Hydra vulgaris (swiftwater hydra): 100215706
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Entry
100215706 CDS
T01080
Name
(RefSeq) remodeling and spacing factor 1 isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100215706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hmg03036
]
100215706
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
100215706
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
KIAA2026_hel
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
100215706
NCBI-ProteinID:
XP_012558246
UniProt:
T2M7E6
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Position
4:complement(39994900..40065736)
Genome browser
AA seq
1120 aa
AA seq
DB search
MKSTEFIKDCIDLNVNESSTELVLNCKNNLDKIENMSKSEEKKNEKPCEQISVKNVKEEV
ACSKFDQEDELNKEEILLDDLLKSKYDGRTIQLPDFAIVYSFLELFGVFLELPYITMPEL
EHSLDSTKVFTGGEDSGVLESLHTKLFRKLSKSPRFSILSNFKPNKLSKTVLKFAQMAEL
PFAWDLEQFGYHILTCAQKLQLLKALCDIQFDENPRFKSILFEAYKADQGASLRLSPFGY
EQDGKTVWFHEDGEYNVQVYAGELEETDMWQVRAGNLDDLTEYISILKKLSEVNPKDVAA
EKLRLRNAAKQKEKEKRRLEREHQRQLLKEEKNDKKRGRKTKVIINTSESEEEDDGCCRC
LANNQSDLVLLCDGCDAAYHTLCLRPPVETIPEGDWFCPFCLQVKLIEALEVKLNELNAK
IKARERKSKRMVFYGINSANIVDKTSEDNATRRSGRGAKRIDYNFSEYDEMIKKAVNAKD
EKELLPCGRVSARNTKQKRQRRKLNDLDTDNEDDYDSGDNSFSNYDSDQRDDMKHFINDH
LDETEERHRNKHLRSSRRFKTRRKRLNIDDDDEGSNKSESDGFDSKIPKRRLRQRKVTRY
DETAFSSENEGSIKSINVEEGDEWIGDEPSSESESEDLNSEVSDSPKPRRTLRHRQVKNK
VNLCEDDSEEDDEDYDLSEESSIEVNSDKDKQVTDSKPVVQNLNEEQTHNKNGDEGQCRD
PIAQNTLADNGQVKPIEHSGIKSLDNVKVLKPSPTKKELNEGDSNTICMTFTVANTILSS
PVIQQANKPSAFCHPRERFNQVIKSKSPSGSPTKTSGNIQQQQPIIQPVPFLKTSTVPLH
PREIYNNLLKNKVTEMPNPSTQNTSSTFIHHSSPSTLCQSFSSASSLGCTTIQTLNQNSS
FNASFHNITSTQDMNPHSSRLQFNNIHGNYFSNSGYEPSYTQSQRFSSPGCLPPQQIGLQ
SHSYNHSTNSSLGFYPMRSTPYCPRQQEQYRPSPAFPNVHGSTGYPFMESVASSPNFYPP
YEYSDQVRPPVHVGVYPYSQYSGIQNVKQDRDIKKQLKEQAKQERELKKLEKLQEKERKK
QKKVSTVNHGMDGKSNMNFFRNMVISPDNNKGDDTHEQFQ
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaacagagttcattaaagattgtattgatttaaatgtaaatgaatcaagtaca
gaacttgttttaaattgtaagaataatctcgataaaattgaaaacatgtctaaatctgaa
gagaaaaaaaatgaaaaaccttgtgaacaaatatctgtgaaaaatgttaaggaagaggta
gcatgttcaaaatttgatcaagaagatgaattaaacaaagaagaaattttattagatgat
ttattaaaaagcaagtatgatggaagaacaattcagcttccagattttgcaattgtttat
tcatttttggagttgtttggagtatttttggagttaccatatataactatgcctgaatta
gagcattcattagactcaacaaaagttttcactggtggtgaagacagtggagtgttggaa
tccctacataccaaacttttccgcaaacttagcaaatctcctcgcttctcgattttatcc
aattttaaaccaaacaagttgtctaaaactgttttaaagtttgctcaaatggcagaactt
ccttttgcctgggatttagaacagtttggttatcatatactaacttgtgcacaaaaacta
caattacttaaggcgctatgtgatatacagttcgatgaaaacccaaggtttaaatcaatt
ttatttgaggcttataaagcagatcaaggcgcaagtcttcgtttgtctccttttggatac
gagcaagatggaaaaactgtatggtttcatgaggatggagaatataatgttcaagtttat
gctggggagctggaagagactgacatgtggcaagtgagagctgggaacttagatgatctc
acagaatatatatctatattaaagaagttatcagaagtaaaccctaaagatgtagctgca
gaaaagttacggctgcgtaatgctgctaaacaaaaggaaaaagaaaaacgtagattagag
cgggaacatcaaagacaattactaaaagaagaaaaaaatgataaaaaaagggggcgtaaa
acaaaagttattatcaatacatcagaatctgaggaagaggatgatggctgctgtcgatgt
ttagcaaacaatcaatcagatttggttttgctgtgcgacggttgcgatgcagcatatcat
acgttgtgtttacgtcctccggttgaaaccatacctgaaggagattggttctgtccattc
tgcttacaagttaaattaattgaggcactagaggtaaagctaaacgagttaaatgctaaa
attaaggcgcgggaaagaaaatctaaaagaatggtattttatggaataaattcggcaaat
attgtagataaaacaagcgaagacaacgcaactaggcgttctggtcgtggtgcaaaacgt
attgattataatttttctgaatacgacgagatgattaagaaagcggttaacgccaaagat
gaaaaagagttattaccgtgtggtcgagtgtccgcaagaaatacgaagcaaaagcgtcag
cggcgaaaactaaatgatctggacaccgacaatgaagatgattatgatagcggcgataat
tcatttagcaactacgacagtgatcaacgtgatgatatgaaacattttataaatgatcat
cttgatgaaacagaagaacgccacagaaataaacacttgagaagcagtcgacgctttaaa
acccgccggaaacgtttaaatattgatgacgatgacgaaggcagtaacaaaagtgaaagc
gacggttttgactctaaaatccctaaacggcgattacgtcagcgcaaagtgacgaggtac
gatgaaactgcgttttcaagtgaaaacgaaggctccataaaaagtattaatgtagaagaa
ggcgacgaatggatcggagatgagccatctagtgaatcagaaagcgaggatttgaatagc
gaagttagcgatagcccaaaaccaagacgtactttaagacatcgccaagtgaaaaacaaa
gttaatttatgtgaagatgatagtgaagaagatgacgaggattacgatttgagcgaagaa
agttcaattgaagttaactctgataaagataagcaagtcacagactctaaaccagtcgtt
caaaatttgaatgaggagcagactcataataaaaacggagatgaagggcagtgtcgagat
ccaattgctcaaaatacgcttgccgacaatggccaagtaaaaccaatagaacatagtggt
attaagtcgctggacaatgtaaaagttttaaaaccttcaccgactaaaaaggaattaaat
gaaggcgactcgaatactatttgtatgacttttactgtcgctaataccattttatcttct
ccagtaatacaacaggcaaacaaaccaagtgctttttgtcatcctcgagaacgttttaat
caagttatcaagtcgaaatctccttcaggttcacccacgaaaacatccggtaatattcag
caacagcaaccaataatacaaccggtaccgtttttgaaaacttccactgttcctttgcac
cctcgtgaaatatacaataatttattaaaaaacaaggtaacagaaatgccaaacccatct
acgcaaaataccagttcaacttttattcatcactcatcaccatctacgttatgtcaaagc
ttttcatcagctagcagtttaggttgcactaccatccaaactctaaatcaaaacagtagt
tttaatgcaagttttcataacattacttcaacacaagatatgaacccacactcttcacgg
ttacaatttaataacattcacggcaattatttttcaaattcaggttacgagccatcatac
actcaatctcaacgtttctcgtcgcctggttgtcttccaccccaacaaatagggctacaa
tctcatagctacaatcatagtacgaactcttcattaggattttatccaatgcgttctacg
ccttattgtccgcgtcagcaggaacagtatagaccatctccagcatttcctaatgtacac
ggttcaactgggtatccttttatggagtcagttgcttcatcgcctaatttttatcctcca
tacgagtattctgatcaagtccgacctcctgtgcacgtcggtgtttatccctactcgcaa
tatagcgggattcaaaatgtgaaacaagatcgagatataaaaaagcagttgaaagaacaa
gcaaaacaagaaagagaacttaaaaaattggaaaagttacaagaaaaagaaagaaaaaag
caaaagaaagtttctacggtcaaccacggaatggatgggaaatctaatatgaattttttt
cgaaatatggtcatttctcctgataataataaaggagatgatacacatgagcagttccaa
taa
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