Hydra vulgaris (swiftwater hydra): 100213970
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Entry
100213970 CDS
T01080
Symbol
copb
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hmg04131
]
100213970 (copb)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hmg04147
]
100213970 (copb)
Membrane trafficking [BR:
hmg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
100213970 (copb)
Exosome [BR:
hmg04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
100213970 (copb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT
Cnd1
HEAT_2
HEAT_EZ
TOR1L1_N
Coatomer_g_Cpla
MMS19_N
Motif
Other DBs
NCBI-GeneID:
100213970
NCBI-ProteinID:
XP_047123999
LinkDB
All DBs
Position
15:complement(2958060..2992443)
Genome browser
AA seq
957 aa
AA seq
DB search
MTSIAELPCYTLINYPIENEPVTEAKLKEDLERGDIPAKTTALKKVMYQLLNGEKMPSIL
MTIIRFVLPLQDHTIKKLLLIFWEIVPKTSSDGKLLQEMILVCDAYRKDLEHPNEFIRGS
TLRFLCKLKESELIEPLMPAIRACLEHRHSYVRRNAVFAIYTIYRNFDFLIPDAPELVYE
FLEKEQDASCKRNAFMMLIHVNQEKALDYLSTCIEQVHSFNEILQLVIVELIYKVCIANP
QERSRFIKCIYNLLNSSSNAVRYEAAGTLVTLSSAPTAVKAAASNYIELILKESDNNVKL
IVLDKLIKLKENPVHERVLQELVMDILRVLASPDLEVRKKTLDLVLELVTLRNINEVVMI
LKKEVTKTHTESEKGDLIGNYRQILVRTLHSCCIKYPDVAPTVVPMLTEFLGDENEQAAL
EVLLFIREAVLKFVSLKAVILEKLLENFRTIKNVKIHRHALWILGEYCQQSNDILSVMNE
IKDGLGELPLVDDELRKMAGTKGEETDEDKKSVPSQRMMVTADGTYATQSAFVTKSSTVE
ADTRPPLRNYLMKGDFFIGSVIGSTLTKLALKFTDVSQDIVSKNKFVAETMFVIASIIHF
GKSGIPEKPITEEDLGRLAICIKVLSEQNAFMKNLFKVECRNAVSDMLDGSKQIIQYQGE
VNKKTVFSQPDESIAFLQLFVKSDQSVAENQFEVSLLQAINSPLMKKEDESMSSKLNKVA
QLTGFSDPIYAEAYVNVNQYDIVLDVLIVNQTTDTLQNVTLELATLGDLKLVEKPSSVTL
AGHDFSNIKASVKVASTENGIIFGNIVYDVSGGSGDRNCVVLNDIHIDIMDYIIPASCTD
TEFRQMWAEFEWENKVSVNTNITDTREYLDHIIKCTNMKCLTPEKAISGDCGFLAANLYA
KSIFGEDALANLSIEKPLNGGHDASVIGHIRIRAKSQGMALSLGDKINLSQKKIVKI
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgacatctattgctgagctcccttgctatacattaattaattatccgattgaaaatgaa
cctgtcacagaagcaaaactcaaagaagatcttgagcgtggtgacatacctgctaaaaca
acagctcttaaaaaagttatgtatcaacttcttaatggtgaaaagatgccttcaatattg
atgacaattattagatttgtgcttccactgcaagatcataccattaaaaaattgctcctt
attttttgggaaattgttccgaaaacatcaagtgatggcaagttattgcaagagatgatt
ttggtttgtgatgcttaccgaaaggatcttgaacaccctaatgagtttatacgaggatca
acattaagatttttgtgcaagttaaaggaatcagagctaatcgagccattaatgcctgca
attcgtgcctgtcttgaacatcgtcattcatatgttcgtcgaaatgctgtgtttgccatt
tatacaatatatagaaactttgactttttaatacctgatgctcctgaactggtttatgaa
tttcttgaaaaagaacaagatgcatcttgcaagcgaaatgcttttatgatgttaattcat
gttaatcaggaaaaagctttggactatctgagtacctgcattgagcaagttcattctttt
aatgaaatccttcaacttgttattgtggagcttatatacaaggtttgtattgcaaaccca
caagaacgctctcgatttatcaaatgcatttataatttgttgaattcttcttctaatgct
gtacgatacgaagctgctgggaccttagtcacactttcctcagctccaacagcagttaag
gctgcagcaagcaattacattgagctgattttaaaagaaagtgataacaatgtgaagctt
attgtacttgacaagttgatcaagttgaaagaaaatccagttcatgaaagagtcttacag
gaattagtaatggatattttgcgtgtgttagctagtcctgaccttgaggttcgaaagaaa
acattggacttggtacttgagttagtaactctaagaaacataaatgaggttgttatgatt
cttaaaaaagaggttactaaaacacacacagaaagtgagaagggagatttaatagggaac
tatcgtcaaatcttagtgagaacacttcattcttgttgcatcaaatatcctgatgttgct
ccaacagttgtgccaatgctaacagaattcttgggtgatgaaaatgagcaagcagctctt
gaagttttgttatttattcgtgaagctgttcttaaatttgtttctctgaaagctgtcata
ttagagaaattattagaaaatttccgtactattaagaatgttaaaatacatcgtcatgcc
ctttggattttaggagaatactgtcagcaatcaaatgatattctaagtgttatgaatgaa
attaaagatggacttggggagcttccccttgttgatgatgaattaagaaaaatggcaggt
acaaaaggtgaagaaactgatgaagacaaaaaatctgttccttctcagcgtatgatggtt
acagctgatggtacgtatgctactcaaagcgcttttgttaccaagtcatcaacagtcgaa
gctgatactcgaccacctctcagaaattatttgatgaagggtgatttttttattggcagt
gttattggaagtactcttacaaaactggcattaaagtttacagatgtatctcaagatata
gtttcaaaaaataagtttgttgctgagactatgtttgtgattgcaagtattattcatttt
ggtaaatctggtattccagaaaaaccgatcactgaagaagacttaggtagacttgcaata
tgcataaaagttttatcagaacagaatgctttcatgaaaaaccttttcaaagttgaatgt
cgaaatgctgtttcagacatgttggatggaagcaaacaaataattcagtatcaaggtgag
gttaataaaaaaacagtgttttcccaacctgatgaatcgatagcgttcctgcagcttttt
gtaaaatcagatcaatctgttgctgaaaatcagtttgaagtcagtttacttcaagctatt
aatagtcctttgatgaaaaaagaagatgaaagcatgagttcaaagttaaataaggtagca
caactgacaggattttctgatccaatttatgcagaagcatatgttaacgtgaaccaatat
gatattgttttagatgtacttattgttaatcaaaccaccgacacattgcaaaatgttact
ttagaacttgctactctaggagatttaaagctggttgaaaaaccatcatctgttacatta
gctggacatgacttttctaatattaaggcaagtgttaaagttgcatcaacagaaaatgga
ataatatttggtaacattgtttatgatgtgagtggtggaagtggtgatagaaactgtgtt
gtcttaaatgatattcatattgacatcatggattatataattcctgcatcttgcacagat
acagagtttaggcaaatgtgggcagagtttgagtgggaaaataaagtctctgttaacact
aacattacagacactcgtgaatatcttgatcatattatcaaatgtacaaatatgaaatgt
cttacgcccgaaaaggcaatatcaggtgattgtggttttcttgctgcaaacttatacgcc
aaaagtatatttggcgaggacgcgttagcaaatttgagcatagaaaaaccgttaaatggt
ggtcatgacgcctcagtcattggtcatattagaattcgtgccaaaagtcagggtatggct
ttgagtcttggcgataaaatcaatctctctcaaaaaaagatagtaaaaatatag
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