Hydra vulgaris (swiftwater hydra): 101234692
Help
Entry
101234692 CDS
T01080
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9-like isoform X1
KO
K09191
general transcription factor IIIA
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hmg03000
]
101234692
03021 Transcription machinery [BR:
hmg03021
]
101234692
Transcription factors [BR:
hmg03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
101234692
Transcription machinery [BR:
hmg03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
101234692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
PRDM2_PR
zf-C2H2
zf-H2C2_5
SET
zf-C2H2_4
zf-C2HE
DUF6176
zf-C2H2_11
DUF5887
FOG1-like_PR
A2L_zn_ribbon
Motif
Other DBs
NCBI-GeneID:
101234692
NCBI-ProteinID:
XP_047143556
LinkDB
All DBs
Position
11:15089623..15153020
Genome browser
AA seq
626 aa
AA seq
DB search
MEIYDESVLTPYEIERQNNIISNYEFMKACGLPVKPLIYVKQNKVKLEEVYNYNSASDTS
ESNQEDEDWKSSKAKHKLSNCRVVPDFTRKVKSPKKFLELKKQLKKKTVKKTETTSFKRK
YERTFHPENLIRKRQRISKYEEIKNERYPKRGTRKNYKEADVPDEDHYLFCESCSEFFYG
DCPEHGSLLPLADKTVNYDEVQRSVATLPDGMVIKESLIPHAGLGVFAIENFDVGVRFGP
YQGKKIRPDIPKEDLDTSYMWEIMKDGNVLYYIDGKDERYSNWMRYINCSRIEAEQNLVA
FQYHGEIYYRVYKKVEKGKEFLVWYGDDYAKDLGIINSKKDIHQCKMCGVCFTAEIYLIS
HIRHCKIKNRNFGINKLKNGADIKITEENIKISEDNMENLVSCSNSKSKVNNNITTHVKI
CSGGKPFKCTYCHYECTQKTNLTTHLRIHTGEKPFKCTYCDYECTNKYNLVRHVKLHTGE
KPFKCTYCDYKCTQKTNLTTHLKIHTGEKPFKCTYCDYKCTQKSDLTKHLKIHTGEKPFK
CTYCDYECTQKTNLTTHLKIHTGEKPFKCTYCDYKCTQKSYLTKHLKIHTGEKPFKCTYC
DYECTQKTHLTTHLKIHTGEKLFKCI
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggaaatatacgatgaaagtgtgttaactccttatgaaattgaaaggcaaaacaacatc
ataagtaattatgagtttatgaaagcttgtggtttacctgttaagcccttgatttatgtc
aaacaaaacaaagtaaaattagaagaggtttacaattacaatagtgctagtgacacttct
gaaagtaatcaagaggatgaagattggaaaagttcaaaagcaaaacataaattatccaat
tgcagagttgtaccagattttacaagaaaagttaaaagtccaaagaagtttttagaatta
aaaaagcaattaaaaaaaaagactgtaaagaaaactgaaacaacttcattcaaacgaaaa
tatgaaagaacatttcaccctgaaaatttaatacgtaaaaggcaaagaataagtaaatat
gaagagattaaaaatgaaagatatccaaaacgaggaactaggaaaaactacaaagaggct
gatgttcctgacgaagatcattatttattttgtgaatcttgctcagaatttttttatggt
gactgtcctgaacatgggtcattacttccattagcagataaaactgtgaattatgatgaa
gttcaaaggtcggtcgctactcttcctgatgggatggttattaaagaaagtcttattcca
catgctggtctaggtgtttttgctattgaaaattttgatgttggtgtgaggtttggacct
tatcagggtaaaaagattcgtccagatattccaaaagaagatcttgatactagctacatg
tgggaaattatgaaagatggaaatgttttatactatattgatggaaaagatgaacggtat
agcaactggatgagatacataaattgttctcgtattgaagctgagcaaaatcttgttgct
tttcaatatcatggtgaaatttattatcgtgtttataaaaaggttgaaaaaggaaaagaa
tttcttgtttggtatggggatgactatgcaaaagaccttgggattattaactcaaaaaaa
gatattcatcaatgcaaaatgtgtggtgtctgttttactgcagaaatttatttgatttcg
cacataagacattgtaaaataaaaaataggaactttggtattaataaacttaaaaatgga
gctgacattaaaataacagaagaaaatattaaaatatctgaagacaacatggaaaattta
gttagttgttctaacagcaaaagtaaggtaaacaataatataacaacacatgtaaaaatt
tgctctggtgggaaaccattcaaatgcacttactgccattatgaatgcacacaaaaaact
aatttaacaacacatttaagaattcacactggtgagaaaccattcaaatgcacttactgc
gattatgaatgcacaaataaatataatttagtaagacacgttaaacttcacactggtgag
aaaccattcaaatgcacttactgcgattataaatgcacacaaaaaactaatttaacaaca
catttgaaaattcacactggtgagaaaccattcaaatgcacttactgcgattataaatgc
acacaaaaaagtgatttaacaaaacatttaaaaattcacactggtgagaaacctttcaaa
tgcacttactgcgattatgaatgcacacaaaaaactaatttaacaacacatttgaaaatt
cacactggtgagaaaccattcaaatgcacttactgcgattataaatgcacacaaaaaagt
tatttaacaaaacatttaaaaattcacactggtgagaaacctttcaaatgcacttactgc
gattatgaatgcacacaaaaaactcatttaacaacacatttgaaaattcacactggtgag
aaattgttcaaatgcatttaa
DBGET
integrated database retrieval system
