Hydra vulgaris (swiftwater hydra): 100215401
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Entry
100215401 CDS
T01080
Name
(RefSeq) mRNA export factor GLE1
KO
K18723
nucleoporin GLE1
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03013
Nucleocytoplasmic transport
hmg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100215401
03015 mRNA surveillance pathway
100215401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmg03019
]
100215401
Messenger RNA biogenesis [BR:
hmg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100215401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
DUF7591
Motif
Other DBs
NCBI-GeneID:
100215401
NCBI-ProteinID:
XP_002165244
UniProt:
A0A8B6XQ71
LinkDB
All DBs
Position
1:complement(27680758..27718245)
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AA seq
724 aa
AA seq
DB search
MTDIKSVVDVLKNTSKGKLNYSSNLTPLTKAAFPVIKHTQIIKESTFSGKQFENYYSPER
YDEKGNEDQLFKEKCLKSRSSRITSLDVDGQNDEKQSILSTNFTSMHIVKQLQSCILVQN
KIDQEYRDCSVKKQKQRVENMKLVISEIDQECEFTIENIEKNVVVKLDNESISLSAQESE
ISQLSSHEMQNFQRVKMLRDEAVQKKRVEAEEERKKIQYAIKQKEEAKKRIRDNKIKLFG
FVEPAQVLKKNIISLFQENKDKNNLPQCVTTLLSQVSTCFSQLTQIVNDGVNGEKEDLNI
EIKQASHLLECLEKLFKACETEKEKIQLDYINDKKIKAEKDLAFASTNNVKVSTSQPDIQ
HSVAQSVAKTTITPEYTVVNKDNFNIDFPPELENIKTLLLQDINHYTDVFAFKGYLQLNQ
LLSQIEKQCEPLDKSTTQEKKNYKFNLYKVINTTINAISDESSKHLLAKLLKLFSLLTEQ
TVEIGNKTVNTKLDPLALFLCKNLLAKKLVLQGATQIASNYQTAFPIAAIAVCVWTLFPD
CGQLILAHFYRNCPYLVPLYIPYTKNMDIQEYHKLIGYDIDDGKIEDEDKYLKKISGIVR
LYAAIVQTDMPPFLGDKPHPHGLDYAWVWLTRFLTLEPRPSISAVIIYDFLEVAGHAMMK
RFGKQFQKLLFILYDNYLPKVIKVTSNDGKPMIIRLKMFLDACVKEGRIKEPEGFLPKQW
WNRN
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgacagatataaaaagtgttgttgatgttttaaaaaatacatcaaaggggaagcttaat
tattcttcaaatttgactccgttaacaaaagcagcttttccggtaataaaacatacacag
ataattaaagaatcaactttttctggtaagcagtttgagaattattattcaccagaaaga
tatgatgagaaaggaaatgaagaccagctttttaaagagaaatgtctaaaatcaagaagt
tcaagaataactagtcttgatgttgatggacaaaatgatgaaaaacagagtattttatca
accaattttacatcaatgcatattgttaaacagcttcaatcctgtatacttgttcaaaat
aaaatagaccaagaatatagagattgctctgttaaaaagcaaaaacaacgagttgaaaat
atgaaacttgtcataagcgaaatcgatcaggagtgtgagttcacgatagaaaacattgag
aaaaatgtggtggtgaagcttgataatgaatctatctctctcagtgcacaggaaagtgaa
atcagtcaactctcatctcatgaaatgcaaaattttcaacgagtaaaaatgctacgagat
gaagctgtacagaaaaaacgagtcgaagcagaggaggaacgaaaaaaaattcagtatgca
ataaagcagaaagaagaagctaaaaaaagaatcagagataataaaataaaactttttggt
tttgtggagcctgcccaagtattaaaaaaaaatattatttctttatttcaagaaaacaaa
gacaaaaataatctgccacaatgtgttactacactattgtctcaagtttccacatgtttt
agtcagttaacacaaattgttaatgatggcgtaaatggtgaaaaagaagatttaaatatt
gagataaaacaagcttctcatttgttagaatgcttggaaaaactttttaaagcttgtgaa
acagagaaagaaaaaatccagcttgattatattaatgataaaaaaataaaagctgaaaaa
gatctggcttttgcttccaccaacaatgtcaaagtttctacatcccaacctgatattcaa
cattcagttgcacaatcagttgcaaaaacaacaattactcctgaatatactgttgttaat
aaagacaattttaacattgattttccacctgagctggaaaacattaaaactttactgttg
caggatattaatcattacactgatgtatttgcatttaaagggtatttacaattgaatcaa
cttctatcacaaattgagaaacagtgtgagccattagataaatctactacacaagaaaaa
aaaaactataagtttaatttatacaaagtaataaatacaacaataaatgcaatatctgat
gaaagttccaaacatttgttggctaagttattaaagttattttctttacttactgaacag
acggtagagattggcaacaaaactgttaataccaagttggatccacttgcattatttctg
tgtaagaacctactggcaaagaaactagttcttcaaggtgctacccaaatagcctctaat
taccaaacggctttcccaattgcagctatagcagtatgcgtttggaccctttttcccgac
tgtggacagctgattcttgctcatttttataggaattgcccttatcttgtgccattatac
ataccatacacaaaaaatatggacattcaagagtatcataaattgattggctatgatata
gacgatggcaaaatagaagacgaagataaatatttaaaaaaaatttctggcatagtacga
ctttatgcagcaatagtccaaacagacatgccaccttttcttggagataagccgcatccg
cacggacttgactatgcttgggtctggttaactcggtttcttactttagaaccacgtccg
tctataagtgcggtcattatttatgattttttagaagttgctggtcatgctatgatgaaa
cgatttggaaaacaatttcaaaagttgctttttattttgtacgataattatttacctaag
gttataaaagtgacttctaatgatggaaaacctatgattatccgattaaaaatgttttta
gacgcttgtgttaaagaaggaagaataaaagaacctgaaggctttttgccaaagcaatgg
tggaatagaaattag
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