Hydra vulgaris (swiftwater hydra): 100213734
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Entry
100213734 CDS
T01080
Name
(RefSeq) WD repeat-containing protein 1-A isoform X1
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hmg04990
]
100213734
Domain-containing proteins not elsewhere classified [BR:
hmg04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
100213734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
EIF3I
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
eIF2A
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
RMC1_N
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
NBCH_WD40
WDR90_beta-prop_4th
PEP5_VPS11_N
Beta-prop_RIG_1st
VID27
WD40_RFWD3
Beta-prop_ELP1_1st
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
100213734
NCBI-ProteinID:
XP_047128179
UniProt:
A0A8B6XKN2
LinkDB
All DBs
Position
3:11909077..11942938
Genome browser
AA seq
611 aa
AA seq
DB search
MSEDGSYTLLNIFAGTPRTTRGRPIHLSADPKGKNFLYCQGNSIIIRDVENPSNSDVYTQ
HAKDTTSAAYSPSGFYICSADVTGKVRIWDTVNKDHILKYEYPALGGPIKDIAWTEDSKR
IGVCGEGREKAAHVFMWDTGTSVGELTGPLKACNNISIKQTRPYRLVVSSEDYSTCYYEG
PPFKLKSQFREHTSFANCVRFSPDGNKFVSAGSDGRCFVHDGKTGDLIGEMCSAQQKVHN
GGIYGISWSPDSKMLMTCSADKTVKIWNMDDLSSKEVVSFEMGKTIDDMQVGCLWVGDNI
ISVSLSGNINYLDMKDPSKPKRVVKGHNKAIVASCLNEDRTLLFTASFEGLTCYWDLVTG
VAEYVQGEAHKNQVMHMECKNDTIVTCGMDDTVRFITVSEKKYSSSVVALSSQPRGCAIG
NLGLSIVVCVNSIIVIQDGKVAQKYSSLSFDPTCVAISCDLAKVAVGTEESKVVIYDIIG
SELKQHSDFPTNGNVTCIQFSPDNKFLAISTGKKQVKVVLTSDFKTEKGNWASHSGKVNS
IDWTPNSHFLASAGIDGAVYVWDVVKGDASASLRGAHSQSVDVTSVRWSDNNTLLTCGRQ
DCCVRKWNIKH
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagatggttcatataccctattaaatatttttgctggtacgccaagaactaca
cgtggtcgacctatccatctttctgctgatccaaaagggaaaaattttttgtattgtcaa
gggaatagtattataattcgtgatgtagaaaatcctagtaattcagatgtgtacacccag
catgctaaagacactacaagtgctgcttattctccaagtggattttatatatgctctgca
gatgttactggcaaagtgagaatttgggacacagtaaacaaagaccatatccttaagtat
gaataccccgctcttggtggtccaattaaagatattgcttggactgaagacagtaaaaga
attggtgtttgtggtgaaggaagagaaaaagcagcccatgttttcatgtgggatactggt
acatcagttggtgagttaacagggcccttgaaagcttgcaataatattagcattaaacaa
acacgaccatacagacttgttgtatcgtctgaagattattctacatgctattatgaaggc
cctccttttaaattgaagtcgcaatttcgagagcacacgagttttgcaaattgcgttcgt
ttttcaccagatggtaataagtttgttagcgctggttcagatggaaggtgctttgtgcat
gatgggaaaacaggtgatctcataggagaaatgtgtagtgctcagcaaaaagtacacaat
ggaggaatttatgggatctcttggagccctgatagtaaaatgttgatgacatgttcagct
gataaaactgtgaaaatatggaacatggatgatctttcaagtaaagaagttgtctcattt
gaaatgggaaaaactattgatgacatgcaggttggatgtttgtgggttggagacaatata
atcagtgtttcacttagtggaaatattaattatcttgatatgaaagacccttctaagccc
aagagagttgtaaagggtcacaacaaagctattgtggcatcttgtttaaatgaagataga
actttattgtttactgcaagctttgaaggactaacctgttattgggatttagttacaggt
gttgcagagtatgtccagggtgaggctcacaaaaatcaagtgatgcacatggagtgtaaa
aatgatacaattgtcacatgtggtatggatgacactgttcgttttataacagtttctgaa
aagaaatacagcagtagcgttgttgctttaagttctcaaccacgaggatgtgcaattgga
aatcttggattgagtattgtagtttgtgtaaactctatcattgtcattcaagatggaaaa
gttgctcaaaaatattcgtcactttcttttgatcctacttgtgtagcaataagctgcgac
cttgctaaagtagcagttggtactgaggagtcaaaagttgttatatacgacataatagga
agtgagttaaaacaacattctgattttccaactaatggcaatgtaacttgcattcaattt
tctcctgacaataagtttcttgcgataagcactggaaagaagcaagtcaaagttgtttta
acatctgattttaagaccgagaagggtaactgggcttcacactctggaaaagtcaattct
attgattggactccgaactcacatttcttggcatcagcgggtattgatggagcagtttat
gtttgggatgttgttaaaggtgatgcgagtgcttctttaagaggtgcccactctcagtcc
gtggatgtcacctctgttcgatggtcggataataatacactattaacatgtggacgtcaa
gattgctgcgttcgtaaatggaatataaaacattag
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