Hydra vulgaris (swiftwater hydra): 100214282
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Entry
100214282 CDS
T01080
Name
(RefSeq) sex comb on midleg-like protein 2 isoform X1
KO
K11465
sex comb on midleg-like protein 2
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100214282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hmg03036
]
100214282
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
100214282
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
HMG_box
SAM_1
SAM_2
SAM_PNT
FAM163
Motif
Other DBs
NCBI-GeneID:
100214282
NCBI-ProteinID:
XP_047128413
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All DBs
Position
3:complement(20954201..21003783)
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AA seq
882 aa
AA seq
DB search
MNFQKKKKKIKNNERKDCLPQVQASVDVQHSTASQDLLGTLVNVAQNDCSMEMINANTIN
LIKSELSSPPLKRKKSFIEDSNQDATDSEQVSEHNTSRTNNGHFEMTNLPKKPLTPYMSY
RNMVFQDIKHKHPGCSPYDLACVISAKWSLLSDVERKVWEVKYEKEMKSYEKKLRLYHQK
ALKRKTNEDKSFSPIGDEVHELNKFDTLDYCSGCKKLKELQGFSAEINGRQVYRGDLCSK
ACFLEASKQLKCVDGSTYIKHSNSDPVSVNLSPFNWAEYLSETNSEPADWMYCRQASYPP
SNAFSVGMKLEARRHDQIKDSNQIIFSLATVAFMIGPRLLLHFDGSSSKYDIWTLCDSWD
IHPVGWTDRGSLLPPTGYRHDPKNYMQFYSLKIQKAELATARCFKKVPSMPPKNCFEVGM
KLEAVDKQNPSVIGVASVVRVQDELVYIEFDGYPGLGYSSHYGDRDFFPVGWCAHAKHPL
RIPGDAKNTLSNIGSSCSSSRYSPNSSSKLSMHEIAMHAEKTTPMKPKTLNQAEVCINIE
CVCGPYIDVEKLRKLTPIRKGEIIHVLKGVLEDIIACAISPKTVIGFLKPGRGNCVITTV
CEGTTFQCCLTVIDHVSSLWDILKQFADNLRSCPNLFSTEMYASCPRCLNKPSTAISIPL
IYQRLTSNPGSYLASSFQYPKSSRFIEFEDGDIHSVMDLEKNEPLSLNQIKCNQDSRNPD
KNTKKHVTWPAISQAEVFNYQPVYADTASQTESFCFTCNSLSHKCSLTDKNRLKDGGVEI
ESAEILSNIQAAGIDIMNRPSMWNVDDVVLFLKKTCIKEFSQVFKDHEIDGKALLLLQNE
HILHHMGFKLGPAVKLLDLIEDLKVAERSFSKTKEFIDTLTP
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgaattttcaaaaaaagaagaaaaaaataaagaataatgaaagaaaagattgtttgccc
caggtccaagcctcagttgatgtacagcactccactgcaagtcaggacttgttaggtaca
ctagtaaatgttgctcaaaatgattgttctatggaaatgattaacgcaaacacaattaat
ttaataaaaagtgaactttcttctcctcctttaaaaagaaaaaaatcttttattgaagat
tcgaaccaagatgcaacagattcagagcaggtttctgaacacaacacatctcggactaat
aatggtcattttgagatgacaaatttaccaaaaaagcctttgaccccatatatgagctac
agaaatatggttttccaagacattaaacacaaacatccaggttgttcaccatatgacttg
gcttgcgtcataagtgcaaaatggagtttgttaagtgatgtagaaagaaaggtatgggaa
gtaaagtatgaaaaagaaatgaaaagttatgaaaaaaagttgagattgtatcaccaaaaa
gctcttaaacggaaaactaatgaagataaaagtttttcaccaataggtgatgaagtccat
gaactaaacaaatttgacacattggattattgctcaggttgtaaaaaacttaaagagctt
caagggttttcagcagaaattaatggcagacaggtatatagaggggatctttgttctaaa
gcatgttttttagaagcttcgaagcagttaaaatgcgtagatggaagtacttatatcaaa
catagtaacagcgatccagtgtcagttaatttatcaccatttaattgggcagaatactta
tctgaaacaaattctgaacctgctgattggatgtactgcagacaggcttcttatccccca
tcaaatgcgttttcagttgggatgaaacttgaagcacgaagacacgatcaaataaaagat
tccaatcaaattatttttagtcttgctacagtagcctttatgattggtcctaggttgctt
cttcactttgatggctcttcttcaaagtatgatatatggacactatgtgattcatgggat
atacatcctgttggttggactgatcgtggctctttgcttccaccaacaggctataggcat
gacccaaaaaactacatgcaattttattctttaaagatccagaaagcagaacttgcaact
gcaagatgcttcaaaaaagtaccttcaatgccacctaaaaattgttttgaggttggaatg
aagttagaggcagtagataaacagaatccaagtgtaataggtgtggcctctgttgttaga
gttcaagacgaattagtgtatatagagtttgatggttaccctggtttaggatattcctct
cattatggagatcgtgatttttttccagttggctggtgcgctcatgcaaagcatccacta
cgaattccaggtgatgcaaaaaatactttatcaaatattggatcttcttgttctagttcc
agatactcccctaactcttcttcaaaactttctatgcatgaaatcgctatgcatgcagaa
aaaactactccaatgaagcctaaaacactaaatcaagcggaagtttgtatcaatatagaa
tgtgtttgtggcccttacattgatgtagaaaaacttagaaaactgactccaattcgcaaa
ggagaaatcatacatgttcttaaaggagttttagaagacatcattgcttgtgcaatatca
ccaaaaactgttatagggtttctgaagcctggtagaggaaattgtgtaatcactactgtt
tgtgaaggcacaacatttcaatgctgtcttactgttattgatcatgtttcatcattatgg
gatattcttaaacagtttgcagacaatttaaggtcttgtcctaacttattttcaactgaa
atgtatgcttcttgtccacgttgtttaaacaaaccttccactgccatctccataccattg
atttatcagaggttaacatcaaaccctggttcttatctggcttcttcttttcaatatcct
aaaagctctaggtttattgaatttgaagatggtgacattcattcagttatggatttggaa
aaaaatgagccattaagtttgaaccagataaagtgtaatcaagactctcggaatccggat
aaaaatactaaaaaacatgtaacttggccggcaatatctcaggctgaagtatttaattat
caaccagtttatgcagatacagcatctcaaacagaatccttttgtttcacttgtaattct
cttagtcataaatgtagtctcacagacaaaaataggttaaaagatggtggtgttgaaatt
gaaagtgcagaaatattgagtaatatccaagctgctggtatcgatattatgaatcgccct
agcatgtggaatgtggatgatgttgttctttttttaaagaaaacttgcattaaagaattt
tctcaagtatttaaagaccatgaaattgatggtaaagccctacttcttttgcaaaatgag
catattcttcatcatatgggttttaaactcggaccagccgtcaaacttctggatttgatt
gaagatttgaaggttgcggaacgttctttttcaaaaacgaaagagtttattgatactttg
actccatag
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