttatggaagctaatcatgct
gtttctgcaccatatggaagaataactttgcatgtgttttgggagttgtattatgatttt
ttgccaaattactgttataattcgtcaactaatagattcacaagaacaacactctccttt
gttaaagaagagcctcgtgatcagcctccaaaagcatcaaatgtccatctctatggaaac
aaagatttgcacagtgcatacacaaatattttctcattaaatgaaaactttgtaggatct
gaacattttggatgtatagtgcgattgcttagttatcaaggaatcgctgttgtaattgaa
gaacttttaaaagttgttaaaaatttgtttcaaagtacaatccaacaatatgttaaagta
ttaatggatggaatgccaagtaaatgtggtctcccacgatatgagtatggctccgcaggt
gttctggaattttataatgcaaatctagagtcgattatgcaatatcgtgatctaaaaaca
gaagtgtttcaagcatttagagaagttggcaacatcattatattttgcttgcaagttgaa
gaacaaatgacacaagaagaaattgctgatttgttgcatgctgctccatttcaaggaatt
ataccacgcccatttgtaaaagaaaacaattgtttagaaaaagatactgttgaagcaaaa
atgaaacgtttagaagctcagtatgctgcctttcaacttgtttctttggttactcgatat
ggaacagatgagcaacgtttaaacagtgaagaatctgatgtcattactagggaaagacta
tgttgcggtttatctctttttgaagttgttttacgtagaattcagtcgtttttggatgat
gatgtctggaaagaaccgactccttcaaacggtgttatgagtattgaagaatgcaaagaa
tttcatcgcttatggagtgccattcaatttatttattgtaaaccactcggacaaaacgaa
ataactgtagaagaaacttttggagagagtttaaactgggcaggatgtactataataacc
ttattgggccaagaacaccgttttgaagcacttgatttttctgcacatcttttaagagtt
caagagatagatgcaagacaagaaactgtcgccggtgttgatttaaaacggcttgtggaa
agaattaaacaatatcgtacaataaataatgaaatatttgcagtgttaaataggtacttg
aaatcgggagaatcttcgtttgaacatgtgcgctgttttcaaccacctatacatcaggct
tttatgtctgctgtgtaa
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