Hydra vulgaris (swiftwater hydra): 100215393
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Entry
100215393 CDS
T01080
Name
(RefSeq) nucleoporin p58/p45
KO
K14307
nucleoporin p58/p45
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100215393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmg03019
]
100215393
Messenger RNA biogenesis [BR:
hmg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100215393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
Zw10_N
Tektin
DUF885
Fez1
DNA_topoisoIV
Motif
Other DBs
NCBI-GeneID:
100215393
NCBI-ProteinID:
XP_002163442
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All DBs
Position
2:complement(13493583..13520451)
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AA seq
448 aa
AA seq
DB search
MATSSGFTFGATNNNSNIFGAKTTTSTFSFGTAPAFSGFGLSNTSNASSTLAFGATTNTN
PGFSFGGFGAGLTSTSLPSSSTGSLFGSKPATTGFSLFDTKSTTATSLPFQLGVATSAPS
QLQSDSSFALAKPLENPKEEKVPAEFVTYINETENYLKTQRELKDEISRISSQTVNEIQD
QLNTMNQAIAIISNSLQRDKLAAEYLKNQVGQELKNTETARLIRDLPLSNLHDFNAPMQY
FQSLVLTFQIRIKKSRQEIEELEVFLSSSSPSNQFTPQDLKVVLKRLSESFLGLAAELQT
VHEAVKMIKQKYLQFLRSTFNDYSDPFTSRRKKDLREKEPSDFNGPSPFPMIQGAGIISG
AFKIDNKPQNLGYNLRNSSAFPKPSGTGLTRSLSFDEIAKSTPFSVSTEFGSSTNNNLPL
GQSPATSSSSNSSFKLRNPPNGKRGKLY
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaagtagcggatttacctttggtgcaactaacaacaatagtaatatatttggt
gccaaaactacaacttcaacgttttcgtttggtaccgctcctgcgtttagtggatttggt
ttaagtaatacttctaatgcttcatcaactttagcatttggtgcaacaacaaacacaaat
cctggattttcatttggtggttttggtgctggtctaacatcaacatcattacccagttcc
agtacaggtagcttatttggaagtaagccagcaacgacagggtttagcttgtttgacaca
aaaagtactactgctacatcattacctttccagctaggtgtagcaacaagtgcaccttca
caattacaaagtgatagttcatttgcattagcaaaaccacttgaaaatcctaaagaagaa
aaagttcctgcagaatttgttacatatattaatgaaacagagaattatcttaaaacgcaa
agagaattgaaggatgaaatatccagaatatcttcacagacagttaatgagattcaagat
cagttaaacacgatgaatcaggcaattgcaataatatcaaatagtttgcaaagagacaag
ctagctgctgaatatcttaaaaatcaagttggccaggaattaaaaaatacagaaacagct
cgtcttattcgtgatctacctctatccaatctgcatgactttaatgctcctatgcaatac
tttcaatcacttgttcttacttttcaaattagaataaaaaaatctcgccaagaaatagaa
gagctagaagtctttctatcttcatcttcaccctctaatcaatttactccacaagattta
aaagttgtacttaaaaggctaagtgaatcatttcttggacttgctgctgaactccagact
gtccatgaagctgttaagatgatcaaacaaaagtatttacagtttcttcgttcaacattt
aatgattatagcgatcccttcacttcaagacgtaaaaaagacttgcgagaaaaagagcca
tcagattttaatggaccatcgccatttcctatgattcaaggagctggaattatatccggt
gcatttaaaattgacaataagcctcaaaatcttggatataatttacgaaattcttctgct
tttccgaagccttctggtactggtttaactcgcagtttgtcatttgatgaaattgctaag
tcaactccgttcagtgtttcaacggaatttggatcgtcaactaataacaatttgccttta
gggcaatcaccagccactagctcatcttctaattcatctttcaagcttcgaaaccctccc
aatggaaaaaggggaaagttatattag
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