Hydra vulgaris (swiftwater hydra): 100215452
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Entry
100215452 CDS
T01080
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog isoform X1
KO
K12184
ESCRT-I complex subunit VPS28
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100215452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hmg04131
]
100215452
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hmg04147
]
100215452
Membrane trafficking [BR:
hmg04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
100215452
Exosome [BR:
hmg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100215452
Exosomal proteins of other body fluids (saliva and urine)
100215452
Exosomal proteins of colorectal cancer cells
100215452
Exosomal proteins of bladder cancer cells
100215452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
Motif
Other DBs
NCBI-GeneID:
100215452
NCBI-ProteinID:
XP_002157661
UniProt:
T2M3I5
LinkDB
All DBs
Position
2:complement(12776014..12791524)
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AA seq
218 aa
AA seq
DB search
MSGRSSFGQGVLRPELLQEVKLYTNAREREKYDNMADLFAVINTLQCLEKAYIKDAVTSK
EYTAACSKLLVQYKVAFKQVQSAEFPTIEAFTKKYRLDCPAAMARIQEDRPITIKDDKGN
TSKSIADIVMLFITIMDKLRLNIHAMDEIQPDLRDLKLTLDRLSVVTEDFEGKIAVEKWL
KTLGEMRAHDELTEEQVRQMLFDLEQSYNAFNRLLQHA
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgtctggacgaagttcttttggccaaggtgtgttaagacctgagctgcttcaagaagtg
aagttgtacacaaatgcaagagaacgtgaaaagtatgacaatatggcagatttgtttgca
gtcattaatactctacaatgcttagaaaaagcatatattaaggatgctgttacttctaaa
gagtatactgcagcttgcagcaaactattagttcaatacaaggttgcttttaaacaagta
caaagtgcagagtttcctacaatagaagcttttacaaaaaaataccgactagattgccct
gctgcaatggcaagaatacaagaagatcgtccaataacaattaaagatgataaaggcaat
acaagcaagtcaattgcagatattgtcatgttgttcattacaatcatggataagttgaga
ttaaacatacatgccatggatgagatacaacccgatttaagagatttaaaactaactttg
gatcgattgagtgttgttactgaagattttgaaggaaaaatagctgttgaaaaatggtta
aaaacgcttggagaaatgagagcacatgatgaacttaccgaagaacaagtaaggcaaatg
cttttcgatcttgagcaatcttacaacgcgttcaacagattgttgcaacatgcataa
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