Hydra vulgaris (swiftwater hydra): 101237032
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Entry
101237032 CDS
T01080
Name
(RefSeq) breast cancer type 2 susceptibility protein homolog isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03440
Homologous recombination
hmg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101237032
03460 Fanconi anemia pathway
101237032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hmg04121
]
101237032
03036 Chromosome and associated proteins [BR:
hmg03036
]
101237032
03400 DNA repair and recombination proteins [BR:
hmg03400
]
101237032
Ubiquitin system [BR:
hmg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
101237032
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
101237032
DNA repair and recombination proteins [BR:
hmg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
101237032
FA (Fanconi anemia) pathway
Downstream FA components
101237032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA2
BRCA-2_helical
BRCA-2_OB1
BRCA-2_OB3
BRCA2DBD_OB2
Motif
Other DBs
NCBI-GeneID:
101237032
NCBI-ProteinID:
XP_047126131
LinkDB
All DBs
Position
2:complement(45163464..45233705)
Genome browser
AA seq
2252 aa
AA seq
DB search
MEDDSCFLHLSPAVTSNNESDVIGGRSPKLCGILKTPNSFSSLNNKSITSLSLSSAKRVT
ISVEKQLDSRRRLRSYSPYGSIWSSNIKSYSRRRRRLNNLSLEALLDQDVLSQWCEDMAT
PPKCNQNIFSKNISNKESKKNVARVLFDVTNVDSLKASDSIISLNTEFDYPYISSSPTLF
QDMTKNKNCSLLDLDSNNSLYVSMEHDKENNWISSPTMVFEKEDKYRTNSPGTKYRTNTS
VSLTSLTHSINVEDSDKLNYKLKRKFSLNENLKKDILKIDNENCFLSPAVTTKQKKSQKI
SYEMKSRSQSTPIEKKKSQESQIKESLIKESLMNPFYNLNVSNPDIMLSQDFALTCFNQN
DESYIKKLEKHKRNESYLNLTNEIFSHSSNDRLLNNSINDEKQFLSPPMIGGFKSNSQFS
GIWNYSDFYETLTNKVDLITDFNESSPILHAKISANQSVYVNKTQSFENENVTPSSQELV
KREKYPCSVTIHKNNMAYSLDSSIKSICTDKNYIFVPPVIQSCTVVNQTIEQPCLNQTTL
LNNLVQNNNNNNISMQSGNSILVNNENLRTKKFSYPKHENRFQNTPQKENIGNKKVQKLG
LKKSVNYSRNSILPDGFINMDNLTQISADDINSQKFNNDTMSSSLDQNCPAKFSENINQD
AKKKQVINKIEVNLLRGLESFQPGFETKVEGSDKSLQEAKKLFQEESNNLVEDTLIEDFN
GFQTGFGKKVEVSKKSLQEAKKLFQEENNNIVEEALMKDFNGFQTGLGKKVEVSKKSLQE
AKKLFQEENNNIVEDALMKDFNGFQTGLGKKVEVSKKSLQEAKKLFQEENNNIVEEALMK
DFNGFQTGLGKKVEVSKKSLQEAKKLFQEENNNIVEDALMKDFNGFQTGLGKKVEVSKKS
LQEAKKLFQEENNNIVEDALMKDFNGFQTGLGKKVEVSKKSLQEAEKLFQEENNNIVEDA
LMKDFNGFQTGLGKKVEVSKKSLQEAEKLFQEENNNIVEDALMKDFNGFQTGLGKKVEVS
KKSLQEAEKLFQEENNNIVEDALMKDFNGFQTGLGKKVEVSKKSLQEAEKLFQEENNNIV
EDALMKDFNGFQTGLGKKVEISKKSLQEAKKLFHEESNNIVEDTLIEDFNGFQTGLGKKV
EISKKSLQEAKKLFQEENKNIVEDALMKDFNGFQTGLGKKVEISKKSLQEAKKLFQEENN
NIVEDALMKDFNGFQTGLGKKVEVSKESLQEAKMLFEEENKKLLKDKPIKVSMFESFQTD
LQANQEVNVFKKSSRSANELLPEHRNGVESSPVNSHQVKKLAFLKEHSTLGKNCSINQSF
SSKMDQTKTSFKKNDSVMINNLNCDNVAYQHSVAIASRNSTPSLSSTSCNKFSKDHELLT
KNNIKHDVSKLRKRKIVFSSCDAYEYDRDAKFILPLPAVITSPDDIFDNCNTTSFDETLK
PLKSSFTTPFKMNTTPAQNISSFKKESERKSFCPFQKKRKQGFQTETDLIYQKQIGKLYQ
SKKSCKLLGVFVNYCLPRLPRKFLREELHSFGIKDQLINLNPSNALMFQFYAGNYFSESV
LQSKQAVVGDGVKLHFNEEMMITVNEFKQALLNCSSVDKNLINSTWIENHYKWIVWKLAS
YERMYPEQNAGICLTPSNVMYQLKYRYDKEVEFSERSCLKCICERDDVSSRRIILCVSFC
GPDDQTLEDGKFIWVTDGWYEIKASLDYQLSKFVEQGKIDVGTKLCIYGAELIGSEKACP
PLEISQSTMLKLSANSTRRARWHAKLGYQREKVAFPVPLKSLYTDGGLVGCVKVLILRKY
PMQWMEKVGGRCLFRNFFAEEQVKKRYEEERSIKMEQLYVKLKKELEMKKDKKDVKKKKN
FNIKLLNCGKDIFEAIDGAADPAALEQLLSDSQKNLVIKYKQNLTEQFQSELKKRFEEEW
KNSEFQERSTVQLQRFRVQCMCNTNQNTILSVWKPTNDINELWNEGVKLSIYNLSCTKNR
YKHIKTQVQLSTTHTSKYFVHENEANLNFHSRKAYSIADLCRMNKIPYNEVDIVGFAVKI
EPENCMLGVDQTVYLCDDLSKQFLIVKFHGGLKAYSVENIVKESHLVSFSSLTWDHNDKS
YPAKNVFCIYSDLSNVSCNVNPPYMSKAVKRCKDFIELHPSFLCELRTYLDNHSKTANST
NFTLGNLTPKSNFQNKNITMDMTTPVLPTEKLSHRHRLQMKKRLSLECYREPKPLSVLQA
NDRNVLTAEFKPPSVKTKTPVQGHPEFSSKTC
NT seq
6759 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgatagttgttttttacatttgtctccagctgttacatcaaacaatgaatca
gatgtaattggaggtcgttctccaaaactttgtggaatcctcaagacacctaattcattc
tcatccctaaataacaaatcaattacttctctttcgttaagttctgcaaagagagtcaca
ataagtgttgaaaaacagttggattctcgtcgaagattgaggtcatactctccatatggt
tcaatctggtcttcaaatataaagtcttactcgcgtagaagacgtaggttaaataacctt
tcattggaagcattacttgatcaagatgtgttgtcgcaatggtgtgaagatatggcaaca
ccaccaaaatgtaatcaaaatatcttttccaagaatataagtaataaagaaagtaaaaag
aatgtggcaagagttttgtttgatgtcacaaatgtcgatagtttaaaagcatctgactcg
attataagtctaaacacagaatttgactatccatatatatcatcatctccaacactgttt
caagacatgacaaaaaataaaaattgttccctacttgatttagatagtaataattcttta
tacgtgtcaatggagcatgacaaagaaaacaactggatttcttccccaacaatggttttt
gaaaaggaggataaatataggacaaatagtcctgggacaaaatataggacaaatacatca
gtttctttaacatctttaactcattcaataaatgtcgaagatagtgacaaattaaattat
aaattaaaaagaaaattttctttaaacgaaaacttaaaaaaggatatactaaaaattgat
aatgaaaattgctttctgtcacctgcagttacaaccaagcaaaaaaaatctcagaaaatc
tcttatgaaatgaaaagtagatcccagtctactccaattgaaaaaaaaaaatctcaagaa
tctcaaattaaagaatctctaattaaagaatctctaatgaatcctttttataacctgaac
gtcagtaatcccgatattatgttgtctcaggactttgctctgacttgttttaatcaaaat
gatgaaagttatatcaaaaagcttgaaaaacataaaagaaacgaatcttatttaaatttg
accaatgaaatatttagtcactcttctaatgatagattgttgaacaattcaataaatgat
gaaaaacaatttttatcccctccaatgattggtggttttaaatctaattctcagttttca
ggaatctggaattactctgatttttatgaaacacttacgaacaaagttgatttaattaca
gattttaatgagtcgagcccaattcttcacgctaaaatttcagccaaccagagtgtttat
gttaataaaactcaatcttttgaaaatgaaaatgtaactcccagttcacaagaacttgta
aaaagagaaaaatatccatgctcagtgactattcataaaaataatatggcatactcttta
gattcctccattaaatcaatttgtacagacaaaaattacatttttgtaccaccagtaata
caatcttgcacagttgttaaccagacaatagaacagccttgcttaaatcaaacaacatta
cttaacaacttggtacaaaataataataataataacatctcaatgcagagtggtaattct
atcttggtaaataatgagaatttgagaacaaaaaagttttcatatccaaaacatgaaaac
agatttcaaaacactccacaaaaagaaaatataggcaataaaaaagtgcagaaattggga
cttaaaaaatctgttaattatagcagaaattcaatattgccagatggatttataaatatg
gataatcttactcaaatttctgctgacgacattaacagccagaaattcaataatgataca
atgtctagttctttagaccagaattgtcctgctaaattttcagaaaatataaaccaagat
gcaaaaaaaaaacaagttattaacaaaattgaagtcaatttattaagaggtttagagagt
tttcaacctggttttgaaacaaaagttgaaggttctgataagtcacttcaggaagctaaa
aagttgtttcaagaagaaagtaataacttagttgaagacactttaatagaagattttaat
ggttttcaaactggttttggtaaaaaagtggaagtttctaaaaagtcacttcaagaagct
aaaaagttgtttcaagaagaaaataacaacatagttgaagaagctttgatgaaagatttt
aatggttttcaaactggtcttggtaaaaaagtggaagtttctaaaaagtcacttcaagaa
gctaaaaagttgtttcaagaagaaaataacaacatagttgaagatgctttgatgaaagat
tttaatggttttcaaactggtcttggtaaaaaagtggaagtttctaaaaagtcacttcaa
gaagctaaaaagttgtttcaagaagaaaataacaacatagttgaagaagctttgatgaaa
gattttaatggttttcaaactggtcttggtaaaaaagtggaagtttctaaaaagtcactt
caagaagctaaaaagttgtttcaagaagaaaataacaacatagttgaagatgctttgatg
aaagattttaatggttttcaaactggtcttggtaaaaaagtggaagtttctaaaaagtca
cttcaagaagctaaaaagttgtttcaagaagaaaataataacatagttgaagatgctttg
atgaaagattttaatgggtttcaaactggtcttggtaaaaaagtggaagtttctaaaaag
tcacttcaagaagctgaaaagttgtttcaagaagaaaataacaacatagttgaagatgct
ttgatgaaagattttaatgggtttcaaactggtcttggtaaaaaagtggaagtttctaaa
aagtcacttcaagaagctgaaaagttgtttcaagaagaaaataacaacatagttgaagat
gctttgatgaaagattttaatgggtttcaaactggtcttggtaaaaaagtggaagtttct
aaaaagtcacttcaagaagctgaaaagttgtttcaagaagaaaataacaacatagttgaa
gatgctttgatgaaagattttaatgggtttcaaactggtcttggtaaaaaagtggaagtt
tctaaaaagtcacttcaagaagctgaaaagttgtttcaagaagaaaataacaacatagtt
gaagatgctttgatgaaagattttaatgggtttcaaactggtcttggtaaaaaagtggaa
atttctaaaaagtcacttcaagaagctaaaaagttgtttcatgaagaaagtaataacata
gttgaagacactttaatagaagattttaatggttttcaaactggtcttggtaaaaaagtg
gaaatttctaaaaagtcacttcaagaagctaaaaagttgtttcaagaagaaaataaaaac
atagttgaagatgctttgatgaaagattttaatgggtttcaaactggtcttggtaaaaaa
gtggaaatttctaaaaagtcacttcaagaagctaaaaagttgtttcaagaagaaaataac
aacatagttgaagatgctttgatgaaagattttaatgggtttcaaactggtcttggtaaa
aaagtggaagtttctaaagagtcacttcaagaagctaaaatgttgtttgaagaagaaaat
aaaaaattattaaaagataaaccaataaaagtttcaatgtttgaaagttttcaaaccgat
ctccaagccaatcaagaagtaaatgtttttaaaaagtctagtcgatcagcaaatgaactc
ttgccagaacatagaaatggtgtagaaagcagtccagtaaattctcaccaagttaaaaaa
ttagcatttttaaaagagcatagtactttaggtaaaaactgttcaataaatcaatcattt
agttcaaaaatggatcaaactaaaacctcttttaaaaaaaatgatagtgtaatgataaac
aatctaaattgtgacaacgttgcataccaacattctgttgctatagcgtcaagaaattca
acaccttctttgtcttcaacatcatgcaataaattttcaaaggatcatgagcttttaacc
aaaaacaacataaaacatgatgtgtcaaaactacgaaagagaaagattgtgttttcttca
tgtgatgcttatgaatatgatcgagatgctaaattcatacttccattaccagctgtaatc
acatcaccagatgatatttttgacaattgcaatactactagctttgatgaaactttaaaa
ccattgaaaagttcatttacaacaccttttaaaatgaacaccacacctgctcaaaatatt
tcttcatttaaaaaggaatccgaaagaaaatctttttgcccttttcagaagaagagaaaa
caaggatttcaaactgaaactgaccttatttatcagaagcaaattggaaaactttatcaa
tctaaaaaaagttgtaaattgttgggagtgtttgtcaactattgtctacctcgcctacct
cgtaagttcttaagagaagaattacattcttttggaattaaagatcaactgattaatctc
aatccttcaaacgccttgatgtttcagttttatgctggaaattattttagtgagtctgtg
ttacaatcaaagcaagcagttgttggtgatggtgtgaaattacattttaatgaagaaatg
atgatcactgtaaatgaatttaaacaagcattactgaactgctctagtgttgataaaaat
ctaattaacagtacttggatagaaaatcactataaatggattgtttggaagttagcaagt
tatgaaagaatgtatcctgagcaaaatgctggaatatgtttaaccccctcaaatgttatg
tatcaattgaaatacagatatgacaaagaagttgaattttcagaacgctcttgtttgaaa
tgcatttgtgagcgagatgatgtttcgtcaagaagaatcatactctgtgtcagtttctgt
ggaccagatgatcaaacattagaagatggaaaatttatctgggttacagatggctggtat
gaaattaaggcatcattagactatcaactatcaaagtttgtagaacagggcaaaattgat
gttggtacaaagctgtgcatctacggtgctgagctgattggttcagaaaaagcttgtcct
cctcttgagatatctcaatctactatgctaaagttatctgctaattctacccgaagagca
cgatggcatgcaaagttaggatatcaaagagagaaagtagcatttccagtgcccttgaaa
tctttatatacagatggtggattagttggttgtgtcaaagtgcttattttacgaaaatat
ccaatgcagtggatggaaaaagtgggaggtagatgcttgtttaggaacttttttgctgaa
gagcaagtgaagaaaaggtatgaggaggaaagaagtatcaaaatggagcagctctatgta
aaactaaaaaaagaattagagatgaaaaaagataaaaaagatgtaaagaaaaaaaagaat
ttcaacattaagttactgaattgtgggaaagatatttttgaagcaattgatggtgcagct
gatcctgctgcacttgagcaattgttgagtgatagccaaaaaaacctggttattaaatac
aaacaaaacttaacagaacagttccaaagtgagttaaagaagagatttgaagaagaatgg
aaaaacagtgagtttcaagagaggtcaactgtacaattacaacggtttcgtgtgcaatgc
atgtgcaatacaaaccaaaatacaatcttaagtgtgtggaaaccaacaaatgatattaat
gagctttggaatgaaggagttaaactttctatatataacttgagttgtacaaaaaatagg
tataagcacataaagactcaagttcagctatctactacacacacatcgaaatattttgta
cacgagaacgaagcaaatctaaattttcattcaagaaaggcatacagtatagctgattta
tgcagaatgaataaaataccttacaatgaagttgatattgtaggctttgctgtaaagatt
gaacctgaaaactgtatgcttggagttgaccaaacagtttatctttgtgatgatttgtca
aaacaatttcttatagtcaaatttcatggtggtttaaaggcttattcagtggaaaacatt
gttaaagaaagtcacttggtttctttttcaagtttaacttgggatcataatgataagtca
tatcctgcaaaaaatgttttttgtatttattcagacttgtcaaatgtatcttgtaatgta
aatcccccttacatgagcaaggcagtaaaaagatgcaaagactttattgaacttcatcct
tcatttctttgtgaattgcgaacttacctagataaccattcgaaaacagctaactctaca
aactttactctgggtaacttaactccgaaatctaattttcaaaataagaacattaccatg
gatatgactactccggtcctgcctacagagaaacttagtcatcgtcatcgacttcaaatg
aagaagcgattatcgcttgaatgttatcgagaaccaaaaccactttctgttttacaagca
aatgatcgcaatgttttgacggcggaatttaagccgccaagtgttaaaacaaaaactcca
gtacaaggtcatcctgaatttagttcaaaaacttgctaa
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integrated database retrieval system
