Hydra vulgaris (swiftwater hydra): 100214544
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Entry
100214544 CDS
T01080
Name
(RefSeq) TBC1 domain family member 9B
KO
K19951
TBC1 domain family member 8/9
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hmg04131
]
100214544
Membrane trafficking [BR:
hmg04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
100214544
Endosome - Golgi transport
Rab GTPases and associated proteins
100214544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
PH-GRAM_MTMR6-like
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
100214544
NCBI-ProteinID:
XP_047125269
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All DBs
Position
15:7333578..7411081
Genome browser
AA seq
1338 aa
AA seq
DB search
MWVKPQEVLLANAFWETERANPYFLLQKRRGHGGGGGFASLLLGTLDNVFDNKPLPFRLL
LQTSESDICYLIATSSSRKEAEEHWAWLQKYLINTLETFDQLEDAKEFVKAKIESLVATH
LLHNASYVGDTDSEKFQSAVARFRRLFGMPNEEKLVNYYSCSYWKGKVPRQGWLYLSINH
LCFYSFLLGKEARVVIPWIDIISLERTSGLVLLDGIKVVTRNVTHYFSMLLHASDTFELM
EQLANIGMKRLLSEDSIEERKNESLKSNTIIKKSSSFLKSDLDARAASEHYRRIFHLPKD
EKLDVSLQCTLWSPFNKAHMWGTLYISPNYICYESKIKQLCLTILPMREISVVEKMSATS
IVPNAVLITTKMKTTFLFASLKDRDCLMEKISDFLSKTPPIKYNTLAMLDMPMQSSSFQP
ALKKLFSLTNKDGNPVKESVKEHLWSLHFEEYGRGVCMYRTPKTHELILKGVPDSLRGEI
WMLFSGTVNELVSNPGYYAKMVNESRGKMVMTSEEIERDLHRSLPGHPAFQTDVGIDALR
RVLTAYAWRNPNIGYCQAMNIVASVLLLYCTEEESFWLLTCVCENMLPDYYNTKVVGALV
DQAVFEVLTAEYIPLLHAHLKKLGILSMISLSWFLTIFINVVPLSCAVNILDCFFYDGVK
VLFQLAFTILEANKERLLQCVDDGESMTVLGHYFDRITSRDASHVLERSNRRQNLPFNTG
TPVDINDLIVQSYQKFGFMTSENIDKQRNQQRLRVMQHLEDSVKRNVLRHLAADSAFPAD
ELENLFTIFKTSHMKSRYWGNKKTDRVLPAEYSGWKDPHEEIWIDCERFQELFASLCPWG
GGELSDTLARRCFIVVNTSGSGMINFKEFTNVFEIICRGDMNKKMRLLYKMHLPPALTLE
EVAELSKTDNNSYDVVESAAEAVEDDAELSIFGDGNILVIKKSPFYRQQGIDEDMETDSL
MESKGHNLNLSSKSLTDRDRTNTKTSQPLEVEITANSLQTILDRQSPLNFLSEHFDGKND
RAKRTKAEDSNSYVVVNKPNSDTLDYVDFCVDNDVADSFTSITNDDQFDFDASNIFDMTK
SGRLKVKQFVEFMIEDKNEDDDDLPDMNQEQFIELWKSFFSLFREDPLKEQVLYQAIAQC
GTLLLQIGDLAKEYELSNDSKEVHTDHFTGNNDNKISSPIPENNMLERSCNKDIMETLLD
QNDLKDLKTQISDTKLTDEFTDYTIVNQNNLFLENEPLLSSLKSEQSIGSNLEIKHNITQ
ESDGIPDTIFGDVSKSESEVRLSALGALDREWRIKFRQFLACMVLETTLAEHFEKHFDLA
SAIEKFNQNGGFSCSQSS
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtaaagccacaggaagtgttgctggctaatgcattttgggaaactgaacgagca
aatccatactttttattacaaaaacggcgtggtcatggtggaggtggtgggtttgcatca
ttactgcttggaaccttagataatgtttttgataataagccgcttccatttcggcttctc
cttcaaacttctgaatctgacatatgttatttgatagcaacttcctcatcacgcaaagaa
gctgaggaacactgggcctggcttcaaaaatatttgattaatacattagaaacctttgat
caattagaagatgctaaagagtttgttaaagcaaagattgaaagcttagtagcgacacat
ttattacacaatgcatcatatgttggtgatacagattctgaaaagtttcaatcagcagtg
gcacgatttaggcgcttgtttggtatgcctaatgaggaaaagttagtaaattattattcg
tgtagctattggaaaggaaaagtacctcgacaaggatggctttatctctccatcaaccat
ctatgtttttattcatttttacttggaaaagaggctcgtgttgtcataccttggattgat
ataattagtttagagagaacaagtggattggttcttctagatggaattaaagttgtaaca
agaaatgttactcattatttttccatgttactgcatgcatcagatacttttgagttaatg
gaacaattggcaaatatcggaatgaaaagacttctttcagaggattcaatagaagaaagg
aaaaatgaaagcttaaagtccaatacaataataaaaaaatcttcttcttttctaaaaagt
gacttggatgctagagcagcaagcgaacattatcggcgaatatttcatttaccaaaagat
gaaaaacttgatgtaagtcttcagtgtactttatggagtccttttaacaaagctcacatg
tgggggacattgtatatttcaccaaactatatttgttatgaaagtaagataaagcaactg
tgtttaacaattttgccaatgcgtgagatttctgttgttgaaaagatgagtgcaacgagt
attgtacctaatgctgttcttatcacaactaaaatgaagacaacgtttttatttgcctcc
ttgaaagatcgagactgtttaatggagaagatttctgattttctctcaaagactccgcca
attaaatacaatacactggccatgttggatatgccaatgcaaagttcttcttttcaacca
gcacttaaaaaattattttctttgactaacaaagatggaaatccagttaaagaatctgtt
aaggaacatttgtggtctttgcactttgaagagtatggcagaggtgtttgtatgtaccgt
actccaaaaacacatgagcttatattgaaaggtgttccggatagtttacgtggtgaaatt
tggatgttgttttctggaacagttaatgagctggtctcaaatccaggttactatgccaaa
atggtcaatgaaagtcgtggtaaaatggttatgacgagtgaagaaattgaaagagattta
cacagatcactaccaggacatcctgcttttcaaactgacgttggaattgatgcactgaga
agggttttaactgcttatgcttggcgcaaccctaatataggttattgtcaagctatgaac
attgttgcgtctgttttattattatattgcacggaagaggagtcattctggctattaacg
tgcgtctgtgaaaacatgctacctgattattacaatacaaaagttgttggtgcgcttgtc
gatcaagctgtgtttgaagttttgactgctgaatatattccattattgcatgctcattta
aaaaagcttggtatactgagtatgatttcgttgtcatggtttctcaccatcttcataaac
gttgtacctttgtcatgtgcagtaaacatactagattgcttcttttatgatggcgtaaag
gtgttgtttcagctggcgtttactatccttgaagcgaataaagaacgtttattacaatgt
gttgacgatggagagtcaatgactgttttaggacattattttgatcggattactagtaga
gatgcttctcatgtacttgagagatctaaccgcaggcagaatttgccatttaatacagga
actccagtggatattaacgatttaatagtgcaatcttatcaaaaatttgggtttatgaca
tctgaaaatatcgacaagcaaagaaaccaacaaaggttgcgcgttatgcagcatttagaa
gacagcgtaaaacgaaacgtgttgcgacatttagctgctgatagtgcatttccagcagat
gagctggaaaacttatttacaatattcaagacatcacatatgaaaagtcgctactggggt
aataagaagactgatagggtattacctgctgaatacagtggctggaaagatccacacgaa
gaaatttggatcgattgtgaacgttttcaagaattgtttgcctctctctgtccgtggggt
ggaggagagttaagtgacacgcttgcacggagatgctttatagtggtaaacacgagtggt
agtggaatgataaacttcaaagagttcacaaatgtgtttgaaattatttgtcgcggagat
atgaacaaaaaaatgcgtttgctttataaaatgcatttgcctccagccctcacactggaa
gaagttgcagagctttctaagacagacaataattcgtatgatgttgtagaaagtgcggca
gaagcagttgaagatgatgccgagttgagcatttttggtgatggcaatatcttggtcatt
aaaaaatcacctttttatcgtcaacaaggcatagatgaagatatggagacagattcatta
atggagtctaaaggacataatcttaatttatcgtccaaatctctaactgacagagatcgc
acaaacacaaaaacaagtcagcccttagaggttgagattacggcaaattctctacaaacg
attttagacagacaaagtcctttaaactttctttcagaacattttgacggaaagaacgac
agagcaaaacgaaccaaagcagaagattctaactcttatgttgtagttaacaaaccaaac
agtgacaccttggattatgttgatttctgtgttgataatgatgttgctgattcatttact
agcattacaaatgatgatcaatttgacttcgatgcttcgaacatatttgatatgacaaaa
tcgggacgtctaaaagtgaagcagtttgttgaatttatgattgaagataagaatgaagac
gatgacgacttaccagatatgaatcaagaacaatttattgaattgtggaaaagttttttt
tcactgtttcgagaagatccattaaaagaacaagttctttaccaggctattgctcagtgc
ggaacactattattacaaatcggagaccttgcaaaagaatatgaattgtccaacgactct
aaagaagttcacaccgatcattttactggtaataacgataataaaataagttcgcccatt
ccagaaaacaatatgcttgaaagatcctgtaataaagatataatggaaacactgctagat
caaaatgatttaaaagatttaaaaactcaaatttcggatacaaaattaactgatgaattt
acagattacactattgtaaatcaaaataatttgtttctggagaatgaacctttattatct
tcattgaaatccgaacaatcaattggatccaatttagaaataaaacataacataacacaa
gaatccgatggcattcctgatacaatctttggcgacgtaagtaagagtgagtctgaagtt
cgcttgtcagctctcggtgctctggacagagagtggcgtataaaatttcgtcaattttta
gcttgtatggtattggaaactacgctggcagaacattttgaaaaacatttcgatcttgct
agcgcaattgaaaagttcaatcaaaatggcggcttttcttgttctcaatcgtcttaa
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