Hydra vulgaris (swiftwater hydra): 101236086
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Entry
101236086 CDS
T01080
Name
(RefSeq) ribonuclease Z, mitochondrial
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hmg03016
]
101236086
Enzymes [BR:
hmg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
101236086
Transfer RNA biogenesis [BR:
hmg03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
101236086
Prokaryotic type
101236086
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B_4
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_6
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
101236086
NCBI-ProteinID:
XP_047144375
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All DBs
Position
11:complement(37582874..37612308)
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AA seq
738 aa
AA seq
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MSPQLRPSKNVIMQVLWTGIDSSVPSLYIFTDSKKYLFNCGEGMQRIFTSNKMLRFGRLD
TFFMTRHEWTHMGGLPGFGMTLRDMKRILSEQNQKHFINEAVKYDQKIKSTPEIMVHAPP
SMIDVITGAQTFMRFDNSGVNFKVESSFNKCFTDGEMTVFPILIESEKEENKSLSQAMSY
LCQLLPLPGKFLIKDALRLGVPKGPLFGALSRGESVTLPCGKVISPEQVMEPQVNGVTFF
VLDCPTELHIKSLQEGIKQYMKLKSSPHLVIHAASKSVCNSDFYKLFLQCFPPSTQHLYL
SECQQRLSSVFGPQHEMQMKLHQIHPIFFPLIELQVERSQVERNGLFNFSRIKLRDVMSS
IEYDNSQTISEIEINTIPVANNFKTENDFFNSAQLNKSNNIFERVSNLFRKRKSSSSSSD
EFLPPKKNDNQSFKEYPKVVFFGTGSSIPSKLRNVSSTLLFFSEDEAVLLDCGEECYGQL
FRHYGNKITHILRCIKIILISHMHADHHLGLFTLLDKMKLIEKDSVILVAPEIMMNWLNC
YKRIDLKSLNFISNEKLMRDGEVLFRNIHVQSVKVDHPGHAYGFVISKDRCKVTFSGDTL
PSNELIKAGEDSTILIHEATMEDDKAEEAFLKKHSTIGQAFVVAQKMKAKNLLLTHFSQR
YPKIPNLNDIKSSIPFVLAFDHMEVSMDMIDEFESILPQLNFLFSTDTQEIQEVHENAQV
KTQINAQNNIHEDTIKAS
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctcaacttcgaccaagtaaaaatgttatcatgcaagttttatggacaggcatt
gacagttctgtcccaagtctctatatatttacagattctaaaaagtatctgtttaattgt
ggggaaggcatgcagcgaatatttacaagcaacaaaatgttgcgatttggacgccttgat
acattttttatgactcgtcatgagtggacgcatatgggaggacttccaggatttggaatg
actttgagagatatgaaaagaattttatctgaacaaaatcaaaaacatttcatcaacgaa
gctgttaaatatgatcagaagataaaatcaactccagaaataatggtgcatgctccacct
agtatgatagatgtaattactggagcacaaacatttatgcggtttgacaattctggtgtg
aactttaaggttgaatcaagttttaataaatgtttcacagatggagaaatgacagtcttt
cctattcttattgaatctgaaaaagaagaaaataagagcctatcacaagctatgagctat
ctttgtcaattgcttccactacctggaaagtttctaattaaagatgcactgagacttggt
gtaccaaaaggtcccctttttggtgctttgtcacgtggagagagtgtaactttaccttgc
ggtaaagtgattagtcctgagcaagtaatggagccacaagtaaatggtgtaacttttttt
gttttggactgcccaactgaattacatataaaaagtctgcaggaaggtattaaacaatat
atgaaactcaaaagttctcctcatttagtaatccatgctgcttctaaatcagtttgcaac
tccgatttttataaattatttttgcaatgttttccaccatctacacaacatttatatcta
agtgaatgtcagcaaagactttcttctgtatttggtcctcaacatgagatgcaaatgaag
cttcatcaaatacatcctatattttttcctttaattgaattgcaggttgaaagaagtcaa
gtggaaagaaatgggttatttaatttttcaagaattaaattgcgagatgttatgtcttct
attgaatatgataactcacagacaattagtgaaatagaaataaatactattcccgtggct
aataatttcaagacagaaaatgatttttttaattctgcccagttgaataaatcaaataat
atcttcgaaagagtttcaaatttgtttagaaagcgcaaaagtagttctagttcttctgat
gagtttttgccacctaaaaaaaatgacaatcagtcttttaaggagtacccaaaagttgtt
ttttttggtacaggctcctcaataccttcaaagctacgcaatgtatcatcaacacttcta
ttttttagtgaagatgaagctgttttacttgattgtggtgaggaatgttatggccagttg
tttcgacattatggaaataaaatcacacatatattacgttgtattaaaattattcttatt
tctcatatgcatgctgaccatcatcttggtttgttcacattactagacaaaatgaagtta
attgaaaaggattctgtcattcttgttgctccagaaatcatgatgaattggctaaactgc
tataagcgcatagatttaaaatcattaaattttatatctaatgaaaaactaatgagagat
ggggaagtgcttttcagaaacattcatgttcagtctgtaaaagttgaccatcctggacat
gcctatggttttgttatttctaaagataggtgtaaagtaactttttctggagatactttg
ccttctaatgaacttattaaagcaggagaagacagtactatattaattcatgaagcaaca
atggaagatgataaagctgaagaagcttttttaaaaaaacacagtacaattggacaagcg
tttgtggttgcacaaaagatgaaggcgaaaaatcttcttttaactcatttcagtcaacgt
taccctaaaatacctaatttgaatgacattaaatccagtataccttttgtactagctttt
gaccatatggaggtatccatggatatgattgatgaattcgaaagtattcttccccaactc
aactttctattttcaaccgatactcaagaaattcaagaagttcatgaaaatgcacaagtt
aaaactcaaataaatgcacaaaataatatccatgaagatactataaaagcttcttag
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