Hydra vulgaris (swiftwater hydra): 100214211
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Entry
100214211 CDS
T01080
Name
(RefSeq) exportin-1-like isoform X1
KO
K14290
exportin-1
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03008
Ribosome biogenesis in eukaryotes
hmg03013
Nucleocytoplasmic transport
hmg03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100214211
03008 Ribosome biogenesis in eukaryotes
100214211
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100214211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmg03019
]
100214211
03009 Ribosome biogenesis [BR:
hmg03009
]
100214211
03016 Transfer RNA biogenesis [BR:
hmg03016
]
100214211
03036 Chromosome and associated proteins [BR:
hmg03036
]
100214211
Messenger RNA biogenesis [BR:
hmg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
100214211
Ribosome biogenesis [BR:
hmg03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
100214211
Pre-60S particles
100214211
Transfer RNA biogenesis [BR:
hmg03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
100214211
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
100214211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
FliH
BID
BspA_v
Motif
Other DBs
NCBI-GeneID:
100214211
NCBI-ProteinID:
XP_047132277
LinkDB
All DBs
Position
5:14465610..14518130
Genome browser
AA seq
1086 aa
AA seq
DB search
MLREIQIMNLIMNQVINEVDANKLLDFNQKFDITLLDQVVNFMYQGHGPQHELAKKILGQ
LKEHPDSWMKVDSILETSNNQETKFYALQILENVIRTRWKMLPFEQREGIKQFIVGLIIK
ISSCEETAEKQKIYLNKLNLILIQVVKQEWPKHWPTFISDIVGASKSNESLCKNNLIILK
LLSEEVFDYSLGQMTQTKAKHLKDSMCQEFSSIFQLCEYVMDNSMNIPLIDATLKTLLKF
LNWIPLGYVFETKLISTLIYKFLNVPVFRNVTLQCLTEIGSINNAQYNEQFTVLYSLTLA
QLKQMLPLTTNLKLAYVNGSNDEQNFIQNLALFLCCFLKEHGVLLEKKIELKTSLLEGLQ
YLLLVSEVEDMEIFKICLEYWNSISSELYRESPFSAPIPHLGSPSAAGMTPRRIIYMPIL
SKIRYIMVSRMAKPEEVLVVENEHGEVVREFMKDTDTIDNYKNMRETLVYLTHLDYQDTE
HIMTEKLQNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVMVIKDLLGLCEVKRG
KDNKAIIASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQ
KCRRHFVQVNQGEVMPFIEEILNNISSIVCDLQPQQVHTFYEAVGFMISSQTDQVVTDRL
IEKCMFLPNQIWDGIIQSASKDINILRDPETVKQLMNILKTNVSACRSIGHPFVIQLGRI
YLDMVNVYKVLSENISSAVAQHGEGVTKQSLIKSMRGVKKETLNLINCWVNKSTDPKLVK
DNFIPPLLSTVLEDYNKNVPQAREAEVLNTLATVVNKLQNHVVEEVPLMFDAVFECTLNM
INKDFEQFPEHRTNFFILLQAVNQRCFPALIALAPPQFKLVLDSVIWAFKHTMRNVADIG
LEILLGILLNIQKHPQAAQVFYQQYYIMILQHVFSVVTDSSHTAALTKHASILSHMFTIA
ENNGITVPLFNPAQVQGGMSNELYIKEYAAALFKQAFPHLQHPQIKLFVQGLFDLDQNIA
QFKEHLRDFLVQIKEFQGEDCSDLYLDEREQQLRIAQEEKRKRQKDVPGILNPHEIGEEM
QDDLTI
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgctccgcgaaattcagattatgaatttaattatgaatcaagttataaacgaagttgac
gcaaataaattgctagattttaatcaaaagtttgatatcacattattagatcaagtagtc
aattttatgtaccaaggtcatggtccacaacatgaacttgcaaaaaagatattaggtcaa
cttaaagaacaccctgactcatggatgaaagttgattcaatacttgaaacctctaataac
caagaaaccaagttttatgcattacaaatacttgaaaatgtaattcgcacgcgttggaaa
atgctaccatttgaacaacgagaaggtataaagcagttcatagttggtcttataattaaa
atatcatcatgtgaagagacagctgaaaaacaaaagatttacttaaacaaactcaactta
attcttatacaggttgtaaagcaagaatggccgaagcactggccaacatttattagtgat
attgttggtgcaagtaaatcaaatgaaagtctttgtaaaaataaccttattattctaaaa
ctgctcagtgaagaagtttttgactattctcttgggcaaatgacacagactaaagctaaa
catcttaaagacagcatgtgtcaagagttctcttctatatttcagttgtgtgaatatgta
atggataattctatgaatattccacttattgatgcaacattaaagacgttactcaaattt
ttaaactggatacctcttggatatgtctttgaaactaagctcatatctactcttatttat
aaatttttaaatgttccagtatttcgcaatgttactcttcaatgcttaacagaaatagga
tctattaacaatgcacaatacaatgaacaatttactgttttgtacagtttaacattagca
caattgaaacaaatgcttcctttaactacaaatttaaaattggcttatgtaaatggtagc
aatgatgagcaaaactttatacagaatttagcactttttttatgttgttttttaaaagaa
catggtgtcttattggaaaaaaagattgagttaaaaacatcattgttagagggtttacaa
tatttgcttcttgtatcagaagtagaagatatggagatatttaaaatctgtctggaatat
tggaattcaatatcttcagagttgtatagagaaagccctttctctgcaccaatccctcat
ttaggctctccttcagctgcaggaatgactccaagaaggattatttacatgcctatttta
tccaagattagatatataatggtctcacgaatggcgaagcctgaggaagtattggtagta
gagaatgaacatggtgaagttgtgagagagtttatgaaggatactgatactattgataat
tacaaaaatatgagagaaacacttgtttacttgactcatctggactatcaagatacagaa
catattatgacagaaaagttgcaaaaccaagtaaatggtactgaatggtcatggaagaat
cttaatacattatgttgggcaataggttctataagtggtgcaatgcatgaagaagatgaa
aaaagatttttagtaatggtcattaaggatttacttggtttgtgtgaagtgaaacgtgga
aaagataacaaagctattattgcatcgaacatcatgtatattgttggtcaatatccaaga
ttcctaagggcacattggaaatttctaaagacagttgtaaataaactgtttgagtttatg
catgaaactcacgacggtgttcaagatatggcttgtgatacatttataaaaattgcccag
aaatgtagaaggcattttgttcaggtaaatcaaggtgaagttatgccatttattgaggaa
attcttaataatattagttcaattgtatgtgacttacaaccacaacaagttcacaccttt
tatgaggctgttggatttatgataagctctcaaactgatcaagttgtcacagaccgtcta
atagaaaaatgcatgtttttacctaatcaaatttgggacggtataattcaatctgcaagt
aaagacatcaacatccttcgtgatcctgagactgtgaaacagttaatgaacattttaaaa
acaaatgttagtgcttgtcgctctattggacatccatttgtcattcaattgggtagaata
tacttggatatggtcaatgtttataaagttctcagtgaaaatatatcttctgctgttgct
cagcatggtgaaggagtaacaaaacaatctttaataaaatcaatgcgtggagtaaaaaaa
gaaactttaaacttaattaattgttgggtgaacaagtcaactgatcctaaacttgttaaa
gataactttatacctcctttactgtccactgtgttggaagactataacaaaaatgttcct
caagcaagagaggctgaagttttaaacacacttgcaactgtggttaacaagctccagaat
catgtagtcgaggaagttccattaatgtttgatgccgtttttgaatgtacgcttaatatg
ataaacaaggactttgaacaattccctgaacatcgaacaaactttttcattcttttacaa
gcagttaatcagcgttgttttcctgccttgattgcacttgctcctcctcagtttaagctc
gttttggattctgtcatttgggcatttaagcacactatgcgaaatgtagcagatattggt
cttgaaattttactgggtattttgttaaacattcaaaaacacccacaagcagcgcaagta
ttttaccagcaatattacattatgatattacagcatgtattttcagttgtaacggatagc
tctcataccgcagctcttaccaaacatgcatcaatattatcacatatgtttaccattgca
gaaaacaatggtataaccgtaccattgtttaatcctgctcaagtacaagggggaatgtct
aatgagctttatataaaagaatatgctgcagctttgtttaagcaagcttttcctcattta
caacatccacaaataaagttatttgtccaagggttgtttgaccttgatcaaaacattgct
caatttaaagaacatttgcgcgatttcttagtgcaaattaaggagttccagggtgaggat
tgcagcgatctgtacttagacgaacgtgaacaacaacttcgtattgctcaagaggagaag
cgaaagaggcaaaaagatgtacctggtattctaaatccgcacgaaatcggtgaagaaatg
caggatgatctaactatttaa
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