Hydra vulgaris (swiftwater hydra): 100213404
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Entry
100213404 CDS
T01080
Symbol
LOC100213404
Name
(RefSeq) autophagy-related protein 2 homolog B isoform X1
KO
K17906
autophagy-related protein 2
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg04136
Autophagy - other
hmg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100213404 (LOC100213404)
04136 Autophagy - other
100213404 (LOC100213404)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hmg04131
]
100213404 (LOC100213404)
03029 Mitochondrial biogenesis [BR:
hmg03029
]
100213404 (LOC100213404)
Membrane trafficking [BR:
hmg04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
100213404 (LOC100213404)
Mitochondrial biogenesis [BR:
hmg03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
100213404 (LOC100213404)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG2_CAD
Motif
Other DBs
NCBI-GeneID:
100213404
NCBI-ProteinID:
XP_047132306
LinkDB
All DBs
Position
09:16097935..16185894
Genome browser
AA seq
2002 aa
AA seq
DB search
MPWYFPWSESIKKRACRYLLQHYLGDFLKEKLDLDQLTVDLYNGKGTVTNILLDVWALNE
MLSNAGVALELVDGFISSISVSVPWKALLNDSCELEIHGLNLTFVQKQKMTRGNLFDSTY
SWSSMSMTTSIQLAQECLRQESNANSNVDTGQFEGLEAFAQTIESVLARVRLTFIDTKIR
FENVPVDASTGIGIELNIDRIDYWDLSHEEVAQDTSRQHSVYEPVAVAIKSFQIAGLVMI
MDEFPKHCRTRLREALTEEEKIQQESFLRGGSNSNPDLLPRVRFLSSCGKQTVKMKFKQN
DALPGPKVDIEYSLAALNVFLSPRQLHLLVNALSRMPETLDTSRSDLYQDHNTRRNKMRT
MKSADYLKVEESLQHQVGSMDFSLKNKVEQFKPSINLSSLSHNSTLSEEEFFSMTEYPLP
ALGQPSLIDPLKQSPFYNRFDSTSSRLSNVSLGGFSSSSKGTLTEQASSLFRATSGSSSS
PSPKCSGFHSSSNVGLAGISLLDDSVDVTHIKLRSNNIIFILLHQDPLTYPQHGGSNSLT
EMVDKFFSQVQQYSMQSLFGLNAEQIRESLLTICCSDHLRFLASAVYSDSEYKTVIGSTS
SSTNIVIGKIAVDENLYGNDNKNNRFVKPYSQSKILHFKYQEDSPLYSGPPLYSGSLLGN
QSPCFKLKINSVVKANTLGVQSRNSFPPKFSIEVDASELNIEIDLSMRDRIISLISPAPL
YKMNNASHDNAPFMYASLATGHSANQQTAFRQAMDDSPVITDKKTDITIRCPFLTAVIRI
PIPDLQSNNDIDKRTWWRKTVHKESLQVQIYKAEFKTSISSMLSTLSYELFFKSCKGLFD
SGEDLYHLFDIDCNSEEGETGSMTVDVPRILVNLSSSVLQSVFEETEQGSKSSSPDSFED
HYPWMKSEPSPFSSQPNMYENIEMVTPASKKEMNAFQEFATKNSKFTVNCYFPLLSANLH
NHEIFELIYNRLFGDLIMWQPLAPTQEEFYSKMGNPYEGVHINLASHIGQLNTGGDKFFM
CRSAIRDIYDSNSIDASFISAEYNDSPLQSLKCHQQTNLCFSIHIDSGKIAFFPPLKSDV
DSSLIGYGHTVLNIQDGHLFLASGYKGQPNMDYMQIYADGINLYHNPTVCSTLDTSVIED
AVATSGLTLVMNPSESHVRAKCKEQSYEPMLLLALKCTTDTNLKKKENIVSLSFQSGTLN
YCILPSSQSWFTQIMDFLDVRDFAIQGYNPPLVITLFHLNLKSCAVDYKPLYIPLQTLFI
FESFSLSSNVVPGSTASLLRFVMEDTSFYICNKGIDSETNEYVLLMDMGTFELSLKLTKG
TDKRLPIVDLAMSNNMLNIRTCSDSCLELMKFIKYVASGGDLQKDDDVIKNNDCGPVEDL
DMPSPSPSPSDTSQINSLLADAIRDATLADAMRDDTMIDAHKLKIDCLSEGTLLDTRIDE
STDDDGDEPQNFDEYCFLENEAAFQTFDDHEPILNRLTEKVVLVTENFFKVPFGSFNLLG
SPDDYPPPVYRYTVREMSIIWQMYGGSDFKVPSLKLSDKSKGGSAKSKETNQPDKSKTNR
VKGGVGRDLDTLMEIQMNKVRFQHEIYPDDTQQIYRDVLVIYDLEIRDRLFSSQINKFLY
RFSSESLPKQSSANMITVKFLVTKPEDNARSEEASLRVSLQPLRLNIDQDALFFLKNFFA
EVSGSKPLKSGSEFSNHLSSPPRESFLSSLDSTVPVYSQNFLNNAEKSEKPALFIKSFIF
SPEVPIRFDYHGKHVDIEQGTLAGIIIGLSQLNCSEIRLKRLCSRSGLLGPDKLINYMVT
EWMNDIKQNQLGSILGGVGPTYSFLQLFQGIKDLFWMPVQQYRQDGRIVRGLQRGAHSFS
TSTAMAVLELSNRLVSTIQSVAELTFDMVSPGPSHTSSLQLKNSSQMVQPAELREGMANA
YMVLSEGLSQTASNLVRVATDEHDKKGMSGAVGGVLRQIPPTLVKPLILSAEATSNVLGG
AMNQLAPDKHREALEKWRQDYY
NT seq
6009 nt
NT seq
+upstream
nt +downstream
nt
atgccctggtattttccatggtccgaatcaataaaaaagagagcatgtcgttatctattg
cagcattatttaggggatttcctgaaagaaaagttggacttagatcaattaactgttgat
ttatataatggtaaaggaactgtcactaacatactcctagatgtttgggctttgaatgaa
atgctctctaatgctggtgtagcattggaacttgttgatggttttatttctagcatttca
gtttcagtgccatggaaagcattattgaatgatagttgcgagctagaaatacatggctta
aatcttacatttgttcaaaagcaaaagatgactagaggtaacctttttgacagcacatat
tcttggagttcaatgagtatgacaacaagtatacaactagctcaagaatgtttaagacag
gagtcaaatgcaaacagcaatgttgatacaggacaatttgaaggacttgaagcattcgct
caaactatagaatcagtacttgctcgtgttcggttgacatttattgataccaaaattcga
tttgaaaatgtacctgtagatgcatcaacaggtattggaatagaattgaacattgatcgt
atcgattattgggacttgtctcacgaagaagttgcacaagatacctcccgacaacatagt
gtttatgaacctgttgcagtagctattaaaagttttcaaattgctggtcttgtcatgata
atggatgaatttccaaagcactgtagaactaggctgcgcgaagcgctcactgaagaagag
aaaattcagcaagaaagttttttgagaggaggttctaacagtaatccagatcttcttcct
agagtcagatttttatcatcttgtggtaaacagactgtaaaaatgaagttcaaacaaaat
gatgcacttccaggacccaaggtagatattgaatattccttagctgccttgaatgtgttt
ctttcaccaagacaacttcatttgttagtaaacgctctttcgaggatgccagaaactctt
gatacatcacgttcagatctttatcaagatcacaatacacggcgaaataaaatgcgaaca
atgaaatcagcagactacttgaaagttgaagagtcattgcaacatcaggttggaagtatg
gatttcagcctgaagaataaagtagagcaatttaaaccatcaataaatctgagttccttg
tctcataactctacacttagtgaggaagagttcttttcaatgacagagtaccctttacca
gcgcttggacaaccaagtctcattgacccattaaagcaaagcccattttataacagattt
gatagtacatcttctcgtttaagtaatgtgagcttgggcggttttagtagctcatcaaaa
ggaactctgacagagcaagccagttctttatttcgtgctacaagtggcagttcttcttca
ccctcaccaaaatgttctggtttccattcatcttcaaatgttgggctagctggaatcagt
ttattagatgattctgttgatgtcacgcacattaaacttagatctaataatatcatattt
atccttctacaccaagatcctctcacatatccacaacatggtggaagtaatagtttaaca
gaaatggttgacaaatttttctctcaagtccagcaatattctatgcagagcctatttggt
ttaaatgctgaacaaattcgtgaaagtttattaactatctgttgttcagatcatttaagg
tttttggcatctgcagtttactcagactctgagtataaaacagttataggttccacttcc
tcttcaacaaacatagttattggcaaaattgcagttgatgaaaatctttatggaaatgat
aataaaaataaccgttttgtaaagccatacagtcagagtaaaattttgcattttaaatac
caagaagattcccccctttattctggtccccccttatactctggttctctccttggaaat
cagtctccatgctttaagttgaaaataaacagtgtggtgaaagcaaatacattgggagtc
cagtctcgtaactcgtttcctccaaagtttagcattgaagttgatgctagtgaattaaac
atagaaattgatttaagcatgagagacaggataatttcgttaatatctccagcaccacta
tataaaatgaacaatgcttcacatgacaatgctccattcatgtatgcttctttagcaact
ggacattcagctaatcagcaaactgcttttcgacaagcaatggatgatagtcctgttata
acagataagaagacagatataactattagatgtccctttctaacagctgtaataagaatt
cctatacctgatttgcagtcaaacaatgatattgataaaagaacatggtggagaaagaca
gtgcacaaagaaagtctacaagttcaaatctataaggctgagtttaaaacatcaatatcc
tctatgctatcaactttatcttatgaactcttttttaagtcatgcaaaggtttatttgac
tctggtgaggatttatatcatctttttgatattgattgcaactcagaagaaggagagact
ggatcaatgactgttgatgttccaagaattttagttaatttgtcatcatctgttttacaa
tctgtatttgaggaaactgaacaaggatcaaaaagttcttcacctgattcttttgaagat
cattatccttggatgaaatctgaaccatcacctttctccagtcagccgaatatgtacgaa
aacattgagatggtgacacctgcttctaaaaaggaaatgaatgcttttcaagaatttgca
actaaaaactcaaagtttactgtgaattgctattttccattgttgtctgctaaccttcat
aatcatgaaatctttgaactgatttacaacaggttgtttggtgacctgataatgtggcaa
ccgctggcaccaacccaagaagagttttattctaaaatgggtaatccatatgaaggtgta
cacataaaccttgcaagtcatattgggcaattgaatactggtggtgataagttttttatg
tgccgctcagccattagagatatttatgattctaattctattgatgcaagctttatatct
gcagagtacaatgattctcctctacaatcacttaagtgtcatcaacaaactaatctttgt
ttctccattcatattgattctggaaaaattgctttttttccacccttaaaaagtgatgta
gattcatctttgattggttatggacacacagtgttaaatatacaagatggacatcttttt
ttagcttcaggctataaaggtcaacctaatatggattacatgcaaatttatgctgatggt
ataaacttgtatcataacccaactgtttgctcaacacttgatacatcagttatcgaagat
gctgttgcaactagtggcttaacattagttatgaatccttcagaaagtcatgttcgtgct
aaatgtaaagaacaaagttatgagccaatgttgttattagctttaaaatgtaccactgat
acaaatttgaaaaaaaaggaaaatattgtttctttgtcgtttcaaagtggtacactgaac
tattgtatattgccttcatctcaaagctggtttactcagataatggatttcttggatgtg
agagattttgccatacaaggatacaatccccctcttgtcattactttgttccatttaaat
ttaaaaagttgtgctgttgactacaaacctttgtatattcccttgcaaacattattcata
tttgagtccttcagtttatcaagtaatgttgtacctggatcaactgcgtctttattgagg
tttgttatggaagatacatctttttatatttgcaataaaggaatagattctgaaacaaat
gaatatgttctccttatggatatggggacatttgagttatcactaaagctcaccaaagga
actgacaaacgactacctattgttgatcttgcaatgtcaaataacatgcttaatattcgc
acatgctctgattcctgtttggaattaatgaagtttattaaatatgttgcatcaggcggt
gatctacaaaaagatgatgatgttattaagaacaatgattgtggcccagtagaggattta
gatatgccttctccgtcaccttctccttctgatacatcgcaaattaattctttattggca
gatgcaataagagatgctacattagcggatgcaatgagagatgatactatgattgatgcg
cataagctcaaaattgattgtttatctgaaggaacgttacttgatactcgcatagatgaa
tctactgatgatgatggagatgaaccacagaactttgatgaatattgcttcttggaaaat
gaagctgctttccagacatttgatgatcatgaaccaattttgaatcgactaactgaaaaa
gtggttttagttacagaaaatttctttaaagtaccatttggtagctttaatcttcttgga
tcaccagatgattaccctccaccagtttatagatacacagtgagagaaatgtcaattatt
tggcaaatgtatggaggaagcgacttcaaagtaccgagtttgaaattaagtgataaaagt
aaaggaggaagtgcaaaatccaaagaaaccaaccaaccagataaaagtaaaacgaacaga
gtaaaaggtggtgttggaagagatcttgatactttgatggaaatccaaatgaacaaggtt
cgatttcaacatgaaatctaccctgatgacacacagcagatttatcgtgatgttcttgta
atctatgatcttgaaatacgagatcggctgttttcttctcaaatcaataaattcctgtac
aggttttcatctgaaagtttgccaaaacaaagcagcgctaatatgattacagttaagttt
cttgttactaagccagaagataatgcccgtagtgaagaagcatcattaagagtttctctt
caaccacttcgattaaatattgatcaagatgctttattttttttaaaaaacttttttgct
gaagtttctggcagtaaaccattaaaatcaggatctgaattttctaatcatctatcttct
ccgcctcgggagtcgttcctttcttctttagattcaacagtgccagtttattcacagaac
tttttaaacaatgcagaaaaatctgaaaaaccagctttgtttataaaatcatttattttt
tccccagaagttcccattagatttgattatcatggaaaacatgtagatattgaacagggt
actttggctggtatcatcatcggcctttcacaactaaattgctcagaaattcgtttaaaa
cgattatgctctcgaagtggtttacttggaccagataaacttataaattatatggtaaca
gaatggatgaatgatatcaaacaaaatcaactgggaagtattttaggcggagttggccca
acctatagttttcttcagttgtttcaaggaatcaaggatttattttggatgccagttcaa
caataccgacaagatggaagaattgtgcgtggtcttcaaagaggtgctcattcttttagc
acttccacagcaatggcagttttggagttatctaacagattagttagcacaattcaaagt
gttgcagagttaacctttgacatggtaagtccaggaccatctcatacttctagtttacag
ctaaagaatagcagtcaaatggttcaaccagctgaattgcgagaaggaatggctaatgct
tatatggttttatcagaaggattatcacagactgcttcaaatttagttcgtgtggccact
gatgagcatgataagaaaggcatgtcaggtgctgttggtggggttttacgacaaattcct
ccaacattggtcaaacctctgatactatcagctgaagcaacttcaaatgttcttggaggt
gctatgaatcaattagcgcctgataaacacagagaagctcttgagaagtggagacaagat
tactactaa
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