Hydra vulgaris (swiftwater hydra): 101237408
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Entry
101237408 CDS
T01080
Name
(RefSeq) piRNA biogenesis protein EXD1
KO
K18740
exonuclease 3'-5' domain-containing protein 1
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmg03019
]
101237408
Messenger RNA biogenesis [BR:
hmg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
101237408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
SM-ATX
LSM14
LSM12_LSM
Motif
Other DBs
NCBI-GeneID:
101237408
NCBI-ProteinID:
XP_047124168
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Position
2:21477261..21509793
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AA seq
685 aa
AA seq
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MDMHIGALIQITTINDEVYEGVVQTISIDEKKIIIKKAKNCNTGEVYEREVHLFGDQITD
LKIIQNPAEKEKKAEGKKQPSKLSNLSNEFNNIKVEQTLSSINQTDISQKKDVLLDTSDN
GSSLTQINHINPSAYLSGFEKVQKAKLTEPPLAVLLNSLNNEFNAVMTKLNNQKVLSIIA
EGQAVNRFGHISLLTVASREMVYIIDLEAFDGFPNSLKDLIENANVLKVVHDVRMTSDCL
YHIYGICPKNIFDTQVADAFIKRQMFGEFPDEVTSLAKCVETYLGICPCTFETDKSSIIQ
KTRNIWEKRPLHKDFLSVCAEACMYLRELRPIMMEKLLIEFLYGVDIYLDVARNMSDNQI
KLVNSKKLPREFSHISYLKQNRSKRFVKHSKQHYKDKTSDTPAENVRSGWDDGVNFHDKY
QEKHGSIVECLDNTSSPLIDPTKPVLKRKDEENSPKETARILDATRNFYDKDENERFNIG
VNSSVHQTFSNGNFEDLSVFQFSKYNQVNLNALDDNTMSSTSDSNDDFFSSKVGKPLSKR
HTHTLTNSGKTMLRNLLRPVKNENSNPKEFQQHATNSNKNGSFKNHTEKTMSSSKNISST
YNNTASFKNEEIKTPIVKKSFGRGQYLALMSELFEKNPSRNEPKTFGEMGVFEFPSDDEL
LDTPHVAPMVASLPALSKSVSVLKK
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggatatgcacataggagcactcatacaaattacaacaatcaatgatgaagtttatgaa
ggtgttgttcaaaccatttcaattgatgaaaaaaaaattatcattaaaaaagctaaaaat
tgcaatactggagaagtctatgaaagagaagtacacctatttggtgatcaaattactgat
ttaaaaattattcaaaatcctgcagaaaaagaaaaaaaagctgaggggaaaaagcaacca
tcaaaattgtcaaatctttctaatgaatttaataatataaaagtggagcaaaccttgtca
agtataaatcagacagatatttctcaaaaaaaagatgtcttacttgacacaagtgataat
ggatcttcgcttactcagattaatcatatcaatccatctgcttatctcagcggttttgaa
aaagtacaaaaagccaagctcacagaaccaccattggctgtacttcttaattctctaaat
aatgaatttaatgcagtgatgacaaagttgaacaatcaaaaggttttatcgattattgca
gaagggcaagctgtaaaccgttttgggcatatttctttactaactgtggccagcagagaa
atggtttatataatagacttagaagcatttgatggttttcctaactccttaaaagatcta
attgagaatgctaatgttttaaaggttgttcacgatgtacgcatgacaagtgactgcctt
tatcatatttatggcatttgtccaaaaaatatatttgatactcaggtagctgatgcattt
ataaaaagacaaatgtttggtgagtttcctgatgaagtaacatcacttgcaaaatgtgta
gaaacttatcttggtatttgtccttgtacatttgaaactgataaatcaagtataatacag
aaaacaagaaatatttgggaaaaaagaccacttcataaagattttttatctgtttgcgcc
gaagcatgtatgtacttaagagaacttcggcctattatgatggaaaagttattaattgaa
ttcttatatggagtcgatatatatctggatgttgcaaggaacatgagtgataatcaaatt
aaattggttaactcaaagaaattacctcgtgagttctctcatatttcatatttaaaacag
aatcgctccaaacggtttgtaaagcatagtaaacagcattataaggataaaacctctgat
actcctgcagaaaatgtaagaagcggttgggatgacggcgtaaactttcatgataagtac
caagaaaagcatggttcaattgtggaatgcttagacaacacaagttctcccttaattgat
ccaactaagccagtgttaaaacggaaagacgaagaaaacagtcctaaagaaactgcgcgt
atactcgatgcgactagaaatttttatgataaagatgaaaacgaaagattcaatattgga
gttaacagttccgttcatcagacttttagtaatggtaattttgaggatttatctgttttt
caattctcgaaatataaccaagtaaatttaaatgcattggatgataatacgatgtcatca
acctctgattcaaatgacgattttttctcttcaaaagtaggaaagcctttaagtaaaagg
catacccatacattgacgaattctggaaaaactatgttgcgtaatttattacgacctgtt
aagaatgaaaattctaaccctaaagagtttcaacaacacgcaacaaattcgaataaaaat
ggttcatttaaaaatcatactgaaaaaacgatgtcatctagtaaaaacataagttcgacg
tataataatactgcttcatttaagaatgaagaaataaaaactccgattgtaaaaaaatct
ttcgggcgcgggcaatatttagccttaatgtcagaattatttgagaaaaatccgtcaaga
aatgaacccaaaacatttggcgaaatgggagtatttgagtttccttctgatgatgaactg
ctagacacgcctcatgttgcacctatggttgctagtttgccagctttgtctaaaagtgta
agtgtgctaaaaaaatga
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