Hydra vulgaris (swiftwater hydra): 100213341
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Entry
100213341 CDS
T01080
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg04517
IgSF CAM signaling
hmg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100213341
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100213341
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hmg04812
]
100213341
Cytoskeleton proteins [BR:
hmg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
100213341
Intermediate filaments
Intermediate filament-binding proteins
100213341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CSN5_C
Motif
Other DBs
NCBI-GeneID:
100213341
NCBI-ProteinID:
XP_047138071
LinkDB
All DBs
Position
8:10086933..10156229
Genome browser
AA seq
2326 aa
AA seq
DB search
MGEVMANIYRDDLFLEKGCDIWMDNQSSALLFEKSKISTLRGERENVQKKTFTKWVNSHL
QKVEAHINDLYHDFQDGRQLILLLEILSATKLPRPSKGRMRIHFLENVEHALTFLKKKEV
QLTNIGNHDIVDGNPKITLGLIWTIILRFQIQDLMIETDSLEQRSAKDALLLWCQSKVQG
YPNVNVTNFTTSWRDGFAFNAIIHKHRPDLIDMKKLVKEEPIKNLNMAFSTAERELGVFP
LLDAPDVCVDFPDEKSIMTYVATFYQYFSKMKQVEVSGSRIQNVIKQVVDNENLIKKYEC
LSEALMEWIQARILILQNHSFGNTLLAVQQQLTEFNLYRTQEKPPKYVDKGNIEVLMFEI
TSKLRLNHQKMYNPPESLMVNEINKAWQQLEKEEHSCEVALRKELIRQQQLEQLASRFSR
KAKLRETWLKENSKLLQMDNFGNDLPSVEASVKKHEAIDTDIKAYESRVVGLFLLCDQLK
KENYHKIEFFMQWTNQIKVNWEQLLILLKFRSSRLEKHLQIYKIFQEMIYINDWMNDIKT
ALQSEDFGKHLVSVEDLLQKHSLLEADISVQSDRVKSTNNNADIFLETVLKDEADGYKAN
IEVIKSNQSDLLRNYTNLCNLSSERKQRLEESLQLHTFYRDLEEEDIWLSEKDYFVSSTE
YGHDLCTTAYLLHQHKTLEEELAAKRQQTDALFKHGNVLVANMPYATARINELSQKLKEK
WKSVDDASKERCKKLKEVLNLHQFFSDCREIEADMNEFEAPVANDDWGQDEQSVGELIRN
YEKLHNEVLTLENSIKSVEELRTSSLEKEVQESPEVLNAIDRLKEHFLTLQSKIDIRMKK
LNECFALFKLYSEADIVRSWVTENSSQLKTYLKLERSYDLERCTIVQHKFEGFEQELTVY
KERMKAVNDMADKILQTDSDASQQFSERIGNLNSMWDSLLHEADAKKKELNACLLIQTIY
SEFTETQSWIVEKTGLLASVEDPGADLSSVIALQRRLLSIERDIASLPLKMQDLHSRAVS
LSKEYPEEAISIQARFDDMQSAWENLSKMVKEKNEFLLETGELKRFIISLDEFLSWLQHI
SEACSSEDLPQSVSENESLLDAHFEIKTIIEQHVDDYNLLVSEGPKYIHDDHNVLQTQSL
RQQMSDLRDDWTRLHELWHARKILLEQSMNHQLFLRDSKQSEAILGQQELFLSKQRTTPT
ADALQEEIKKLEEYFNKMATHDDKINHLLIFAEQLCQNNHYAKEKIVEKANCIDECRKKN
RDLAENLLAELLQDLQLKQFLEDSSEVIDWMNERLQSASDESYKENTNIRSKLIKHTVFE
AELDANKVKMDILKENGQDIIKSNPNSMQVVKERLENIDALWEKLNKTSKEKRMYLTEAS
RQQQFNAEIVNLDKWIIEIDNQVTDSETGTDIVSARELFDKHKSIESDVSFKKHRMIDLC
ANPEVDEEKIVAEKRTMEERFQSLEKHLAEKREILENSLNYYQYKRDVEDAQVWIDEVEL
TLQSKNFGNRLHDVQRSKKRHLILCNKISCYEPFIVSKIDHGNAMITENHPRSNEIELLK
STLSAKWNCLKDLSNEYQANLDEALVAKQFFFDAAEAESWLSEKELFLIGDDRGKDQEQV
QNMIKSHIALENTIALYADTVAESATTVQGLITRNHPESEAAQLKQARLEQLYLHIKELV
SERRDKLDENLKLFLFQREVQDLESWIADREVIASSQDIGQDYDQVQMLEERFARFSNET
RVTGKDRLLTVNAVVDLLIAAGHSDSAIISEWKDKLNRLWDCLLELLDTRKELLVAGHEY
HRFFHIAKETLSLIDEKEKTITEDLGRDQQSVYTLQRYHKAFESDLKPLGLQVEGIHVFA
SKLKLSYAGNPHNMIIDKEAEVVKAWQNLLQRVSVRGLRLEQSNVYQEWLMQVQDLLLWI
QDIRMQIESDDKPKDIPDCDHIMSIHQGRKSEMDTKEEKFNNVFKVANELSEFFYIKEKV
ENLREKKTMLEEEWDVHWEDLQLTSEVMQFAREAHLAEEWVIQNGHFISGKEFDSLSVDE
IMKLIEKHSNFEHLLSNQQERFHALERLTTFELRNARQKQVEAAKREKEEKERIERELAE
IKQLELEAQRIKEQNERMIQEEDILIQQVSVPITESTPPSSPSQLSPHPIVNENGNTNKM
NGNEIKMKGLILRKPTKEAQNKKAHQRVWKEYYAVLKNYFLFFYKDEQDALQGVNLQSEF
NLSESQVEVASDYHKKKYTFRIKLSNGCEYLINAKSVDEMSLWIQNIRGNTIDTSITNED
SRKRLSMMNSPQISSIPNQQDEVQKKDKEKKRSSTSLFKIRKAGKP
NT seq
6981 nt
NT seq
+upstream
nt +downstream
nt
atgggggaagttatggctaatatttatcgtgatgatctttttttggagaaaggttgtgat
atatggatggataatcaatcttctgctttactttttgagaaatccaaaatatctaccctt
cgaggtgaacgtgaaaatgtccaaaaaaagacttttacaaaatgggtcaattctcatttg
caaaaagttgaggctcacattaatgacttatatcacgattttcaagatggtcgccaactt
atactgttattagaaatactttcagcaactaaattaccacgtccaagcaaaggtcgaatg
aggattcacttccttgagaatgtggagcatgctttaacttttttaaagaagaaggaagtt
cagctcactaatatcggaaaccatgatatcgttgatggaaatccaaaaattacattaggg
ttgatctggacaatcatattaagatttcagattcaagatctaatgattgaaacagattct
ttagagcagagatctgcaaaagatgctcttcttctttggtgtcaatcaaaagtacaaggt
tatccaaatgtaaatgtcacaaattttacaacaagttggagagatggttttgctttcaat
gctattattcacaagcacagaccagatttaattgatatgaaaaagctggttaaagaagaa
cctattaaaaatttgaatatggcattttctacagcagaacgagagcttggtgtttttcct
ctacttgatgctccagatgtttgtgttgacttccctgatgaaaagtcaataatgacttat
gttgcgactttctatcagtatttctctaaaatgaaacaagtagaggtttctggcagtcgc
atacaaaatgtaatcaaacaagtcgtagacaatgaaaatttaataaaaaagtacgagtgc
ttaagtgaggctttaatggaatggattcaagctcgcattcttattcttcagaatcattct
ttcggaaacacattacttgctgtgcaacaacaactaacagagtttaatttgtatagaaca
caagaaaagccaccaaagtatgttgacaaaggcaatattgaggtattaatgttcgagatt
acaagtaagcttcgattaaatcaccaaaaaatgtacaatcccccagaatctttaatggta
aatgaaattaataaagcttggcaacaacttgaaaaagaagaacacagttgtgaggttgct
ttgagaaaagaacttattcgacaacagcagcttgaacaacttgcaagtcggttttcacga
aaagcaaagcttcgtgagacttggctcaaagaaaatagcaaactattgcaaatggataac
tttggaaatgatttgccatctgttgaagcctctgtgaaaaaacatgaagcaattgataca
gacattaaagcatatgagtcaagagttgttggcctttttcttttatgtgatcaattaaaa
aaagaaaactatcacaaaattgagttttttatgcaatggacaaaccaaattaaagtgaat
tgggaacagcttttaatattacttaaatttcgaagttcaagacttgaaaaacatcttcaa
atttataaaatttttcaagaaatgatttatatcaatgattggatgaatgacattaagact
gctcttcaatctgaagatttcggaaaacatcttgtaagtgtagaagaccttctgcaaaaa
catagtttgcttgaagcagatatctctgtccaatcagatcgagttaaatcaactaataat
aatgctgatatatttttagaaacagttttaaaagatgaagcagatggatataaagcaaat
attgaagttataaaatccaaccaaagtgacttactgagaaactatacaaatttgtgcaat
ttatcatcggaaagaaaacagcgattagaagaatctctacagctgcacacattttataga
gaccttgaagaagaagatatatggcttagtgaaaaagactattttgtttcttcaacagaa
tatggtcatgatctttgtacgacagcatatttgttacatcaacataagactttagaggaa
gagctggcagccaaaagacaacaaactgatgctttatttaaacatggaaatgtattagtt
gctaacatgccatatgctacagcaagaataaatgagttgtcacaaaaattaaaggaaaaa
tggaagtctgttgatgatgcttcaaaagagcgttgtaaaaaacttaaagaagtgttaaat
ctccatcaattttttagtgattgtcgagaaatagaggcagatatgaacgagtttgaggct
ccagttgcaaacgatgattggggacaagatgaacaatcagttggtgaattaataagaaat
tatgagaagcttcacaatgaagttcttactttggagaattcaatcaaatctgtcgaagaa
cttagaacaagttcactagaaaaagaggttcaagaatctcctgaagttctaaatgctatt
gatagactgaaagaacactttctcactctgcaaagcaaaattgatatacgaatgaaaaag
ttaaatgaatgttttgccctattcaaattgtatagtgaagcagatattgtaagatcttgg
gttactgagaatagctcgcaactcaagacatatttaaaattggagcgctcttatgattta
gaacgatgtactattgttcaacataagtttgaaggatttgaacaggagttgactgtatat
aaagaaagaatgaaagcggttaatgatatggctgataaaatacttcaaactgactctgat
gcatcccaacagttctcggaaagaatcgggaacctaaacagcatgtgggattcattattg
catgaagctgatgcgaagaaaaaagaactcaatgcatgtttgctcattcaaactatttat
agtgaatttactgaaactcagagctggattgtagaaaaaactggtttacttgcatcagtt
gaagatcctggagctgatttatcaagtgttattgctttacaacgtcgactgctcagtatc
gaacgtgacattgcttcactacctttaaagatgcaagatcttcactctagagcggttagt
ctctcaaaagaataccctgaagaagccataagtattcaagccagatttgatgacatgcag
tccgcttgggaaaatctttcaaaaatggttaaagaaaaaaatgagtttttattagaaact
ggggagctcaaacgttttataatttctcttgatgaatttctttcttggttgcaacatata
tcagaggcttgttcttcagaagatttacctcaaagtgtatctgaaaatgagtcattgtta
gatgctcattttgagataaagactataatcgagcaacatgttgatgattacaacttgtta
gtttctgaaggtccaaagtatattcacgatgatcataatgttcttcagactcagtcatta
cgacaacaaatgagtgatttgagagatgattggacacgactccatgaattatggcatgca
aggaagattttacttgagcagagcatgaatcatcaactttttttacgagattctaaacaa
agtgaagctatacttggacagcaggaactctttttgtctaaacaacgtactactcctact
gcagatgcattgcaagaggagattaagaagttagaagagtatttcaataagatggccact
catgatgataaaattaatcatcttttgatatttgctgaacaactttgtcaaaataatcac
tatgctaaagaaaagattgtggaaaaggctaattgcattgatgaatgtcgtaagaaaaat
cgagacctagctgaaaatctgcttgctgagcttttgcaagatttgcagctaaaacagttt
cttgaggattcaagtgaggtaatagactggatgaatgaacgtttacaatcagcatcagat
gaatcatataaggaaaatacaaacattagaagtaagctcataaaacatacagtgtttgaa
gctgaacttgatgctaataaagtaaaaatggatattttaaaagagaatggccaagatata
attaaatcaaatccaaattcaatgcaagttgttaaggagcgcttagaaaatattgatgca
ttgtgggaaaaattaaacaaaacatcaaaagaaaagagaatgtatttaacagaagctagt
cgtcagcaacagtttaatgcagagattgtaaaccttgacaaatggatcattgaaattgac
aatcaagttactgatagtgaaactggtaccgatatagtatcagccagagaactttttgac
aaacacaaaagtattgagtccgatgtttccttcaagaaacatagaatgattgatctttgt
gcaaacccagaagttgatgaagaaaagattgtggctgaaaaaaggacaatggaagaaagg
ttccaatccttagagaagcatttagcagagaagagggagattttagaaaattctctcaac
tattatcaatacaagcgtgatgttgaagatgctcaagtatggattgatgaagttgagtta
acactgcaatcgaaaaattttggaaatcgattacatgatgttcagcgttcaaaaaaacga
catttgatactatgcaataaaattagttgttatgaaccttttatagtatcaaaaattgat
catggtaatgccatgattacagaaaatcacccaagatccaatgaaatagaattgcttaaa
tctactttaagcgcgaaatggaactgtttaaaagatctgtctaatgagtatcaagctaat
cttgatgaggctttagttgcaaagcagtttttttttgatgctgcagaagcagagtcttgg
ttaagtgaaaaagaactgtttttaattggcgatgatcgaggtaaagaccaagagcaagtt
caaaacatgataaaaagtcatatagctcttgaaaatacaattgcactttatgcagatact
gttgcagaatctgcaactactgtgcagggtcttattacacgtaatcatcctgagagtgaa
gctgcacaactgaaacaagcgagactagaacaactttatttgcatataaaagagttagta
agtgaacggcgggacaaacttgatgagaatttaaaacttttccttttccaacgagaagta
caggacctagaatcatggattgctgacagagaggtgatagcaagctctcaagatattgga
caagattatgatcaagtacagatgttagaagaaagatttgcacgtttttcaaatgagact
agagtaaccggcaaagatagattgctcactgttaatgctgtagtggatctgttaatagct
gcaggacattcagactctgcaatcatatctgaatggaaagacaaactaaatcgattatgg
gactgcttgttggagcttcttgatacaagaaaagaacttttagttgcaggtcatgaatac
cacagattttttcacatagctaaagaaacattgagcttaatagatgaaaaagaaaaaact
attacagaggatttaggaagagaccagcagtctgtttatacgcttcaaagatatcataaa
gcattcgaatctgatctgaagcctttagggctgcaagttgaaggtatccatgtttttgct
tcaaaattaaagctgagctatgctggtaacccccacaacatgattattgataaagaagcc
gaagttgtaaaagcttggcaaaatttgctacagcgtgtcagtgttcgtggattaaggctt
gagcagtcaaatgtgtaccaagagtggttgatgcaagtccaagatcttttactttggatt
caagacattagaatgcagatagaatctgatgataaaccaaaggacataccagattgtgac
cacatcatgagcattcatcagggacgcaaatcagaaatggatacaaaagaggaaaagttc
aataatgtttttaaagtagcaaatgaactctctgaatttttttatataaaagaaaaggtt
gaaaatttgcgtgagaaaaaaacaatgcttgaagaagaatgggatgttcattgggaagat
ctccaattaacatctgaggttatgcaatttgcaagagaagctcacttagccgaagaatgg
gttattcaaaatggtcactttatttctggaaaagagtttgatagtttatcagtggatgaa
ataatgaaacttattgaaaaacattcaaactttgaacatttgctatctaatcaacaggag
cgttttcatgccttagaacgtctaacaacgtttgaattaagaaatgccagacaaaagcag
gttgaagctgctaaaagagaaaaagaagaaaaagaacgaattgaacgagaacttgcagaa
attaaacagttggaacttgaagctcaaaggataaaagaacaaaacgaaagaatgattcaa
gaagaagatattctaattcagcaagtttcagtcccgataacggaatcaactcctccatca
tcaccatctcaactgtcacctcatcccattgttaatgaaaatggtaatacaaataaaatg
aatggaaacgagataaaaatgaagggtttaattttaagaaaacccactaaggaagctcaa
aataagaaagcacaccagagggtttggaaagagtactatgcagttttgaaaaactatttt
ttatttttttacaaggatgagcaagatgctttgcagggtgttaatttgcaatccgaattc
aatctgagcgagagtcaggtagaagtggcttcagattaccacaagaaaaaatatacgttc
cgaataaaactatcaaatggatgcgagtatttaataaatgcgaagtctgttgacgaaatg
tcactttggatacaaaatataagaggaaatacaattgacacaagtataaccaatgaagat
tctagaaaaaggctgtcaatgatgaatagtccacagatctcttcaattcctaatcaacaa
gacgaagttcaaaagaaagacaaggaaaaaaagaggagtagcacttcattgtttaaaata
agaaaagctggaaaaccgtga
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integrated database retrieval system
