Hydra vulgaris (swiftwater hydra): 101237827
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Entry
101237827 CDS
T01080
Name
(RefSeq) uncharacterized protein LOC101237827 isoform X1
KO
K20191
Hermansky-Pudlak syndrome 5 protein
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hmg04131
]
101237827
Membrane trafficking [BR:
hmg04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
101237827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_HPS5
TPR_HPS5
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_IFT140_1st
Beta-prop_VPS8
ANAPC4_WD40
Beta-prop_THOC3
WD40_Prp19
zf-RING_Vps41
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
zf_RING_Vps8_fungal
zf_RING_Vps8
zf-RING_11
WD40
Reb1_MybAD
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
101237827
NCBI-ProteinID:
XP_012553622
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Position
6:21782381..21842036
Genome browser
AA seq
1342 aa
AA seq
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MANDHILSSFNPLSKIQTFMKKTTKVQYGCVEISSSFICIGASTGTTYMFDRQTSELKHF
ITNKASAIVHLKFSSDGKILAVADSSGLITLWEIPFEIHSGDHLIHSGDHLNQEIKVFRE
IKELVGEKISELCWHENLKLFIGTQSGTVASFNVGSNVFVSKFEILMKSGSHIVQLDVSS
GNLLISSTTKALIYSLDSGQFCQIGKKARTGLYGCCFLNSSEVIIYSARPGSRLWEVDTS
GQVLSTHQFKELLNIPPTPIITSSAVKLSESNCSSTSRLSFNFPYLYQVMNKYLLTWSAD
GIFLFEPHKRKVFAWNDQIKDVISMTSFGSSIFVLHSQCIVTEIQLLSLKDFLKTFHDLE
EWEKVAEVACKCKEKILQNVETFISIDFYKAQNQLEMEKLPSKFLQEFQNFVKDFEQKHV
QICTEIEKKMNQNISECNQEDYGDIQSTNDDIQSTNDDIQSTKSTNDDILSTKSSNSRIS
TSKFDSFMEKATNKIVKKVVASGFMKKVIYDALENEGVHINKSLHENIKKTKSVPSSPTQ
SRSNISESSIKYEEKTLNKMYNQLPEHHSMPNIFSNTDTNDIVYHRMQKKSKKKKSSQNC
NKRSTDFTDSSSTENTSSETSMNLSSESVTCDTGESINGNFITPSFRFEIETEPPIFLLK
LPNNYFQIISKLLSVTANTSNNFRDTKILYNINNVKKVLNHWSKELSSVTVEFQEEVFKL
LNESIKNALSDIILSFIDIESRFLLFKQLSAGYSEISNVAMLCLQTSIFPEKCKMPHNYE
FALLSFALDFDTMRKSAQQEAKEIINKKNDLIDSEMADENQKNAVLKEISSSTDIRSTMN
TYESLCLRMLVSSGNDSAFEKKCFFGENKDNENISLCEGFSSDNMTECVSCILDKCRACF
ILRYFPILNFERMYSLLLWKGGCRWRSWCACMVHLKELYKHSNLSKAIAKNQLSVEELLS
STVEDFLGNISRLYIVAPHLVSLYIKEGQFTNWEVSLLYNTGYLKDASNDFLLYAENTFL
SLSMHKLHLLFLLCCLTNSLNSQPSILDLFCTCGKPRPRANSIEWKYQKILVSLFDYLEE
LKKDTQTFLLLQGMSNLCLKRGYWTGCIKLLVWLNKINDAVTLLVQLQDEEIFIWVTKSG
CLNLDLWSNLLYECSNQSDVEKHNCEVLDGLHSTLNLDKVVRSAAIEIGCFAVLEIINKF
CISVSLDLYTSLLQALSHENQQKIVVEKILQVANDKVWTDKINNVHSKLENVKNKELIGI
ESTFTGEFTADFIINESDSMWGRNINLSDTTCPLCTLPLCIKTSSTLNGGLILFPCGHIF
HKICLPELACLICFYKRFTSLS
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgaccatatcctatcatcgtttaatcctctttcaaagatccagacttttatg
aaaaaaactactaaagttcagtatggttgtgttgagatatcaagtagtttcatctgcatt
ggtgcaagtactggaacaacttacatgtttgatagacaaacttctgagctcaaacatttt
atcaccaacaaagcttcagcaatcgtccatttaaaattttcttctgatggaaaaatctta
gctgttgctgacagctcaggcttaattacactttgggaaattccattcgaaatacattct
ggagatcatttaatacattctggagatcatttaaatcaagaaattaaagtttttagagaa
ataaaggaactcgtaggtgaaaaaatttctgaactttgttggcatgaaaatttaaagtta
tttatcgggactcaatctggtacagttgcatcttttaatgtaggctcaaacgtatttgta
tcaaaatttgaaatattgatgaaatctggaagtcacatagtacaattggatgtatcatct
ggtaatcttcttatttcatccacaacaaaagctttgatatactctttggatagtggtcag
ttttgtcaaataggaaaaaaggcacgaactggactttatggctgctgtttcctaaacagt
tctgaagttatcatatattctgcaagacctgggagtcgactttgggaggttgatacttct
gggcaggttttgtctacacatcaatttaaagaattgttaaatatacctcctactccaatt
attacatcaagcgctgttaaattgtcagaatcaaattgttcttcaacaagccgtctgagt
ttcaactttccttatctctatcaagttatgaataaatatctactaacctggtctgctgat
ggaatttttttgtttgaacctcacaagagaaaagtttttgcatggaatgatcaaataaaa
gacgtaatcagcatgacatcatttggtagtagcatcttcgttcttcattcacaatgcatt
gttacagagattcaattgctttctttaaaagattttcttaaaacttttcatgatctagaa
gaatgggaaaaagttgccgaggttgcatgtaaatgcaaagaaaaaattcttcaaaatgtt
gaaacatttatttctattgatttttataaagcacaaaatcagcttgaaatggaaaagtta
ccatcaaagttcttacaagagtttcaaaactttgtgaaagactttgagcaaaaacatgtt
cagatatgcactgaaatagaaaaaaaaatgaatcaaaatatttctgaatgtaatcaagaa
gattacggtgatatccaatctacaaacgatgatatccaatctacaaacgatgatatccaa
tctactaagagtactaatgatgatattctatctacaaagagttctaacagtagaattagc
acatcaaagtttgatagttttatggaaaaagcaacaaataaaattgtaaaaaaggttgtt
gcttctggttttatgaaaaaagttatatatgatgcgttagagaatgaaggtgttcatata
aataaatctttacatgaaaatatcaaaaagacaaaaagtgttccgtcctcccctactcaa
tctcgaagtaatatttcagagtcatcaataaaatatgaagaaaaaacgcttaataaaatg
tacaatcaattaccagaacaccactcaatgccaaatattttttcaaatacagatactaat
gatattgtttatcaccgaatgcaaaagaagtcgaaaaaaaaaaaatcttcacaaaactgt
aataaaagatctactgatttcactgatagctcatctactgaaaatacatcctctgaaact
agtatgaatttgtcatcagaaagtgttacctgtgatactggtgaatcaattaatggaaat
tttattacaccgtcatttcgttttgaaatagaaacagaaccacctatttttttgttgaaa
ttgccaaataattatttccagattatcagcaaacttttaagtgttactgctaatactagt
aacaatttccgtgacacaaagattttgtacaacattaataatgtgaaaaaagtgcttaat
cattggtcaaaagagttatcctcagttactgttgaattccaagaagaagtttttaaatta
ttaaatgaaagtataaaaaatgcattgagtgatattattttatcttttatagacattgaa
agtaggtttcttcttttcaaacagctttcagctggttacagtgaaatttcaaatgtagca
atgctttgtttgcagacaagtatttttcctgaaaaatgtaaaatgccacataattatgaa
tttgctcttctcagttttgcattggactttgatacaatgagaaaaagtgcgcagcaagaa
gcaaaagaaataattaataagaaaaatgatttaatagattcagaaatggctgatgaaaat
caaaaaaatgctgtattaaaagaaatttcttcttcaacagacattagaagtacaatgaat
acatatgaatctttatgcttaagaatgttagtttcttctggtaatgattctgcatttgag
aaaaaatgtttctttggtgaaaacaaagataatgaaaatataagcttgtgtgaaggcttt
tcatctgataatatgacagaatgtgtttcttgtatacttgataaatgcagggcttgtttt
attctaagatattttcccatattaaactttgaaagaatgtattcacttttattatggaaa
ggtgggtgtcgatggagatcatggtgtgcatgtatggttcatttaaaagagctttacaag
catagcaatttatcaaaagcaattgcaaaaaatcaattaagtgttgaagaacttttaagc
agtactgtagaagattttctaggcaatatatctagactctatatagttgctcctcatctt
gtatcactttacataaaagaaggtcaatttacaaattgggaggtctcacttttgtataat
actggctatttaaaagatgcttccaatgatttcttattgtatgctgaaaatacttttttg
tcgttaagcatgcataaacttcatctacttttcttattgtgttgccttacgaactcactt
aatagtcagccatctatcttagatttgttttgtacatgtggtaaaccaagaccaagagca
aattctattgagtggaaataccagaagatactagtatctttgtttgattatcttgaggag
cttaagaaagatacacaaacctttttgttacttcaaggcatgagtaacttatgtttaaaa
cgtgggtactggacagggtgtattaagttactggtttggttgaacaaaataaatgatgct
gtcactttgttagttcaattacaagatgaggaaatttttatatgggttacaaaatctgga
tgcttgaatcttgatctatggtctaacctcctatacgaatgctcaaatcaatctgatgtt
gaaaaacacaattgtgaagttcttgatggattacactcgacattaaatcttgataaagtt
gtgcgcagtgctgctattgaaattggttgttttgctgtcctagaaattataaacaaattt
tgtattagtgtctctttagacctttacacatcattattacaagccttaagccatgaaaat
caacagaaaattgtggtagaaaagattctacaggtggctaatgataaagtatggactgat
aaaataaacaatgtacactccaagttagagaatgtaaaaaacaaagagttaattggaatt
gaatcaacgttcactggagaattcactgcagattttatcattaatgaatcagatagcatg
tggggaagaaatatcaatctttctgatacaacatgtccattatgcactttaccgttatgt
ataaaaacatcaagtactctaaatggaggtctaatattgtttccttgtggtcatatcttc
cataaaatttgtctaccagagcttgcttgtcttatttgcttctacaaacgttttacatca
ttgagttaa
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