Hydra vulgaris (swiftwater hydra): 100214661
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Entry
100214661 CDS
T01080
Name
(RefSeq) transcription initiation factor TFIID subunit 2-like isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100214661
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hmg01002
]
100214661
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hmg03021
]
100214661
03036 Chromosome and associated proteins [BR:
hmg03036
]
100214661
Peptidases and inhibitors [BR:
hmg01002
]
Metallo peptidases
Family M1
100214661
Transcription machinery [BR:
hmg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100214661
Coactivators
SAGA/TFTC/STAGA complex
100214661
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
100214661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
Peptidase_M1_N
HEAT_2
Motif
Other DBs
NCBI-GeneID:
100214661
NCBI-ProteinID:
XP_047134865
LinkDB
All DBs
Position
6:complement(36257362..36319789)
Genome browser
AA seq
1142 aa
AA seq
DB search
MKKSNYGNKEYKLIHQILCLTAVDFNNKTIYGFAELHILPLVNHLSRIKVNCKQSKIFRI
CVKGSGLDTWLEASFLTQDPGINFCPDTVQNLDVLLNKLEAAVLQTEPDQNGGEIIVQLP
SETIPLIAEKRTLRISIEFVLEDPKGGIHFVNPEIEGSPVKRKSHLFTYKYGNSSRLWFP
CIDSFSEVCTWKIEVTTDIGMIVVCPGNLVEKVYTSDEKQATHHFILSTPTSASNIGLAI
GPFEVVVDQELSDVMCFVLPGLSPLVIHTTSFLGDAIEFFEETLNAQYPFSAYKLVFVDE
AFMSSQTFTSMNILSTNLLHPESVIEQTFISRKILVNGLAEQFFGMFVGMHSWCDLWLIQ
GIFRYLAGLFLKKHFGNNDYRLWLHKELELLCNYELVGPGLPPLYPYSLVTHSIDGKQES
TNEISQSSAIQQHPHIISSKQLKMIGTKSHFVMRIIELRIGQDLLLQAFNKSLSLASAAA
AKNTDMMLWSNMLLSTTGFLKTISTVSGKDINIFLDQWICHSGVAKINASFSFNRKRNII
ELEVSQCVGKGCQKYVGPMIICIQELDGSFPHTVQVEDIISQHELPCHSKSRRNKKKKIP
LITGDEVDMDLSVTLDSDSPVLWVRIDPDMTWPRHVSLQQPDYMWQYQLRYERDVTSQIE
AVRALEKYPCSGTRSALIDTINNVEAFFKVRMEAAFCLAKIANTEVEVWDGESAMIEIFE
KMFGSNACASIPKFNNFSNFTGYFMQKVLPTSISMLKNSQSQCTRRTLQFILELLKYNDN
RFNQFHDGFYVSSLIDGLKNVIGPALHLASATSFDERKNLPVDEHAKLVLSEVVRRLNMD
KIIPSFRYAVTCSCLKVIRCMQTNGHIPAESALFKKYSKYGLFEDIRITALKIMVDFVSV
HFSETDFDWLLKILENEPSPRVKHTVLQCLVDTPPLLNQTQINNYGSIMYSRLWKLINFD
SASNYRYRCDIIDFLKVMYAKYPKASLSTSEFKEKKEKGTVHSEREFLNIKREEPPVKKK
RTSSRESTSRESSPKLNILDSDLSSKIKLKIKFGGDDVSHVSGHDYPGNIATKQKNADEN
LITKKQKKKKKKKHKEKHKMPLDIPGTYSNMLDDRLAADDSPLGTLNMPISSGYISGSPE
LS
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagagtaactatggaaacaaagaatacaaattaatccatcaaatattgtgctta
acagcagttgatttcaacaacaaaactatatatggctttgctgagctccatatattgcca
cttgtcaaccacctcagccgaattaaagttaactgcaaacaatctaaaattttcagaatc
tgtgtaaaaggttctggactagatacttggttggaagcatcatttttaacacaagatcct
ggaataaacttttgccctgatactgtgcagaatctagatgttcttttaaataaattagaa
gctgctgttttgcaaacagaacctgatcaaaatggtggagaaattattgtgcaactgcct
agtgaaacaatacctcttatagctgagaagagaacacttcgcattagcattgaatttgtt
cttgaagatccgaaaggtggaatccattttgtaaatcctgaaatagaaggaagtccggtg
aagagaaagtcacatttatttacttacaaatatggaaactcaagtcgactctggtttccg
tgtattgattcattcagtgaagtttgtacctggaaaatagaagttacaacagatattgga
atgattgttgtttgtccaggaaacttagtagaaaaagtgtacacatctgatgaaaagcaa
gctactcatcatttcattcttagtactccaacatcagcatcaaatattggtttggcgatc
gggccttttgaagtagttgttgaccaagaactctctgatgttatgtgttttgttttacct
ggattatctcctcttgtcattcatacaacctcatttcttggcgatgccattgagtttttt
gaagaaacactaaatgcacagtaccctttctctgcttacaaacttgtatttgttgatgaa
gcatttatgtcatcacaaacctttacatcaatgaatattctcagcacaaatcttttacat
cctgaaagcgttatagaacaaacttttatttcaagaaagattttggtgaatggtttagct
gagcagttctttggaatgtttgttggtatgcattcttggtgtgatctttggttgattcag
ggtatctttaggtatttagctggtttatttttaaagaaacattttggaaataatgattac
aggctgtggttacataaggaattagagttgctttgtaattatgagctggttggaccaggc
ctccctccactatacccttattcattagttactcattccatagatggtaaacaagaatca
acaaatgaaatatcacagagttcagctattcaacaacatccacatataatatcaagtaaa
caactaaaaatgattggcacaaaaagtcattttgtgatgcgcattattgagcttcggatt
ggtcaagatcttttacttcaggcttttaacaagtcattatctttggcatctgctgctgct
gcaaaaaatacagacatgatgttgtggagtaatatgctgctatccacaactggttttttg
aaaactatttctactgtctctggcaaagatataaatatttttcttgatcaatggatctgc
cattcaggtgtagcaaaaataaatgcttctttcagtttcaaccgaaaaaggaatatcatt
gagttagaagtcagtcagtgtgttggaaaaggttgccagaagtatgtgggtcctatgatt
atatgcatacaagaattagatggatcatttccacatactgttcaagtggaagatattatt
tctcaacacgagttgccatgccattctaaaagtcgtcgtaataaaaagaaaaaaattcct
cttattactggtgatgaagtggacatggatttaagtgtgacattagattctgattcacct
gtgctatgggttcgtattgatcctgatatgacatggcctagacatgtttccctgcaacaa
ccagattacatgtggcagtatcagcttagatatgaaagagatgttacttcgcaaatagag
gctgttcgtgcactggaaaaatacccatgctcaggtaccaggagtgctctgattgacaca
ataaataatgtagaagcattttttaaagttaggatggaagcagctttttgtttagctaag
attgctaacacagaagtagaagtttgggatggtgaaagtgccatgattgaaatatttgag
aaaatgtttggctccaatgcatgtgcttccattccaaagtttaataacttttctaatttt
actgggtattttatgcaaaaggtactacccacatccatatcaatgctgaagaactctcag
tcacagtgcacaagaaggacactgcagtttatattagaacttctaaaatataatgataac
aggtttaaccagtttcatgatggattttatgtaagttcattgattgatggtttaaaaaat
gtaattggtcctgcactacacttagcatcagctacttcatttgatgaacgtaaaaatctt
cctgttgatgaacatgccaagcttgtactatctgaagtagtccgcagattgaatatggat
aaaataataccttcttttcgatatgctgtaacttgcagttgtttgaaagtaattcgttgc
atgcagaccaatggtcatattccagctgaatcagcgctttttaaaaagtattcaaaatat
gggttgtttgaagatattcgaataacagctctcaaaattatggttgattttgtctcagtt
cacttttctgaaaccgattttgattggttactaaagatattagaaaatgagccttcacca
agagtaaagcacactgttttgcaatgcttagtagatactccaccattattgaatcagaca
cagatcaataactatggatcgattatgtactcaaggttatggaagctaatcaattttgat
tcagcaagtaattatcgttatcgttgtgatattattgatttcttgaaagtcatgtatgca
aaatatccaaaagcatcattgagtaccagtgaattcaaagaaaaaaaggaaaaaggaact
gttcattctgagagagagtttttaaatataaagcgagaagagccacctgtcaaaaagaag
cggacaagctctagggagtcaacttccagagaatcctctcctaaattaaatattttagat
tcagatctttctagcaaaataaaattaaaaataaaatttggtggtgatgatgtaagtcat
gtcagtggtcatgactaccctgggaacattgcaactaagcaaaagaatgctgatgaaaat
cttattacaaagaagcagaaaaaaaaaaagaaaaaaaagcataaggaaaaacacaaaatg
ccattagatatacctggaacgtattcaaatatgttagacgatcgtttagctgcagacgat
agtccgcttggaacattaaacatgccaatatcatcaggttatattagtggatctcctgaa
ctttcttga
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