Hydra vulgaris (swiftwater hydra): 100213959
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Entry
100213959 CDS
T01080
Name
(RefSeq) sodium channel and clathrin linker 1 isoform X1
KO
K25400
sodium channel and clathrin linker 1
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hmg03037
]
100213959
Cilium and associated proteins [BR:
hmg03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100213959
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCCAP
Motif
Other DBs
NCBI-GeneID:
100213959
NCBI-ProteinID:
XP_047127034
LinkDB
All DBs
Position
2:73895259..74022538
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AA seq
707 aa
AA seq
DB search
METTERNKELLFLQDQVTRLSSVLKSYQTKYPPISDVKDEVWIYDSSMLSPLLMEYDQLI
KSLKEDIEYYKIELHKLQKQAQDVVQENMKLHAELRSKVELHAGSLEDNSLSLLQLEIKL
KTAFEEKNIISKQLDNANKELMKIKEENRIKGNDIANLLSENVMLKDDIAQARAFASDLQ
NANLRFKAEQEKVLNTIEIYDSQIESLKSQNRKLLCENKTLKALNSELQIHAEQQKEHLK
HSVKSQQYNLSERSAEGTIRKLQNEILGLESRVVLYSKELDKLRYENSDLEEKLATLQKK
INMHEENEQEAVMRVRDSVQLVENALIEKEKAVVSEQQKVQEIIRLQEALKSLISHAEEE
KRKEVSRIKAQNDKEIRHLMEDLHYQENECAEKQALLEKSYREKLALENEIEKIYQEGPI
EITKAGQTLDELHVRLARAEMARDDAYLQNENLQANFKRLQTRWENEKNVLTKSVNDSNK
KLACMKNDLDEMANSRLLLLEELNTLKKKVLVNRENDVSQELSNAAKVALLEQKIEMKEK
NFQSLLRASEESGREAANELRDMLRVQQKSASKWREESRALCQKYELQVAHLRQVNDDLT
RRNQDLERMYNESLQKASELEKSFYLQQLTIDKMQRLHSTCEERIETSNNQVSSYLVREK
QLVDSQKALTREIERLRLDSIQSCRNQTQPIDLQWDNYISEINKEMT
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgacagaaagaaataaagaattattatttttgcaagatcaagtaactcgactg
tcatctgttttgaagtcataccaaacaaagtatcctccgatttctgatgtaaaggatgaa
gtttggatatacgattccagtatgctatctcctcttttaatggaatatgaccagctaatt
aaaagtttaaaagaagatattgaatactataagatcgaattacataaactacaaaagcaa
gcacaagatgtggttcaggaaaatatgaaattacatgctgagcttcgttcaaaggttgag
ttgcatgctggtagtttagaggataattcattgagtttgcttcagttggagataaagtta
aaaactgcctttgaggaaaagaatattattagcaaacaacttgacaatgctaacaaagaa
cttatgaaaataaaggaggaaaacaggataaaaggaaatgatattgcaaacttactttct
gaaaatgtcatgttaaaggatgacatagctcaagctagagcatttgcatctgatctacaa
aatgcaaacctgcggtttaaagcagagcaagaaaaagttttgaatacaattgaaatatat
gattcacagattgaaagcttaaaatcacaaaaccgaaaattgttatgtgaaaacaaaaca
ttaaaggctttaaatagtgaactccaaatccatgcagagcaacaaaaagagcatcttaaa
catagtgtaaaatcgcagcaatataatttatcagaaagatctgctgaaggaacaattcgt
aaattgcagaatgaaatattaggactggaaagtcgtgtggttttgtactcaaaagagtta
gacaaactgcgttatgaaaacagtgatttggaagagaaactagcaactctacaaaaaaaa
attaatatgcatgaagaaaatgagcaggaggctgtgatgagagttcgtgatagtgttcag
ttagttgaaaatgctcttatagaaaaagaaaaggctgttgtcagtgaacaacagaaagtg
caagaaataattagacttcaagaagctttgaaaagcttgattagtcatgctgaagaagaa
aaaaggaaggaggtatcgcgcattaaagctcaaaatgacaaagaaatccgtcatttaatg
gaagatcttcattaccaagagaatgagtgtgctgagaagcaagcattgcttgaaaagtca
tacagagagaagctggcattagaaaatgaaatagaaaagatttatcaagaaggcccgatt
gaaattacgaaagctggacagacattggatgagcttcatgtaagactagcgcgggctgaa
atggctcgtgacgatgcttacttgcaaaacgaaaatcttcaggctaattttaaaagatta
caaacaaggtgggaaaacgaaaaaaatgttctcacaaaaagtgtcaatgattccaataag
aagttagcatgtatgaaaaatgaccttgatgaaatggcaaactcgaggttgttattactg
gaagagctaaacactttgaaaaaaaaggttttggtaaatcgagaaaacgatgtttctcag
gagttgtcaaatgcagcaaaggtagcattgttggagcaaaaaatcgagatgaaagaaaaa
aactttcaatctcttcttcgtgcttcagaggagtctggtagggaagctgcaaatgagtta
cgtgatatgctaagagtgcagcagaaatctgcgtctaaatggagagaagaatcacgtgct
ctatgtcaaaagtatgaattacaagtcgcccacctacgacaagtaaatgatgatctgaca
cgccgtaatcaagatcttgagcgcatgtacaacgagagtttgcaaaaagcaagcgagctt
gagaagtctttttatttgcagcaattgacaatagataaaatgcaacgtttacactctacg
tgtgaagaaagaattgaaacttcaaacaatcaagtttcatcgtatttagttcgcgaaaaa
caattagttgattcacaaaaagcattaactcgtgaaatagaaagactcagacttgattca
attcaatcgtgccgaaatcagacacagcccatagatttacaatgggataactacatcagc
gaaatcaataaagaaatgacgtga
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