Hydra vulgaris (swiftwater hydra): 100213709
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Entry
100213709 CDS
T01080
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100213709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hmg03032
]
100213709
Enzymes [BR:
hmg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
100213709
DNA replication proteins [BR:
hmg03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
100213709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-DNA_Pol
DNA_pol_alpha_N
Eap1
Motif
Other DBs
NCBI-GeneID:
100213709
NCBI-ProteinID:
XP_047140645
UniProt:
A0A8B7DMT7
LinkDB
All DBs
Position
9:24633517..24722347
Genome browser
AA seq
1445 aa
AA seq
DB search
MSVEHRRESSGRRSGRNVGKESSAKKLALEKLKKYHETGEKIEYEVGKEEDVYELVDEDK
YAQLVQDRQEEEWIVDDDGGGYVDDGREIFDDDPNEIPIEKKKKTDKESKGSKSDVKSSK
ITNLFKSANCITKRKKETNVTVEGDSVLEDILNSITSATTTSGSKYHNRSSLQNKTQKHS
HSTRNIEKTQKQFTSQPSPHVEEKKIILKKTTHVRDFTHIVKKENIDSGASDLHKDINQN
KDVDTDYNQIDCETFSQDTEKYASQDTDNFIEKVKDQSLIEDGFNDEFSDEMVTLIEETD
LTPKTSIKQSTKFRSLVAYEDVFDKKEEPLPDTSSISSSLPTSNINGDDVLRFFWLDAYE
DRFSQPGTVYLFGKVWIEASKCYVSCCVAVKNIDRQLYILPRKTRHQNGKDINIPVDFKD
VYEELHQGAIAKNKIMEFKCRKVLKKYAFDKVEVPYEAEYLELLYSADQPQLQSDLKGET
FSHIFGSNTTSLELLFLNQKLQGPSWIDVKFPQIPKQAVSWCKVEAFVDRPTFITVVEES
IPPPPLIVLSLSMLATTSKTNAHEIISICGLVNPEVFFDRGVPDQCFKNSFCFVTKPSDQ
LLPYDFQSTIQKNNTKIQVCASERSMLGLLLAKILAIDPDVIVGHDIQDFVFDVLLHRLD
FNKIPHWSKIGRLKRANMPKHLHGKQGFNVTDKVIACGRLVCDIKISAKELMRCKSYNLT
EICSFVLKKQRNDLLPEEILKNLQKTENLLNMLNYNRADAMYQLQIMYELNILPLAYQIT
GICGNVMSRTLLGGRSERNEYLLLHAFFKKNYILPDKSYGAKKDFKLNEKDKDVKQTGVS
KKPQKSRKKPTYAGGLVLEPKKGFYDKYILLLDFNSLYPSIIQEYNICFTTISRETFSNG
AEEEEELPSIPSPDLETGVLPTELKRLVERRKQVKQLLKTAPQQSDLYLQYDIRQKALKL
TANSMYGCLGFSESRFYAKPLAALVTMKGREILMKTKDLAQALGLEVIYGDTDSIMINTN
SNDLNEVRKIGSKVKSEVNKLYRTLEIDIDGIFKSMLLLKKKKYAAVVVEIKDDGKLVEH
TEMKGLDIVRRDWCGLAKESGSYVINEILSSKPRDVILENIHEFLRDVAKKLSNGEVEME
KFEINKCLTKNPDEYPDKKSLPHVTVALRLMAQGRRVAVGDTITYIICDDNSKLPATQRA
YHPEECLKNSNLKIDYHYYLSNQVHPVVSRLCDPIEGTDSSFIAECLGLDPTGYKSSSVQ
QDEQGLLTVLMTDEERFKDIEKFFVRCNIESCSLFKQEVEFKGSFDNKVDPFVCSSCNQP
YHRNKLHNCLKLFIRNFINRYYSCWMSCDDRSCGYVSRHISVKSFMHAQICNQCGKRNIH
VDYSDTMLYNQLIYLSRLFDVNKTSEVTIKRIRKQNDLWQTLYHEVEKTLKLNAYSTVNI
GDLFK
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtagaacatagaagagaaagcagcggaagaagatcaggacgaaatgttgggaaa
gaatcttctgctaaaaaattagcattagaaaagttaaaaaaataccatgaaactggagaa
aagatagaatatgaggttggaaaagaagaagacgtgtatgaacttgtagacgaagataaa
tatgctcaacttgtgcaagacagacaggaagaagaatggattgtagatgatgatggagga
gggtatgttgatgatggtagagaaatatttgatgatgatccaaatgaaattcctattgaa
aaaaagaaaaaaactgataaagagagtaaaggatcaaaaagtgatgtaaaaagctcaaaa
attacaaatttgttcaagtctgcaaattgtatcacaaaaagaaaaaaggagacaaatgtt
acagtagaaggtgattcagttttggaagatattctcaatagtatcacttctgcaacaaca
acttctggtagcaaataccataatagatcttccttacaaaataaaacacaaaaacattct
cattcaactcgtaatattgaaaagacgcaaaagcagttcacatctcagccttcgcctcac
gttgaagaaaaaaagataattttgaaaaaaacaactcatgtgcgtgattttactcatata
gttaaaaaagaaaatattgattcaggtgcttcagatttacataaagatataaatcaaaat
aaagatgtggacacagattataatcaaatagattgtgaaacatttagtcaagatacagaa
aagtacgcttctcaagatacagataattttattgaaaaagttaaagatcaatctttaata
gaagatggttttaacgatgagttttctgatgaaatggtaaccctgattgaagaaactgat
ttaactccgaaaacatcaataaaacaatctacgaagtttcgatcattagtagcttatgaa
gatgtttttgataaaaaagaagagccattaccagatacctcttcaatttcttcatcatta
cctacttcaaatataaatggtgatgatgttttgagatttttttggttggatgcctatgaa
gatcggtttagtcaaccaggaacagtgtatttatttggaaaagtttggattgaagcctca
aaatgttacgtcagttgttgtgttgcagttaaaaatattgaccgccaattgtacattctt
ccacgtaaaacgcgtcatcagaatggcaaagatattaacattcctgtagacttcaaagat
gtttatgaggagcttcatcaaggtgctattgctaaaaacaaaatcatggagtttaaatgt
cggaaagttctgaaaaagtatgcttttgataaagttgaagtaccatatgaagcagagtat
ctggagctgttgtacagtgctgaccaaccacaactacaatcagatttaaaaggtgaaaca
ttcagtcatatatttggatcaaacacaacaagcttagaattgttatttctcaatcagaag
ttacaaggaccatcttggattgatgttaagtttccacagattccaaaacaagctgtcagt
tggtgtaaagttgaggcctttgttgataggccgactttcattacagttgttgaagaaagt
attccccctccacctttgattgtcttaagtttatccatgcttgctacaacttcaaaaact
aatgcacacgagataatatccatatgtggtcttgttaatccagaagtattttttgatcgt
ggtgttccagatcaatgttttaaaaatagtttttgctttgttacgaaaccttctgatcaa
ctgttaccttatgattttcaatcaactatacaaaaaaataacacaaaaattcaagtctgt
gcatctgagagatctatgttaggacttcttcttgcaaaaattcttgctattgatcctgat
gttatagtgggtcatgatatacaagattttgtttttgatgtgctgttacatagattagat
tttaataagattccacattggtcaaaaattggaaggttaaagagagccaatatgcctaaa
cacttacatggcaagcaaggttttaatgttacagataaagttatagcctgtgggcgacta
gtttgtgacataaagattagtgctaaagaactcatgcgatgtaaaagttataatttaaca
gaaatatgcagttttgttttaaaaaagcaacgcaacgatttattacctgaagaaatactt
aagaatcttcagaaaacagaaaatcttttaaatatgttgaattacaatcgagcagatgct
atgtaccaattgcagataatgtatgaactaaatattttgccacttgcttaccaaataact
ggtatttgtgggaatgtaatgtcacgaactttactaggaggtcgatcagaaagaaatgaa
tatttgcttctacatgcatttttcaaaaaaaactatattctccccgataaatcttatgga
gcaaaaaaagattttaagttaaatgaaaaagataaagatgtaaagcaaacaggagtttca
aagaaacctcaaaagagtcgcaaaaaacctacttatgctgggggtttagtgttagaaccg
aagaaaggtttttatgacaaatacatcttattacttgactttaatagtctttatccgtcc
attatacaagagtataatatttgctttactactatatcaagggaaacattcagtaatggc
gcagaggaggaagaagagttgccaagcataccatctccagatttagaaacaggtgtcttg
ccaactgaattaaaaagattagttgaacggagaaaacaggtgaaacagcttcttaaaaca
gcacctcaacagtcagatctttatttgcagtacgatattcgacaaaaggctttaaaatta
actgctaacagtatgtacggttgcctaggtttcagtgaatcaagattttatgcaaagcca
ttggctgctttggttactatgaaaggtcgtgagatcttaatgaaaacaaaagaccttgct
caagctcttgggctagaagttatatatggcgacacagattcaattatgattaatacaaat
tctaatgatctcaatgaggttcgaaaaataggatcaaaagtgaaaagtgaagttaataaa
ttatacagaacacttgaaatagatattgatggaatatttaaatcaatgcttcttctcaag
aaaaaaaagtatgctgcagttgtagttgaaattaaagatgatggaaaacttgttgagcac
actgaaatgaaaggtttagatattgtacgtcgcgattggtgtggtttagctaaagaatcg
ggaagttatgtcataaatgaaattttgtcttcaaagcctcgagatgttatacttgaaaat
atacatgagtttttaagagatgttgctaaaaagttatcaaatggtgaagtagaaatggaa
aaatttgaaattaataagtgtttgacaaaaaatccagatgaatatcctgacaaaaaatca
ctgccacatgtcacagttgctttaaggttaatggcacaaggacgtcgtgttgctgttgga
gatactattacttacataatttgtgatgacaattcaaaattacctgctacacagcgagct
taccacccagaagagtgtttaaaaaattcaaatttaaaaattgattatcattattatcta
tcaaatcaagttcatcctgttgtgtcacggttatgtgatcctattgaaggaactgactca
tctttcattgctgaatgtttgggactcgatccgacaggttataaatcatcttcagttcaa
caagatgaacaaggattgttaacagttctcatgacagatgaggaaaggttcaaagatatt
gagaagttttttgtgaggtgtaatattgagtcttgttctttgttcaaacaagaagtagag
tttaaaggatcttttgataataaggttgatccttttgtttgctcttcatgcaatcagcca
tatcatcgtaataaattgcacaactgtttaaagctttttatcagaaattttatcaataga
tactactcatgttggatgtcttgtgacgatcgctcgtgtggatatgtatctcgacacata
tcggtgaaaagctttatgcatgcgcaaatttgtaatcagtgtggcaaaagaaatattcat
gttgattatagcgacactatgttgtacaatcagctaatttacttaagcaggttattcgat
gttaacaaaacttctgaagtcacaataaagcgaattcgaaagcaaaatgatttatggcaa
acactttatcatgaggttgaaaaaacattaaaactcaatgcatattccactgtaaatatt
ggggacctttttaaatga
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