Hydra vulgaris (swiftwater hydra): 101236626
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Entry
101236626 CDS
T01080
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hmg04040
]
101236626
Ion channels [BR:
hmg04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
101236626
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GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans_2
Ion_trans
Motif
Other DBs
NCBI-GeneID:
101236626
NCBI-ProteinID:
XP_047144551
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Position
12:complement(43699499..43764215)
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AA seq
1057 aa
AA seq
DB search
MICDPLVTPDNRKWEYYIGISLLFYFGGIILIFISKVVTSFLLYDRNKNSVNAEYEEEDV
TDLEQNLYLKLVEASGVLVSAQNLQGRILSVVSFIFNLGCVAIYISMSSDPIEHCISNDS
ALWKVEMILYFFFLFHLLIRFFAAQDKLTFWSTDLMTIVDILTMPTIFFQTVFNNQYWLG
LRFLRLTYLLKLGDILQILNVFKTGSSFEMIGLVGTFLTVWLTSAGVVHLIENTGDPWSP
ISYQNNVTLNYFKCTYFLLVTMSTVGYGDISCNTYLGKIFTMMFIGVGLGLFASYLPAIS
NYFASNTKYNKEFIPVPGKKFVIVCGYITHESVSSFLRDFLHLDRNDNNTMVVFLSPSHP
DVNIQTSLKKYESRTCYFIGTIYSSIDADRMQISKADAVIILCNKKCANPDEEDAANITR
VIAVKNYQERVRCIVQLIMNNNKVHLMNCPQWKKEYGDAIICINELKLGFMAQSCNAPGF
STLVGNLFGMRSNMVSEDIPENEQWKIAYMLGACNEIYCSYLSNSFVGMTFPQAVELCFE
KLKLLLIAIELKTKNGKEFVINPMDKNLKLNRNTRGFFLAQNNRDTERALRYCSLCHKDL
IDPDKMVKCKCRKNRVNVQPSDTRVEIDPLYLLEVTPEDEKKGAQALTDDFFSNGNRPKF
DQTGTFYWCESRPFSAAKMTLEEAASEKFYNHVVVLVLSTKYSPSLELHRLVLPLRASNI
IPTMLKKIVILGDGEFLHREWLNLENFPDVHIVAGSPFNRQDLRTINIHTADMCILLSPG
STDKYDMEHEALSDRKVISLTLNLKAMQFETYKGYEKRQASLGFIGDDSNTLSGSTMTFT
EINPDESSISAKPVKETNSLKLITELIYNTNAMFLDQDDMNIYDDEHFYLTQPYACGSIF
TVSVLDSLVSATYFNGDILTIVQNLVTGSVSSELDELMAEGISPSGSWETLEIAAVRNRC
RIAQVDLCDGPLAEYGQCGTFGDLFLYALRTYNIICLGLFRLRDIHRLRTKSTKRYVITF
PDFNFMLAPTDRVFVLMQFHALKKKRKSTFAKDSSFF
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgatttgtgatcccttggttacacctgataaccgaaaatgggaatattatattgggatt
tcattgcttttttattttggtggaataatattaatttttatttcaaaagttgttacatca
tttttgctgtatgatcgcaataaaaatagtgttaatgcagagtatgaagaagaggatgta
actgatttagagcaaaatttatatttaaagttggttgaagcatcaggtgttcttgtatct
gctcaaaatctacagggtagaattttgagtgttgtttccttcattttcaacctaggctgt
gtagccatatatatttcaatgtcttctgatccgatagaacattgcatttctaatgatagt
gctctctggaaagttgagatgattttatattttttctttcttttccaccttttgattagg
ttttttgctgcacaagacaaattaacattttggtctacagatttgatgacaattgttgat
atactaacaatgcctacaatattttttcagactgtgtttaataatcagtattggctagga
ttgcgcttcttgcgtctcacttatttgttgaagctgggtgatattttacagattctcaat
gttttcaaaactgggtcgtcttttgaaatgattggactggttggtacatttcttactgtt
tggctgacatctgcaggagtagtacatttgattgaaaatactggtgatccatggagtcca
atttcttaccaaaacaatgttactctaaactattttaaatgcacctattttttactggtt
actatgtctacagttggttatggtgatatctcatgtaatacataccttggaaagatattt
actatgatgtttattggtgttgggctgggtttgtttgcatcatacctgccagctatttca
aactattttgcttctaatactaagtacaataaagagtttataccagtaccaggaaaaaag
tttgtaattgtttgtggctacatcactcatgaaagtgtttcttcatttttacgagatttt
cttcatttagacagaaatgacaacaatactatggtagtatttttatcaccatcacatcct
gatgtaaatattcaaacatcacttaagaaatatgaatcacgaacatgttattttatcggt
actatttattcttctatagatgctgacagaatgcagataagcaaagctgatgctgtgata
atattatgcaataaaaagtgtgctaatccggatgaagaagatgcagccaatataacaaga
gttattgctgttaaaaattatcaggaacgtgtgcgttgtattgttcaattaataatgaat
aataataaagtgcatttaatgaattgtcctcaatggaaaaaagagtatggagatgcaatc
atttgcattaatgagttaaagcttggttttatggcacaatcttgcaatgcaccaggtttt
tcaacgttggttggaaatttatttggaatgcgaagtaatatggtttcagaagatattcca
gaaaatgagcaatggaaaatagcttatatgttaggcgcttgcaatgaaatatactgcagt
tatctttctaattcatttgttggtatgacttttcctcaggctgttgagctgtgttttgaa
aaattgaagttgctgctgattgcaattgaattaaagacaaaaaatggaaaagaatttgta
ataaatcccatggataaaaatttaaaactgaatagaaatacgcgtggtttctttttggct
caaaataaccgagatacagaaagagcacttcgatattgttcattatgtcacaaagatctt
attgatcctgacaaaatggtcaaatgtaaatgtagaaaaaatagagtaaatgtacagcct
tcagatacaagagttgagattgatccgctgtatttacttgaagtaactcctgaagatgaa
aagaagggtgcacaagctttaacagatgattttttttctaatggaaacagaccaaaattt
gatcaaactggaacattttattggtgtgaaagtcgaccattttctgcagccaaaatgaca
ttagaggaggcagcatctgagaagttttacaaccatgtagttgtcttggtcttatcaaca
aagtattctccatcattagagcttcatcgacttgtactacctttgcgtgcaagcaacata
ataccaacaatgcttaaaaagattgtcatactaggagatggtgaatttttacacagagag
tggttgaatttagagaactttccagatgttcatattgttgctggttcaccatttaaccga
caagatcttcgaactattaatattcatacagcagatatgtgtattttattgtctccagga
agcactgacaaatatgacatggaacacgaggcactctcagatagaaaagttatctcactc
actcttaatttaaaagctatgcagtttgaaacatataaaggctatgagaaaagacaggcc
tcgttagggttcattggagatgattctaatactttatccggaagtacaatgacctttaca
gaaataaaccctgatgagagttctatttcagcaaaacctgttaaagagaccaacagttta
aaactcatcacggagcttatttacaatacaaacgcgatgtttttggatcaagatgatatg
aatatttacgatgatgaacatttttacttaactcaaccttatgcatgtggttcaatattt
acagtttctgtacttgactcattggttagtgcgacatactttaatggcgatattttgact
attgttcaaaatcttgtaacaggaagtgtcagctcggaacttgatgaactcatggcagaa
ggaataagtccatctggatcgtgggaaaccttagaaattgctgctgttagaaataggtgt
cgcatagcacaagttgatctttgtgacggtccacttgctgaatacgggcaatgtggaacg
tttggcgatttgtttctatacgctttgcgcacttataacataatatgcttgggtttattc
cggctacgtgatatacatcgactgcgaacgaagagtacaaaaagatatgttattacgttt
cctgattttaattttatgcttgcaccaactgatcgcgtgtttgttttaatgcagttccac
gctttgaaaaaaaagagaaaaagtactttcgctaaagattcttcttttttttaa
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