Hydra vulgaris (swiftwater hydra): 101235737
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Entry
101235737 CDS
T01080
Name
(RefSeq) F-box only protein 40 isoform X1
KO
K10307
F-box protein 30
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hmg04121
]
101235737
Ubiquitin system [BR:
hmg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
101235737
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box
F-box-like
Motif
Other DBs
NCBI-GeneID:
101235737
NCBI-ProteinID:
XP_012555288
UniProt:
A0A8B7DB79
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Position
15:5563463..5591887
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AA seq
487 aa
AA seq
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MGDSFKKIMNSEGIHLHCLTCYIKYCSKFSNCPIIQCKSECGLHYHSCKQKEHEFVCTKQ
LRPCINFVNGCPFKLNSISLMRHLEVCPASVLYCGFSWNRHPLFSKVREKWLPFKSLKTN
PVPMEGDLDIDLLILDQKQLNFEFKQRMRNGKKKIKEKFVQPSTLEVNTFSSNFKEILSL
YDNSFLTYDDLVLTHLPNFTANVLNTNISDGYYDTPTTGYRFSKKEYSASSSNLFVNVDY
SLNPDEIHSRLLVHNDLRVQKQTLSLNVVVETLPRFQIQYPMYSFTCSKLFRRDQYSSHC
LNIHTDIYPHLNDWMVQRCPLAAYGCPYSQIRLKPKGRKVCVSKVFGCFTSVEENLSIKS
TSDKKKEQIVFSILDLPEEVIEYLFTFLDSLSLNTIAKTCSSFRSVCYNMLDTRGIVVSC
WKKRSLSLIKSSSWVEDLNIRFFSTSCSEMRNWYFTDCSAIGNHMRECAFFNRPKYSNER
IHLTPPS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgggagatagttttaaaaagattatgaactcagaaggtattcacttgcattgtttgaca
tgctacatcaagtactgttcaaagttctccaactgcccaattatacagtgcaaatctgag
tgtggtcttcattatcatagttgtaaacaaaaggaacatgaatttgtttgtacaaagcaa
cttcgcccatgcattaattttgttaatggttgtccatttaaactaaatagcattagtctt
atgcgtcatttggaagtatgtcctgcaagtgtgttatattgtgggtttagttggaacaga
catcctttgttttctaaggtacgtgaaaaatggctaccttttaaatcattaaaaacaaac
cctgttccaatggaaggagatctagatattgatctattaattcttgaccaaaagcaattg
aattttgagtttaaacaacgaatgagaaatggtaaaaagaagattaaagaaaaatttgtg
cagccttctactctagaagtaaacacattctcgtcaaattttaaggagatcctttctctt
tatgacaatagctttttaacatatgacgatttagttttaacgcatttacctaactttact
gcaaatgttttaaatactaatatatctgatgggtactatgacacaccaactacaggttac
aggttctcaaaaaaagaatacagtgctagctcaagtaatttatttgttaatgttgattac
tcattaaacccagatgaaatacattctcgtttgctggttcataatgacttaagagttcaa
aaacaaaccctcagtttaaatgttgttgtggaaacattaccacgttttcaaatccaatat
ccaatgtacagttttacttgctcaaagttgtttcgtcgggatcaatattcttctcactgt
ttaaacatacatacagacatctatcctcatttgaacgattggatggttcagagatgtcct
cttgctgcatacggttgtccttactcacaaattagattgaaaccaaaagggagaaaagtt
tgtgtctctaaagtgtttggttgctttacatcagttgaagaaaacctaagtataaaaagt
acttcagataaaaaaaaagaacaaatagttttttcaatattggacttacctgaagaagta
attgaatacttgtttacttttcttgacagcctcagtttaaatactattgcaaaaacatgc
agttcatttagaagtgtttgctacaatatgttggataccagagggattgttgtatcttgt
tggaaaaaacgttcactctccttaataaaaagctcctcctgggtggaagatttaaatatt
cgttttttttccacgtcttgttctgagatgagaaactggtactttacagattgttctgct
attggaaaccatatgcgggagtgtgcgttttttaatcgtccaaaatattctaatgaaaga
attcatttaacgcctccgagttaa
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