Hydra vulgaris (swiftwater hydra): 100214528
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Entry
100214528 CDS
T01080
Name
(RefSeq) ran GTPase-activating protein 1 isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100214528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmg03019
]
100214528
Messenger RNA biogenesis [BR:
hmg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
100214528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
LRR_8
LRR_4
LRR_5
Motif
Other DBs
NCBI-GeneID:
100214528
NCBI-ProteinID:
XP_047126282
UniProt:
A0A8B7DY53
LinkDB
All DBs
Position
2:50026503..50069925
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AA seq
570 aa
AA seq
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MASINSLTEQLSATKVDYVNELSFAGRKMKLDTAEDAKEIVDAIKNCKDLQALRLEGNTL
GLEAAIVIADALKSKKEFEMALWSDMYTGRLRSEIPPSLERLGDGIITAGAKLSVLDLSD
NAFGPDGVKGIKNLLTSEACYNLKTLKLNNNGLGIGGGKILADAFITCHNSSKLTRTPFA
LKVFISGRNRLENEGAKALSEAFKILGSLEEITMPQNGIRPEGIVYLAEAFQKNTNLKII
NINDNTCTESGAKALAKCIPSLLNLETLNVGDCLLKDSGALALAGALNAKMTNLKEIILS
FNEIRRDGGLAIAKSMANKEALQMLNLDGNQLGDSIKEIKRLMTDIGNVQALGSFEDNEE
PDDDEDEKSRESDISGEDTDEDIELQVKGIRLEKDSPLLVSDKVNEVEKISTIEDARKFL
SSPSLKEWQSLEAKQRKDLLKCVVREDLLPHADKVSKAFVEMCCSLSLDRQAIADVSDVV
LRTAFNDEKLSLDDLVSNLLIYMGLIKSEIKVEKIDDLKGPLIGLRNVILQEYFPRKYTS
HFIAFLMKSNRLLDKCQDERHALMQTLYQK
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaataaacagtcttacagaacagctttctgcaaccaaagttgactatgttaat
gagttaagttttgctggtcgcaaaatgaaacttgacactgcagaagatgcaaaggagata
gtcgatgccataaaaaactgtaaagatttgcaagcattaagattagaaggaaatactctt
ggtttggaagcagccattgtgatcgcagatgctttaaaatctaagaaagagtttgagatg
gctttgtggagtgatatgtatactggtcgtttgcgttctgaaattcctccgtccctagag
cgtcttggagatggaattattactgctggtgctaaactttcagtacttgatttaagtgat
aatgctttcgggcctgatggagtaaaaggtattaaaaatttacttacaagcgaagcctgc
tataatcttaaaacactgaagctaaataacaatggattaggcattggaggtggcaagatt
ttggcagatgcattcattacttgtcataattcaagtaaactaacacgtacaccatttgca
cttaaagttttcatatctggaagaaatcgattggaaaatgaaggtgctaaagctttatct
gaggcatttaagatattaggtagtttagaagaaataactatgccacaaaatggtatccgg
ccggaaggtattgtatatcttgctgaagcatttcaaaaaaatacaaacctcaagattatt
aacatcaatgacaacacttgcacagaatccggagcaaaagcgcttgcaaaatgtattccg
tccttgcttaacttagaaacactaaatgttggtgattgtcttctgaaagactcaggggct
ttagctttggcaggagcattaaatgctaaaatgacaaatttaaaagaaattattttgtct
ttcaatgaaattagaagagatggtggtcttgccatagctaaaagtatggcaaacaaggaa
gctcttcaaatgcttaatttagatggtaatcaacttggtgattctattaaagaaataaaa
cgtttgatgacagacattgggaatgttcaagcacttggatcatttgaggacaacgaagaa
cctgatgatgatgaagatgagaaaagtagggaatctgatatttcaggtgaagatactgat
gaagacatagaactacaagttaaaggaataagattagaaaaagattcacctttgcttgtg
tcagataaagttaatgaggtggagaaaatatctactattgaagatgctcgaaagttttta
tcaagtccttctttgaaagaatggcagagtttagaagccaagcaacgaaaagacttgtta
aaatgtgtggttagagaggatttacttcctcatgctgataaagtttcaaaagcttttgtt
gagatgtgttgttcattaagtttagacagacaagctattgctgatgtatcagatgttgtg
ctgaggacagcgtttaatgacgaaaaattatcccttgatgatcttgtatcaaacttatta
atatatatgggtcttataaagagtgaaataaaagttgaaaaaatagacgatcttaaagga
ccattaatcggacttagaaacgtaattttacaagaatattttccaagaaaatacacatca
cattttattgcatttcttatgaaatcgaacagattgctcgataaatgtcaagatgaaagg
catgccttgatgcaaacactttatcaaaaataa
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