Hydra vulgaris (swiftwater hydra): 100214687
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Entry
100214687 CDS
T01080
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100214687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hmg03021
]
100214687
Transcription machinery [BR:
hmg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
100214687
Prokaryotic type
Archaeal type
TFE
100214687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zf-C2H2_ZNF451_C
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
100214687
NCBI-ProteinID:
XP_012565299
UniProt:
A0A8B7E469
LinkDB
All DBs
Position
3:34288600..34290200
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AA seq
408 aa
AA seq
DB search
MNNEQMKIEEPDLLTEVPPILKRLAKTVAYALYEPEQIVTINILTKYPCIDEDTLMEKLQ
FDKRQLRQVLGRLKNDKLVKQRVVKEKQQDTGVLNVYNFYFINYNLFVNVVKYRLDHMRK
KLENEEQQAKNRPSFQCEQCSKTFSDLEVDRLLDFSTGLFKCTFCNGLVEEDVSYIKNYS
SSSSLAKFNEQLETIFKLLRQCENINLAPEVLEPTPSTAALKMSSSAKSHSHSKSGWSND
RKSIDIYNQKIQINVGAEVEQAEAKVIKELPVWLSQSTVFEEKSNENFFTNTSDIKANID
KNNGVTEDHEIMSDLLVYESSSKKPRLESPAEVTAHESSDSEPDSDIFSDVLTKDVKKSE
DEDGEVTVRVGELKIPLSEVNDDIISKMSDSERDIYYKLYNEAYEQFY
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaataacgagcagatgaaaattgaagagccagatttactgacagaagtaccacctatt
ctaaagagattagctaaaacagttgcatatgctctttacgagcctgagcaaattgttact
ataaacatattaacaaaatatccgtgtattgatgaagacacacttatggaaaaacttcaa
tttgataaaaggcaattaagacaagttctcggacgactaaaaaacgataaattagtaaaa
caaagagttgttaaagaaaaacagcaagacactggtgttttaaatgtgtataatttctat
tttattaattacaatttgtttgttaacgtagtaaaatatagattagatcatatgcgaaaa
aaactagaaaatgaagaacaacaagcaaagaatcgtccatcattccagtgtgagcagtgc
agtaaaacatttagtgatttagaggttgatcgattgcttgatttttccactggcttgttt
aagtgcactttttgtaatggtcttgttgaagaggatgttagttatataaaaaattacagt
agcagttcatctttagcaaaatttaatgaacaactagaaactatttttaaattacttcga
caatgtgaaaatataaaccttgcacctgaagtattggagcctactccttcaactgctgca
ttaaagatgtcatcgtcagcaaagtcacattcacattcaaaatctggttggtctaatgat
cgtaaatcaattgatatatacaatcaaaaaatacagataaatgttggtgctgaagttgag
caagctgaagcaaaagtcattaaagaacttcctgtatggctatcacaaagtactgttttt
gaagaaaaatcaaacgagaatttttttaccaacacctctgatatcaaagccaatatcgat
aaaaataatggagtaacagaagatcatgaaataatgtcagacttacttgtttatgaatct
tctagtaaaaaaccaaggttagaaagccctgctgaggttacagcacatgaaagttcagat
agtgagcctgattcagatatttttagtgatgtcttaacaaaagatgttaaaaagagtgag
gatgaagatggtgaggttactgttcgagttggagaactaaaaattccactttctgaagtt
aacgatgatattatttctaaaatgtctgacagtgagcgagatatatattataaactatac
aatgaggcgtatgaacaattttattga
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