Hydra vulgaris (swiftwater hydra): 100214142
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Entry
100214142 CDS
T01080
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hmg03009
]
100214142
Enzymes [BR:
hmg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100214142
Ribosome biogenesis [BR:
hmg03009
]
Eukaryotic type
Pre-60S particles
Helicases
100214142
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
HSP20
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
100214142
NCBI-ProteinID:
XP_002157158
UniProt:
A0A8B6XIM5
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Position
10:complement(29893313..29895297)
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AA seq
581 aa
AA seq
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MVDSFETLNVSHPLNESTLKAIQKLGFTKPTPVQAMCIPLILSRKDVVAEAVTGSGKTVA
FLVPIVEILINREEKLKTFDIGAIVLTPTRELAQQISKVLEHFTQESNLSQILFVGGKSI
KENISSFNDNGGNIVIATPGKLLALFESKDIDLKVAVKSLEILILDEADRLLSNSNFEQA
LTQIFHYLPKQRRTSLFSATQTDKVESFIRAGLRNPVQVLVREKKKLVTEISRTPDSLQN
YYFVSEGKEKLRNLVSFLRLHRDEKNIVFFNTCASVDYFSKLLTIILKTIPVVSLHGHMK
KKRNKVFEKFHSMKSGILMCTDVMARGIDIPQVNWVVQFDPPSNVEAFVHRCGRTARMGN
EGNALIFLLPNESSYIDFVRINQKCTLLDYSGVIEEIPDITSKIRKIVSKDRELYEKGLR
AFVSFIQCYHKHECSLIFQFEELDVCSLAVSFGLLHLPKMPELKNKDLKGFQALDINYAD
IPYKDKVKENQRKIKLEANKDVVKVLHKKTVKWSKQKEKFQKKKERKEKFERKRKLNEEM
EDDDVKELMREGRLLKKLKNKKISSSDFEKIIGNDDVDVIL
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggttgacagctttgaaacattaaatgtttctcatcctttaaatgaatcaactctaaaa
gcaattcaaaaacttggtttcactaagcctactcctgttcaagctatgtgcattccatta
atactttcaaggaaagatgttgtagctgaagcagttacagggtcaggcaagactgttgct
ttccttgtaccaattgtcgagatattaatcaacagagaagaaaagttaaagacttttgat
attggtgctattgtactcacgccaacaagagagctggctcaacagattagtaaagttctt
gaacatttcactcaggaatctaatttatctcaaatcctttttgttggaggaaaaagtatt
aaagaaaatatttcttcattcaatgataatggtggaaatattgtcattgcaacgccagga
aaacttttagcactctttgaaagtaaagatattgacttgaaggtggcagtaaaatcttta
gaaattttaattctagatgaagctgaccgtttattatctaattctaactttgagcaagct
ttaacacagatattccattatttacctaaacagaggcgaacaagtcttttttctgctact
caaacagataaagttgaatccttcataagagctgggcttcgaaatcctgtgcaagttttg
gttagagagaaaaaaaagttagtgactgaaattagtcgcactccagactctctgcaaaat
tattattttgtatcagaaggaaaggaaaagcttagaaatctggtttcttttctacgtcta
cacagagacgaaaaaaacattgtattttttaatacttgtgcctcagtagactatttttca
aaactactcactataatattaaaaacaattccagtagtatcgctgcacggtcatatgaag
aaaaaaagaaataaagtttttgaaaagtttcacagcatgaaatcaggtattttaatgtgt
actgacgtgatggcaagaggtattgatataccacaggtaaattgggtagttcaatttgat
cctccaagtaatgtagaagcttttgtacatcgttgtggacgaacggcaagaatgggtaat
gaaggtaatgctttgatctttctcttaccaaatgaaagttcatacattgattttgttaga
attaatcaaaaatgcactcttcttgattatagtggagtaatcgaggaaattccagacatt
acttctaaaataaggaaaattgtttcaaaggatagagaactttatgagaaaggacttcga
gcctttgtttcatttattcaatgctatcacaaacacgaatgtagtttaatatttcaattt
gaagaactcgacgtatgctcattagctgtatcgtttggattacttcatttacccaaaatg
ccagaactaaaaaataaggatttaaaagggtttcaagcattggacataaattatgctgat
atcccttataaagataaagtaaaagaaaaccaaagaaaaattaaactagaagctaataaa
gatgttgtaaaagtacttcacaagaaaactgtgaagtggtcaaaacaaaaagagaaattc
caaaagaaaaaagaacgtaaagaaaagtttgaaaggaaaagaaagttaaatgaagaaatg
gaagatgatgatgtgaaggaattaatgagagagggaagattgttaaagaaattgaaaaat
aaaaaaatttcttcaagtgattttgaaaaaattattggtaatgatgatgtagatgttatt
ttgtga
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