Hydra vulgaris (swiftwater hydra): 100214412
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Entry
100214412 CDS
T01080
Symbol
LOC100214412
Name
(RefSeq) nuclear pore glycoprotein p62
KO
K14306
nuclear pore complex protein Nup62
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100214412 (LOC100214412)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmg03019
]
100214412 (LOC100214412)
Messenger RNA biogenesis [BR:
hmg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100214412 (LOC100214412)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
DUF726
DUF4164
CHD1-like_C
LIP-1
Motif
Other DBs
NCBI-GeneID:
100214412
NCBI-ProteinID:
XP_047142792
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All DBs
Position
08:13712197..13736886
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AA seq
534 aa
AA seq
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MAYSFGTKPTTSTGFNFGTSATPAVSFSLGSGSTQPFSFTTPASQSSTASGGFSFGGPSV
QTSTSLTGFSFGESKPAAANSSLGNQPSDASKQPVFSGFSFNTSTATTKPTSNITFGSNL
SANSSFTAISTNAGIPASSAGGFSAPGSTKFSLSTPNSGFSLPALSTGVSLPASNVGFGL
PASTTGFSLPASTGFSAGSSSQPGGFNFGTPASSTSLSFGVSIPNTTSSTSLLSGFNLST
SKSSASTDLGKTVPSSNSLFSGATMPLSSSVATTNLSSSNALPLFSGLSSSSSASSAPLF
GSSAATSVPTFGLNSTTSVSSVGLPAVSTTTISAPSVKQMSYKELEETVDKWLHDLGEQE
KSFLNQAAQVNIWDKQLIDNGEKITALHNEVERIKAEQHRLDRELDFILSQQEELEEILV
PIEEQIKLQPINQSTQHTDIEREQTYRLAESIDSQLKRMMQDLSDVIDHINMANIEPVKG
RDESMSQIAKILNAHMDSLQWLDQNTSQLQRRVDEVNQALDTRKREHERTFRYE
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggcatatagctttggaacaaaaccaacaacatcaactggatttaattttggtacctct
gctacacctgcagtaagcttttcattaggatcaggctctactcagcctttttcatttact
actccggcatctcagagttcaacagctagtggtggcttttcctttggtggtcctagtgta
caaacttctacaagtcttactggattctcttttggagaatcaaaaccagctgctgcaaat
tcttcattaggaaatcaaccctctgatgcatctaagcaaccagtttttagtggattttct
tttaatacttctactgcaactacaaaacctacaagtaatataacttttggtagtaactta
agtgctaatagttcatttactgcaattagtactaatgcaggaattccagcttcctctgca
ggtggattttctgcgcctgggtctactaaattttcattgtctacgccaaattctggattt
tctcttcctgctttgagtactggagtctctcttccagcttcaaatgtaggatttggatta
cctgcttcaacaactggtttttctttgcctgcttcaactggattttcagctggaagctca
tcccaaccaggtggatttaattttggaacaccagcttcaagtacctctttatcttttggc
gtgtccatccctaatacaacaagttcaacgtctcttttgagcggatttaatttatctacc
tctaaatcttctgcatctactgatcttggtaaaacagtcccatcttctaattctttattt
agtggtgcaacaatgcctctatcttcttcagtggcaacaactaatttaagctcctcaaat
gctttgccactgtttagtggactttcttcttcatcttctgcatcttctgctccgttattt
ggatcctcagctgctacatctgttccaacatttgggttaaatagtacaacatcagtgtca
tctgttgggcttcctgctgtttccacaacaacaatttctgcaccatcagtcaaacaaatg
tcatacaaggaattagaagaaactgttgacaagtggttgcatgatcttggtgaacaagaa
aaatcattcctaaaccaagctgcacaagtgaatatatgggataaacagttaattgataac
ggagaaaaaattacagctctgcataatgaggttgaacgcataaaagcagaacaacacagg
ttagacagggaactagattttattttatcacaacaagaagaattggaggaaatacttgta
ccaattgaggagcaaataaaactacagcctattaatcaatcaacacagcatacagatata
gaaagagagcagacatatcgtttggctgagagtattgattcacaattaaaacgtatgatg
caggatcttagtgatgtaattgatcatataaatatggcaaatattgaaccagttaaaggt
cgtgatgaatctatgtctcagatagcaaaaattttaaatgctcacatggactctctacaa
tggctagatcagaacacaagccaactgcaacgaagagttgatgaagtgaatcaagcccta
gatactcgaaaaagagaacatgaacgaacttttcgttatgaataa
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