Hydra vulgaris (swiftwater hydra): 100213921
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Entry
100213921 CDS
T01080
Symbol
LOC100213921
Name
(RefSeq) far upstream element-binding protein 3 isoform X1
KO
K13210
far upstream element-binding protein
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmg03019
]
100213921 (LOC100213921)
03041 Spliceosome [BR:
hmg03041
]
100213921 (LOC100213921)
Messenger RNA biogenesis [BR:
hmg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
100213921 (LOC100213921)
Spliceosome [BR:
hmg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100213921 (LOC100213921)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_NusA_2nd
KH_KHD4_2nd
FUBP_C
KH_DEAH11
DUF8449
Motif
Other DBs
NCBI-GeneID:
100213921
NCBI-ProteinID:
XP_047134241
LinkDB
All DBs
Position
02:complement(14111221..14145326)
Genome browser
AA seq
705 aa
AA seq
DB search
MAAQTTDQQNALKDAMARAKQIAAKLQQQQSSGTPLDNYLEYDDSRKRSYQDFAPSEPFP
KRMTIEGAVDHSDPKIIAQQVANSLVQRAGIGSMLVEDVSIPNKLVGLVIGRGGEMINRL
QSDSGAKIQVAPDPPPNMMDIDRQITITGSSEAVSKAKQLIEQIRNEGKVPERLMLAANL
PGEFSIEMKIAAGKVGLVIGKGGETIKSLQERAGCKMILFQDGEYAQAAEKPLKISGEQS
KVLYGKQLVQDLIVSKEIEADKTSCYIFNQSPYTSDITSMVPNPGDPDQVGYEEIQVPRE
AVGFIIGSKGANINNIQQMTGCRIQFKNEMEGEFKTATLQGNPQAIVMGREKLLEILQAY
QDRVNGTGGTFQWRSPRPIGMTTARPGWVTPGVPGHFATARPGWPGHQVGPRAWVPRVPG
QYIPRAAGGLGGSSILQPGHKHMEIDVPANKCGLIIGKGGETLKYMHTETGINIEIKRNV
PDSSPFRTFNLRGTDEQISKAETFIREKVGDQSLTAKPASETDDQNANQGSRWGPPQHNS
QWATQATQQWDGQAVWTQPQQDQWGQQGAWNQQQPVTWNQPTANGVWAPQQQWQQPNAQW
PAQQQPWGQQQTPGTEVTNVEVPATDTTAAQTGSQPDYSAAWAAYYQQQNQYYQQYMQQQ
TPGTPANTNPAGTANPAGNQAAAMADYQAKMAEYYKSFGQQPPTQ
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcaaactactgatcagcagaatgcccttaaagacgctatggctcgtgccaaa
cagattgctgcaaagctgcaacaacaacaatcatctggaactcctcttgataactatttg
gagtatgatgactctcgaaaaagaagctatcaagattttgcaccatctgagccttttcca
aagcgaatgacaatagaaggagctgtagaccactctgaccctaaaattatagcacagcaa
gttgcaaacagtcttgtacaaagagctggtataggctccatgttagttgaagatgtttct
attccaaataaactcgttggtttagtcatcggtcgcggaggggaaatgataaatagatta
caatctgattctggcgctaaaatacaagttgctccagatccaccaccaaacatgatggat
attgatcgtcaaataactataactggttccagcgaagctgtgagtaaagctaaacagcta
atcgaacaaataagaaatgagggaaaagtaccagaaagattgatgcttgctgcaaatttg
cctggagagttttcaattgaaatgaaaattgctgctggtaaagtgggacttgtaatcgga
aaaggtggtgaaacaataaagtctcttcaggaaagagcaggctgtaaaatgattctcttt
caagatggtgaatatgcgcaggctgcagaaaaaccactcaagataagcggagaacaatct
aaagttttatatggcaaacaattggttcaagatttaatcgtatctaaagaaattgaggct
gacaaaacttcgtgctacatatttaatcaatcaccttatacatcagacattacgtcaatg
gtgcctaatccaggagatcctgatcaagttggctacgaggagatacaagtacctcgtgaa
gctgttggatttataattggatcaaaaggagctaatattaataatattcaacaaatgact
ggttgtagaattcaatttaaaaatgaaatggaaggtgaattcaaaacagctacactacaa
ggcaatcctcaagctatagttatgggtagagaaaagttgcttgaaatactgcaagcttat
caagatagagtcaatggtacaggaggaacgtttcagtggcgcagcccaagaccaatagga
atgaccactgcaagacctggttgggttacacctggtgtacccggacattttgctactgct
agaccgggttggcctggccatcaagttgggccaagagcttgggttccaagagttccgggg
caatatataccaagagcagcaggaggtttaggaggtagcagtattctgcaacctggtcat
aaacatatggaaattgatgttccggcaaataaatgtggtttaattattggaaaaggtgga
gaaacacttaaatatatgcacacagaaactggaataaacatagaaataaaaagaaatgtt
ccggattcatccccttttcgtacatttaatttaagaggaactgatgaacaaatctctaaa
gctgaaacgtttattagagaaaaagttggagatcagtctcttacagctaaacctgcttct
gaaactgatgatcaaaatgccaatcaaggaagcaggtggggtcctccacaacacaatagc
caatgggcaacacaagccactcagcaatgggacggtcaagctgtttggactcaacctcag
caagaccaatggggccagcagggggcatggaatcaacagcaacctgtaacttggaaccaa
ccaacagctaatggtgtgtgggctccacagcaacaatggcaacaacctaatgctcagtgg
ccagctcaacaacaaccatggggacaacaacaaacacctggtacagaagttacaaatgta
gaagtccctgcaactgacacaactgctgcacaaacaggttctcagccagactatagtgca
gcatgggcggcctactatcagcaacaaaatcaatactatcagcagtatatgcaacaacaa
acacctggtactcctgctaatacaaacccagctggaacagctaatccagctggaaatcaa
gctgctgctatggcagattaccaagctaagatggcagaatactataaatcctttggtcaa
caaccgcctactcaataa
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