Hydra vulgaris (swiftwater hydra): 101237216
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Entry
101237216 CDS
T01080
Symbol
LOC101237216
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg04080
Neuroactive ligand-receptor interaction
hmg04082
Neuroactive ligand signaling
hmg04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
101237216 (LOC101237216)
04082 Neuroactive ligand signaling
101237216 (LOC101237216)
04519 Cadherin signaling
101237216 (LOC101237216)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hmg04040
]
101237216 (LOC101237216)
Ion channels [BR:
hmg04040
]
Ligand-gated channels
GABA-A
101237216 (LOC101237216)
SSDB
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Flu_PB2_3rd
Motif
Other DBs
NCBI-GeneID:
101237216
NCBI-ProteinID:
XP_012558541
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All DBs
Position
01:8697549..8733672
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AA seq
472 aa
AA seq
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MAFKNLWQKLLKSFYNNQGLGPIRFDFNQNLGDKKVSEAWSKIKQAYNPLLRPNFTGNVT
DVIVSLTILQFDSVNDKDKSFKTDMYFRQRWVDYRAQHNLTTVLTPGFGKNHPSAFIWVP
DTVFRVMTGGYIHSNSTASHKVDIYPNGTVSWGCRVTLVSHCTFDLHNYPMDTQRCEIGV
LSFAHDKTHINYVWIEDNPVSLILNHLPQHSVHIENATNLSEYYSFSSNKEGEYSIIKFD
VIFERRFQAYIFQAFFPSASLVMVSWVSFWLHVNCVSARLGIGIVSLLTTYRLWEVVINA
MPKINYTTALDIYMLGCTTFICLSLLEYGLATNIHFTLWKEQKANYTWQTIKKKQETRKS
IDFTNVTNLRTKNALNQMKQIYDTKQINDTDLVLFDNHGRVQSIRKTSIREQKLKLKEEY
LSMWKSDPLGNRPYYFEPMMVTGKPASLDIVSRFLFPFGFLCFNIIYWASFL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggctttcaaaaacttatggcaaaaactattgaaaagtttttataataatcagggcttg
ggaccaatcagatttgattttaatcaaaatttaggggataagaaagtatcagaggcatgg
tctaaaataaaacaagcatacaatcctttattgcgtcctaacttcacaggaaatgtgaca
gatgtaatagtttccttaacaattttgcaattcgacagcgttaatgataaagataagagc
tttaaaacagacatgtattttcgacagagatgggttgactaccgagcacagcataattta
actactgttttaacaccagggtttggaaaaaatcacccttcagcatttatttgggtgcca
gatactgtgtttcgtgtaatgacaggtggatatatacactcaaattcaaccgctagtcat
aaggttgacatttatcctaatggaactgtttcttggggatgcagagtcacattagtgtca
cactgtacttttgatcttcataactatcctatggacactcaacgatgtgaaataggagtt
ttaagttttgctcatgacaaaacacatatcaactatgtctggatcgaagacaatcctgtt
tcgttaattctaaaccatcttcctcaacactcagttcatattgaaaatgctacaaattta
tcagagtactacagcttctcgtcaaataaagaaggtgaatactcaataataaagtttgat
gttatctttgaaagaagatttcaagcatatatatttcaagctttttttccatctgcttct
ctcgtaatggtgtcgtgggtatctttttggcttcatgtaaactgtgtatcagcacgttta
ggtattggaattgtgagtcttcttacaacttatagactctgggaagttgttataaatgct
atgccaaaaattaattatacaacagcacttgatatctacatgttaggttgcacaaccttt
atttgtttgtcattattggagtatggtctggctactaatattcattttacactttggaag
gaacaaaaagcaaattatacttggcaaactataaagaaaaaacaagaaacaagaaaaagc
attgactttacaaatgttacgaatctgaggacaaagaatgctttaaatcaaatgaaacag
atttacgatacgaaacagattaacgatacagacctcgttttatttgataatcatggaaga
gttcaaagtataagaaaaacttcaatacgagagcaaaagttaaagttgaaagaagaatat
ttaagtatgtggaaaagtgacccactagggaatcgcccttattattttgaaccaatgatg
gtgactggtaaaccggcgtctcttgatatagttagtcggtttttgtttccatttggattt
ctatgctttaatattatttattgggcgtcttttctataa
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