Hydra vulgaris (swiftwater hydra): 101234472
Help
Entry
101234472 CDS
T01080
Name
(RefSeq) ATP-dependent RNA helicase DHX8 isoform X1
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101234472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hmg03041
]
101234472
Enzymes [BR:
hmg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101234472
Spliceosome [BR:
hmg03041
]
Complex C
Other components
Step II factors
101234472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
S1
WHD_HA2
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
AAA_30
Sigma54_activ_2
AAA_16
Cas3-like_C_2
T2SSE
PhoH
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
101234472
NCBI-ProteinID:
XP_047136778
LinkDB
All DBs
Position
7:complement(33308827..33408369)
Genome browser
AA seq
1227 aa
AA seq
DB search
MEELQQLEFLSLVSKVCTELENHLGMNDKTLAEFIIMLAGKSKTVESFKSRLEKNGAEFP
DSLISNLYRLIKALQPVTSSKKKAKKNVVDVEEDSKLVLRKKKFPGLCIPDEPVKKWELE
DEKVAASALDELEALFLKVSSPKNEKGRISESNNEENKKSSRHDRDDKKDSDDYDQRRKR
RFSDSDEEIYKKNSRHDRDDKKNSDDNDQRRKRRFSDSDEEIYKKNSRHDRDDKKDSDDY
DQRRKRRSHSPKRERKSDRRKDSNKIPESPEVGKIYDGKITNIMQFGCFVQLFGIRSRVE
GLVHISQLRKEGRVNDVKEVVTRGQNVKIKVLSIAGKKISLSMKDVDQATGEDLNPGQGI
RLPVNSEVPLRNPDRPSTTTAVPTYEESIDDNTRKKFKRISSPERWEIKQLISAGVLDKA
DYPDFDEETGILPKEDDEDDEVEIELVEEEPPFLQGQTKLTINVSPIKIVKNPDGTLPRA
AMMQSALAKERREIKQQEREAHTESIPKDIAKMWIDPVPQSSEGDKKSIFAQDMRGVLSQ
EVPEWKKATFGGKGGSYGRKTTMSIVEQRQSLPIYKLRDELVKAVSDNQILIVIGETGSG
KTTQITQYLAEEGYTTLGAIGCTQPRRVAAMSVAKRVSEEVGCRLGQEVGYTIRFEDCTS
PETKIKYMTDGMLLRECLLDGELSTYSLIMLDEAHERTIHTDVLFGLLKKAISKRKDLKL
IVTSATLDAVKFSTYFFEAPIFTIPGRTYPVEVLYTKEAETDYLDAALITVMQIHLTEPP
GDILVFLTGQEEIDTSCEILYERMKSLGPDVPELVILPVYSSLPSEVQTRIFDPAPPGSR
KVVIATNIAETSLTIDGIHYVVDPGFVKQNVYNSKSGIDQLVVTPISQAQAKQRAGRAGR
TGPGKCYRLYTERAYRDEMLSTNVPEIQRTNLASVILTLKAMGINDLISFDFMDPPPMET
LTTALEALHSLSALDDEGLLTRLGRRMAEFPLPPQLSKMLIQSVHLACSDEILSIVSMLS
VQNVFYRPKEKQAIADQKKAKFHQIEGDHMTLLAVYNAWKNSKFSNAWCFENFVQARSLK
RAQDVRKQLLGIMDRHKLDIVSCGKNTVRAQKAIVSGYFRNAAKKDPQEGYKTQTDNQAV
YIHPSSALFNRQPEWVVYHELVLTTKEYMREVTSVDPKWLVEFAPAFYKFADKNKLSKRK
REQRIEPLFNRYEEPNSWRISRAYRMR
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacttcaacagcttgaatttttgtctttggtatctaaagtttgtacggaactg
gagaaccatttaggaatgaatgataaaacacttgctgagtttatcatcatgcttgctggt
aaaagcaaaacagttgaaagttttaaaagtcgattagaaaaaaatggcgctgaatttcct
gattcattgatttcaaatttatatcgccttattaaagctttacagcctgttacctcatca
aagaagaaagcaaaaaaaaatgttgttgatgttgaagaggattccaagttagttctacgc
aagaaaaagtttcctggcttatgtatacctgatgaaccagtcaaaaaatgggagttagaa
gatgaaaaggttgcagcatcagctttagatgagttagaagcattgtttcttaaagtatct
tctccaaagaatgaaaaaggccggatttccgaatctaataatgaagaaaataaaaaaagt
tctcgacatgatagagatgataaaaaggactcggacgattatgaccaaagaagaaaacga
aggttctctgactctgatgaagaaatttataaaaaaaattctcgccatgatagagatgat
aaaaaaaactcagatgataatgaccaaagaagaaaacgaaggttctctgactctgatgaa
gaaatttataaaaaaaattctcgccatgatagagatgataaaaaggactcagatgattat
gaccaaagaagaaaacgaaggtcacactccccaaaaagagaaagaaaatcagacaggcgc
aaagatagtaataagattccagagtctcctgaagttggaaagatatatgatgggaaaatt
acaaacattatgcaatttggttgttttgttcaactttttggtattcgctcacgtgttgaa
ggtctggttcatatctcccagttgcgcaaagaaggaagagtaaatgatgttaaggaggtg
gttacaagaggtcagaatgtaaaaattaaagttctttctattgctggaaaaaagatcagt
ttatcaatgaaggatgttgatcaagctacaggtgaagacttaaaccctggtcagggtatt
cgtcttccagttaatagtgaagttccattaaggaatcctgatagaccttctactacaaca
gctgttccaacatatgaagaatcaatagatgataatacaagaaaaaagtttaaaaggatt
tcttctccagagcgatgggaaatcaagcaattaatatcagctggtgtgctagacaaggct
gattatccagattttgatgaagaaactggaattctaccaaaagaagacgatgaagatgat
gaagtggaaattgaattagtagaagaagagcctccatttttacaaggacaaactaaactt
acaatcaatgtcagtccaatcaaaattgttaaaaatcctgatggtacacttcctcgtgct
gcaatgatgcagtccgcactagcaaaagaaaggagagagataaaacaacaagaacgagag
gctcacacagaaagtattccaaaagatatcgcaaaaatgtggattgatcctgttccacaa
tcaagtgagggagataaaaaatcaatatttgcacaagacatgcgtggtgtactatctcag
gaagttcctgagtggaaaaaagctacatttggtggaaagggtggctcttatggcagaaaa
acaacaatgagcattgtggagcaacgtcaaagtctaccaatttataaacttagagatgag
ttagtcaaggctgtttctgacaaccaaatacttattgtgattggggaaactggatctgga
aagaccacccagataactcagtatcttgctgaagaaggttatactaccctaggtgctatt
ggttgtacacaaccacgtcgtgtagctgctatgtctgtggcaaaaagagtatctgaagaa
gttggttgcagacttggtcaggaagtaggatatacaattcgatttgaagattgtactagt
cctgaaaccaagataaaatacatgacagatggtatgttgttaagagaatgtctattagat
ggtgaactttcaacatattcattaataatgttggacgaggcacatgaacgaacaatacac
actgatgtcttgtttggacttttaaaaaaagctatttctaaacgcaaagacttaaaactt
atagttacctctgcaacattggatgcagttaaattttctacatacttttttgaagctcct
atttttactattcctggtcgtacttatcctgttgaagttttatatacaaaagaagctgag
actgattatcttgatgcagctttaatcactgttatgcagattcatttgacagaaccacca
ggagatattcttgtttttttaacaggtcaagaggagatagatacatcatgtgagattctt
tatgaacgaatgaagtctttaggccctgatgtaccagaacttgttattctacctgtgtat
tcatcgcttcctagtgaggtgcaaacaagaatatttgatcctgcacctcctggcagtaga
aaggttgttattgctacaaatatagctgaaacttctcttactatagatggtattcattat
gtggtagatccaggttttgtaaagcaaaatgtatacaattcaaaaagtggtattgatcag
ttagttgtcacaccaatatctcaagcgcaagctaaacaaagagctggtcgtgctggaaga
actggaccaggaaaatgttacaggttatatactgaaagagcatacagagatgaaatgctt
tcaactaatgttcctgaaattcagcgaacaaatcttgctagtgttatcctcactttaaaa
gctatggggattaatgatctcatttcttttgattttatggatcctccaccaatggagaca
ttgacaactgctttagaggctttgcattctttaagtgcacttgatgacgaaggcctttta
actcgactagggagacgaatggcagaatttcctttacctcctcagctttctaagatgctc
attcagtctgtacacttagcatgtagtgatgaaattctttctatagtatctatgttgtca
gttcaaaatgtgttctacaggccaaaggaaaagcaagcgattgctgatcaaaagaaagca
aaatttcatcaaattgaaggtgatcatatgacactgctggccgtatataatgcatggaag
aatagcaagttttctaatgcatggtgctttgaaaactttgttcaggcaagatctctaaag
cgtgcacaggatgttagaaaacagttgcttggtataatggacagacacaagcttgatata
gtatcgtgcggcaaaaatactgtaagggctcaaaaagctattgtcagtggttatttcaga
aatgctgctaaaaaagatcctcaagagggttacaaaacccaaactgataaccaggcagtt
tatatacatccttcaagtgctttatttaacaggcagccagaatgggttgtttatcacgaa
cttgttttgacaactaaagaatacatgagagaagtaacatcagttgatcctaaatggctt
gttgaattcgctcctgcattttacaagtttgctgataaaaacaagttaagtaaaagaaaa
cgcgaacaaaggattgaaccattgtttaacagatacgaggaacccaactcttggagaata
tcaagagcttacagaatgcgataa
DBGET
integrated database retrieval system
