Hydra vulgaris (swiftwater hydra): 100214073
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Entry
100214073 CDS
T01080
Name
(RefSeq) periodic tryptophan protein 1 homolog isoform X2
KO
K14791
periodic tryptophan protein 1
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hmg03009
]
100214073
Ribosome biogenesis [BR:
hmg03009
]
Eukaryotic type
90S particles
Other 90S particles
100214073
Pre-60S particles
Other pre-60S particles
100214073
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
WD40
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_RIG_2nd
Beta-prop_WDR3_2nd
WD40_RFWD3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_Aladin
Beta-prop_WDR41
Beta-prop_Nup120_160
Beta-prop_DCAF4
Beta-prop_ACSF4
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
100214073
NCBI-ProteinID:
XP_002157986
UniProt:
T2MDY0
LinkDB
All DBs
Position
2:46828323..46868342
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AA seq
501 aa
AA seq
DB search
MLTCGTWVKRGVAKEVPDKVEISADELKELLQETKEQINDLGENVEDLDEMQEKIISGKE
DPVYDDSDEEIKAEYGLDDYDEEGTKMTGAGMAGLMYFVSTEEDPYVDLKGMDDEDKEDY
VIKKNDNLFVVGKMEEDHSCLDVYVYNEEESSQYVHHDILLESYPLCLEWLSYDPVLDGK
PGNYIAVGTMEPDILIWDLDIVDVVEPAFVLSGMKKKKKKKLKASSTNDNGHTDAVLSLS
WNHNIVNVLGSASADKTIKLWDMSKCECVHTLTHHTDKVQSIQWHPHESQSLLSGSFDKK
AVLLDCRTPNVFKSWSLSGECEKVLWDHLSPCNFYVSTDDGIVLYCDVRSDQPIFTIHAH
EEAVTGMCLSANIPGTLTTVSSDKKLKVWDTTGKKPTCVMSRDMKMGGLNFITACPDVNN
LCAVGGEKDGLRILNVMDTTKGKEYFRNEAMASESNAKSNKDDTTEKKMDIDFHVDAMKT
LSLKTDKNTGIIRKKKKKKKK
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgttgacatgtgggacatgggttaaaagaggagttgctaaggaagtacctgacaaggta
gaaattagcgctgatgaacttaaagaacttctacaagaaacaaaggagcaaataaatgat
cttggagaaaatgttgaagatcttgatgaaatgcaagagaaaattatttcaggaaaagaa
gatcctgtttatgatgatagtgatgaagaaataaaagcagaatatggtttagatgactat
gatgaagaaggtacaaaaatgacaggagctggtatggcaggcctaatgtattttgtttct
acagaggaagatccttatgttgatctcaaaggaatggacgatgaggataaagaagattat
gttataaaaaagaatgacaacttatttgttgtcggaaaaatggaagaagatcatagttgt
cttgatgtatatgtgtacaatgaggaagaatctagtcagtatgtgcaccatgatattctc
cttgaatcatatcctttgtgcttagaatggttaagttatgaccctgtcttagatggaaaa
cctggtaactatatagcagtaggaacaatggaaccagatattttgatttgggatttggac
attgttgatgtagttgaaccagcctttgttttatctggtatgaaaaagaaaaagaaaaaa
aaattaaaagctagttcaactaatgataatggacacacagatgctgttttgtctttatct
tggaatcataatattgtaaatgttcttggaagtgcgtccgcagataaaacaataaagctg
tgggatatgtctaagtgtgagtgtgtccacacactaacacatcatactgataaggttcaa
tcaatacaatggcatcctcatgaatctcaatcattattatctggttcctttgacaaaaaa
gctgtattgcttgattgcagaactccaaatgtttttaaatcctggtcattatctggagaa
tgtgaaaaggttttatgggatcatttatcaccatgtaatttctatgtgagcacagacgat
ggcattgttttatattgcgatgttagaagtgatcaaccaatttttacaattcatgctcat
gaggaagctgttactggaatgtgcttatcagctaatatccctggaactttgacaacagtt
tcgtctgataaaaagttaaaagtgtgggatacaacgggtaaaaagcctacatgtgtgatg
tcacgtgatatgaaaatgggtggtttgaattttatcacagcttgcccagatgtcaataac
ctatgtgcagttggtggagaaaaagatgggttgcgaattctaaatgtcatggacacaact
aaaggtaaagaatattttcgaaatgaagcgatggcttctgaatcaaatgcaaaaagtaac
aaggatgatactacggaaaaaaaaatggatatagattttcatgttgatgctatgaaaact
ctttctttgaaaactgataaaaatactggtatcattagaaaaaagaaaaagaagaagaaa
aaatag
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